RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 AEBP2Q6ZN18 517 aaPredicted RBP21.18■□□□□ 0.98
RN7SL538P-201ENST00000494227 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
RN7SL538P-201ENST00000494227 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
RN7SL538P-201ENST00000494227 ABCC9O60706 1549 aa19.3■□□□□ 0.68
RN7SL538P-201ENST00000494227 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
RN7SL538P-201ENST00000494227 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
RN7SL538P-201ENST00000494227 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
RN7SL538P-201ENST00000494227 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
RN7SL538P-201ENST00000494227 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
RN7SL538P-201ENST00000494227 NACADO15069 1562 aa17.96■□□□□ 0.46
RN7SL538P-201ENST00000494227 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
RN7SL538P-201ENST00000494227 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
RN7SL538P-201ENST00000494227 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
RN7SL538P-201ENST00000494227 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
RN7SL538P-201ENST00000494227 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
RN7SL538P-201ENST00000494227 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
RN7SL538P-201ENST00000494227 SCRIBQ14160 1630 aa17.39■□□□□ 0.38
RN7SL538P-201ENST00000494227 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
RN7SL538P-201ENST00000494227 CECR2Q9BXF3 1484 aa17.38■□□□□ 0.37
RN7SL538P-201ENST00000494227 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
RN7SL538P-201ENST00000494227 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
RN7SL538P-201ENST00000494227 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.36
RN7SL538P-201ENST00000494227 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
RN7SL538P-201ENST00000494227 FOXD1Q16676 465 aa16.74■□□□□ 0.27
RN7SL538P-201ENST00000494227 CUX2O14529 1486 aa16.68■□□□□ 0.26
RN7SL538P-201ENST00000494227 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
RN7SL538P-201ENST00000494227 NESP48681 1621 aa16.56■□□□□ 0.24
RN7SL538P-201ENST00000494227 NCAPD3P42695 1498 aa16.55■□□□□ 0.24
RN7SL538P-201ENST00000494227 ATAD2BQ9ULI0 1458 aa16.53■□□□□ 0.24
RN7SL538P-201ENST00000494227 SMARCA4P51532 1647 aa16.52■□□□□ 0.23
RN7SL538P-201ENST00000494227 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
RN7SL538P-201ENST00000494227 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
RN7SL538P-201ENST00000494227 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
RN7SL538P-201ENST00000494227 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
RN7SL538P-201ENST00000494227 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
RN7SL538P-201ENST00000494227 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
RN7SL538P-201ENST00000494227 PEG3Q9GZU2 1588 aa16.31■□□□□ 0.2
RN7SL538P-201ENST00000494227 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
RN7SL538P-201ENST00000494227 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
RN7SL538P-201ENST00000494227 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
RN7SL538P-201ENST00000494227 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
RN7SL538P-201ENST00000494227 WDR62O43379 1518 aa16.12■□□□□ 0.17
RN7SL538P-201ENST00000494227 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
RN7SL538P-201ENST00000494227 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
RN7SL538P-201ENST00000494227 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
RN7SL538P-201ENST00000494227 WIZO95785 1651 aa16.06■□□□□ 0.16
RN7SL538P-201ENST00000494227 CADPSQ9ULU8 1353 aa16.02■□□□□ 0.16
RN7SL538P-201ENST00000494227 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
RN7SL538P-201ENST00000494227 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.14
RN7SL538P-201ENST00000494227 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
RN7SL538P-201ENST00000494227 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
RN7SL538P-201ENST00000494227 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
RN7SL538P-201ENST00000494227 CFTRP13569 1480 aa15.84■□□□□ 0.13
RN7SL538P-201ENST00000494227 ADRA2BP18089 450 aa15.82■□□□□ 0.12
RN7SL538P-201ENST00000494227 RIMBP3CA6NJZ7 1639 aa15.82■□□□□ 0.12
RN7SL538P-201ENST00000494227 RIMBP3BA6NNM3 1639 aa15.82■□□□□ 0.12
RN7SL538P-201ENST00000494227 RIMBP3Q9UFD9 1639 aa15.82■□□□□ 0.12
RN7SL538P-201ENST00000494227 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
RN7SL538P-201ENST00000494227 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
RN7SL538P-201ENST00000494227 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
RN7SL538P-201ENST00000494227 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
RN7SL538P-201ENST00000494227 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
RN7SL538P-201ENST00000494227 PIAS4Q8N2W9 510 aaPredicted RBP15.7■□□□□ 0.1
RN7SL538P-201ENST00000494227 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
RN7SL538P-201ENST00000494227 CHD1O14646 1710 aa15.64■□□□□ 0.09
RN7SL538P-201ENST00000494227 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
RN7SL538P-201ENST00000494227 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
RN7SL538P-201ENST00000494227 MSH5O43196 834 aa15.57■□□□□ 0.08
RN7SL538P-201ENST00000494227 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
RN7SL538P-201ENST00000494227 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
RN7SL538P-201ENST00000494227 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
RN7SL538P-201ENST00000494227 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
RN7SL538P-201ENST00000494227 AQRO60306 1485 aaKnown RBP eCLIP15.48■□□□□ 0.07
RN7SL538P-201ENST00000494227 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
RN7SL538P-201ENST00000494227 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
RN7SL538P-201ENST00000494227 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
RN7SL538P-201ENST00000494227 CLASP1Q7Z460 1538 aa15.4■□□□□ 0.06
RN7SL538P-201ENST00000494227 ABCC8Q09428 1581 aa15.38■□□□□ 0.05
RN7SL538P-201ENST00000494227 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
RN7SL538P-201ENST00000494227 WDR97A6NE52 1622 aa15.33■□□□□ 0.04
RN7SL538P-201ENST00000494227 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
RN7SL538P-201ENST00000494227 FBLN2P98095 1184 aa15.32■□□□□ 0.04
RN7SL538P-201ENST00000494227 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
RN7SL538P-201ENST00000494227 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
RN7SL538P-201ENST00000494227 CUX1P39880 1505 aa15.28■□□□□ 0.04
RN7SL538P-201ENST00000494227 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
RN7SL538P-201ENST00000494227 SYNJ1O43426 1573 aa15.27■□□□□ 0.03
RN7SL538P-201ENST00000494227 SOGA1O94964 1423 aa15.24■□□□□ 0.03
RN7SL538P-201ENST00000494227 MAGI1Q96QZ7 1491 aaPredicted RBP15.23■□□□□ 0.03
RN7SL538P-201ENST00000494227 ERCC6L2Q5T890 1561 aa15.2■□□□□ 0.02
RN7SL538P-201ENST00000494227 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
RN7SL538P-201ENST00000494227 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
RN7SL538P-201ENST00000494227 ABCA5Q8WWZ7 1642 aa15.18■□□□□ 0.02
RN7SL538P-201ENST00000494227 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
RN7SL538P-201ENST00000494227 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
RN7SL538P-201ENST00000494227 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
RN7SL538P-201ENST00000494227 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
RN7SL538P-201ENST00000494227 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
RN7SL538P-201ENST00000494227 KIF13AQ9H1H9 1805 aa15.06■□□□□ 0
RN7SL538P-201ENST00000494227 GRIN2AQ12879 1464 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms