RNA–Protein interactions for RNA: ENST00000494233.5

LPP-219, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-219ENST00000494233 NISCHQ9Y2I1 1504 aa14.77□□□□□ -0.04
LPP-219ENST00000494233 ABCC9O60706 1549 aa13.49□□□□□ -0.25
LPP-219ENST00000494233 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
LPP-219ENST00000494233 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
LPP-219ENST00000494233 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
LPP-219ENST00000494233 NACADO15069 1562 aa12.7□□□□□ -0.38
LPP-219ENST00000494233 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
LPP-219ENST00000494233 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
LPP-219ENST00000494233 MYO15BQ96JP2 1530 aa12.49□□□□□ -0.41
LPP-219ENST00000494233 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
LPP-219ENST00000494233 BICRAQ9NZM4 1560 aa12.34□□□□□ -0.43
LPP-219ENST00000494233 SHROOM4Q9ULL8 1493 aa12.31□□□□□ -0.44
LPP-219ENST00000494233 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
LPP-219ENST00000494233 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.46
LPP-219ENST00000494233 ZCCHC6Q5VYS8 1495 aaKnown RBP12.17□□□□□ -0.46
LPP-219ENST00000494233 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
LPP-219ENST00000494233 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
LPP-219ENST00000494233 SCRIBQ14160 1630 aa12.05□□□□□ -0.48
LPP-219ENST00000494233 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
LPP-219ENST00000494233 CUX2O14529 1486 aa11.77□□□□□ -0.52
LPP-219ENST00000494233 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
LPP-219ENST00000494233 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
LPP-219ENST00000494233 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
LPP-219ENST00000494233 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
LPP-219ENST00000494233 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
LPP-219ENST00000494233 SMARCA4P51532 1647 aa11.52□□□□□ -0.57
LPP-219ENST00000494233 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
LPP-219ENST00000494233 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
LPP-219ENST00000494233 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
LPP-219ENST00000494233 NESP48681 1621 aa11.49□□□□□ -0.57
LPP-219ENST00000494233 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
LPP-219ENST00000494233 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
LPP-219ENST00000494233 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
LPP-219ENST00000494233 CADPSQ9ULU8 1353 aa11.39□□□□□ -0.59
LPP-219ENST00000494233 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
LPP-219ENST00000494233 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
LPP-219ENST00000494233 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
LPP-219ENST00000494233 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
LPP-219ENST00000494233 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
LPP-219ENST00000494233 WDR62O43379 1518 aa11.26□□□□□ -0.61
LPP-219ENST00000494233 CEP164Q9UPV0 1460 aa11.24□□□□□ -0.61
LPP-219ENST00000494233 FANCD2Q9BXW9 1451 aa11.2□□□□□ -0.62
LPP-219ENST00000494233 CFTRP13569 1480 aa11.18□□□□□ -0.62
LPP-219ENST00000494233 WIZO95785 1651 aa11.16□□□□□ -0.62
LPP-219ENST00000494233 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
LPP-219ENST00000494233 URB2Q14146 1524 aaKnown RBP11.07□□□□□ -0.64
LPP-219ENST00000494233 TOP2AP11388 1531 aaKnown RBP11.06□□□□□ -0.64
LPP-219ENST00000494233 ABCC8Q09428 1581 aa11.05□□□□□ -0.64
LPP-219ENST00000494233 IFT140Q96RY7 1462 aa11.05□□□□□ -0.64
LPP-219ENST00000494233 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
LPP-219ENST00000494233 RIMBP3CA6NJZ7 1639 aa10.98□□□□□ -0.65
LPP-219ENST00000494233 RIMBP3BA6NNM3 1639 aa10.98□□□□□ -0.65
LPP-219ENST00000494233 RIMBP3Q9UFD9 1639 aa10.98□□□□□ -0.65
LPP-219ENST00000494233 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
LPP-219ENST00000494233 ARHGEF11O15085 1522 aa10.96□□□□□ -0.65
LPP-219ENST00000494233 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.65
LPP-219ENST00000494233 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
LPP-219ENST00000494233 ZNF608Q9ULD9 1512 aaPredicted RBP10.95□□□□□ -0.66
LPP-219ENST00000494233 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
LPP-219ENST00000494233 FBLN2P98095 1184 aa10.93□□□□□ -0.66
LPP-219ENST00000494233 DNMBPQ6XZF7 1577 aa10.89□□□□□ -0.67
LPP-219ENST00000494233 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.67
LPP-219ENST00000494233 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
LPP-219ENST00000494233 CHMP7Q8WUX9 453 aaPredicted RBP10.86□□□□□ -0.67
LPP-219ENST00000494233 SOGA1O94964 1423 aa10.85□□□□□ -0.67
LPP-219ENST00000494233 AEBP2Q6ZN18 517 aaPredicted RBP10.83□□□□□ -0.68
LPP-219ENST00000494233 TARBP1Q13395 1621 aaKnown RBP10.83□□□□□ -0.68
LPP-219ENST00000494233 POLA1P09884 1462 aaPredicted RBP10.81□□□□□ -0.68
LPP-219ENST00000494233 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
LPP-219ENST00000494233 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
LPP-219ENST00000494233 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
LPP-219ENST00000494233 CHD1O14646 1710 aa10.79□□□□□ -0.68
LPP-219ENST00000494233 MAGI1Q96QZ7 1491 aaPredicted RBP10.77□□□□□ -0.69
LPP-219ENST00000494233 RAD54L2Q9Y4B4 1467 aa10.77□□□□□ -0.69
LPP-219ENST00000494233 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
LPP-219ENST00000494233 GRIN2BQ13224 1484 aa10.75□□□□□ -0.69
LPP-219ENST00000494233 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
LPP-219ENST00000494233 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
LPP-219ENST00000494233 FGD5Q6ZNL6 1462 aa10.72□□□□□ -0.69
LPP-219ENST00000494233 CLASP1Q7Z460 1538 aa10.72□□□□□ -0.69
LPP-219ENST00000494233 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
LPP-219ENST00000494233 CUX1P39880 1505 aa10.65□□□□□ -0.7
LPP-219ENST00000494233 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
LPP-219ENST00000494233 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
LPP-219ENST00000494233 NPM1P06748 294 aaKnown RBP eCLIP10.59□□□□□ -0.71
LPP-219ENST00000494233 GRIN2AQ12879 1464 aa10.58□□□□□ -0.72
LPP-219ENST00000494233 PBRM1Q86U86 1689 aa10.57□□□□□ -0.72
LPP-219ENST00000494233 FHAD1B1AJZ9 1412 aa10.57□□□□□ -0.72
LPP-219ENST00000494233 NUP160Q12769 1436 aa10.56□□□□□ -0.72
LPP-219ENST00000494233 JPH4Q96JJ6 628 aa10.55□□□□□ -0.72
LPP-219ENST00000494233 ABCA5Q8WWZ7 1642 aa10.55□□□□□ -0.72
LPP-219ENST00000494233 CEP170Q5SW79 1584 aa10.52□□□□□ -0.73
LPP-219ENST00000494233 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
LPP-219ENST00000494233 ERICH3Q5RHP9 1530 aa10.5□□□□□ -0.73
LPP-219ENST00000494233 FAM69CQ0P6D2 419 aa10.5□□□□□ -0.73
LPP-219ENST00000494233 PRG4Q92954 1404 aaPredicted RBP10.5□□□□□ -0.73
LPP-219ENST00000494233 ADAMTS12P58397 1594 aa10.48□□□□□ -0.73
LPP-219ENST00000494233 ERCC6L2Q5T890 1561 aa10.48□□□□□ -0.73
LPP-219ENST00000494233 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
LPP-219ENST00000494233 TOP2BQ02880 1626 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms