RNA–Protein interactions for RNA: ENST00000494145.1

RASSF1-209, Transcript of Ras association domain family member 1, humanhuman

TSL 1 (best)

Gene RASSF1, Length 1,358 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF1-209ENST00000494145 NISCHQ9Y2I1 1504 aa54.59■■■■■ 6.33
RASSF1-209ENST00000494145 CCDC180Q9P1Z9 1646 aa48.63■■■■■ 5.38
RASSF1-209ENST00000494145 ABCC9O60706 1549 aa47.86■■■■■ 5.25
RASSF1-209ENST00000494145 RB1CC1Q8TDY2 1594 aa45.95■■■■■ 4.95
RASSF1-209ENST00000494145 NACADO15069 1562 aa45.83■■■■■ 4.93
RASSF1-209ENST00000494145 DCAF8L2P0C7V8 631 aa45.78■■■■■ 4.92
RASSF1-209ENST00000494145 MYO15BQ96JP2 1530 aa45.48■■■■■ 4.87
RASSF1-209ENST00000494145 ZCCHC6Q5VYS8 1495 aaKnown RBP45.41■■■■■ 4.86
RASSF1-209ENST00000494145 DCAF1Q9Y4B6 1507 aa45.17■■■■■ 4.82
RASSF1-209ENST00000494145 UNC13AQ9UPW8 1703 aa44.77■■■■■ 4.76
RASSF1-209ENST00000494145 DNAJC5BQ9UF47 199 aa44.72■■■■■ 4.75
RASSF1-209ENST00000494145 PABPN1Q86U42 306 aaKnown RBP eCLIP44.68■■■■■ 4.74
RASSF1-209ENST00000494145 BICRAQ9NZM4 1560 aa44.49■■■■■ 4.71
RASSF1-209ENST00000494145 SCRIBQ14160 1630 aa44.33■■■■■ 4.69
RASSF1-209ENST00000494145 SHROOM4Q9ULL8 1493 aa44.11■■■■■ 4.65
RASSF1-209ENST00000494145 EIF4G1Q04637 1599 aaKnown RBP43.38■■■■■ 4.53
RASSF1-209ENST00000494145 CC2D2AQ9P2K1 1620 aa43.25■■■■■ 4.51
RASSF1-209ENST00000494145 CECR2Q9BXF3 1484 aa43.05■■■■■ 4.48
RASSF1-209ENST00000494145 SMARCA4P51532 1647 aa42.39■■■■■ 4.38
RASSF1-209ENST00000494145 BAZ1AQ9NRL2 1556 aaPredicted RBP42.35■■■■■ 4.37
RASSF1-209ENST00000494145 NCAPD3P42695 1498 aa42.3■■■■■ 4.36
RASSF1-209ENST00000494145 ATAD2BQ9ULI0 1458 aa42.26■■■■■ 4.36
RASSF1-209ENST00000494145 SMARCA2P51531 1590 aa42.22■■■■■ 4.35
RASSF1-209ENST00000494145 HMGXB3Q12766 1538 aa42.05■■■■■ 4.32
RASSF1-209ENST00000494145 MROH2BQ7Z745 1585 aa42.04■■■■■ 4.32
RASSF1-209ENST00000494145 PEG3Q9GZU2 1588 aa41.99■■■■■ 4.31
RASSF1-209ENST00000494145 BAZ1BQ9UIG0 1483 aaKnown RBP41.91■■■■■ 4.3
RASSF1-209ENST00000494145 WIZO95785 1651 aa41.55■■■■■ 4.24
RASSF1-209ENST00000494145 RSF1Q96T23 1441 aaPredicted RBP41.48■■■■■ 4.23
RASSF1-209ENST00000494145 ERCC6Q03468 1493 aa41.32■■■■■ 4.21
RASSF1-209ENST00000494145 NESP48681 1621 aa41.3■■■■■ 4.2
RASSF1-209ENST00000494145 LAMC3Q9Y6N6 1575 aa41.22■■■■■ 4.19
RASSF1-209ENST00000494145 TOP2AP11388 1531 aaKnown RBP41.14■■■■■ 4.18
RASSF1-209ENST00000494145 DNAJC5Q9H3Z4 198 aa41.07■■■■■ 4.16
RASSF1-209ENST00000494145 CADPSQ9ULU8 1353 aa41.06■■■■■ 4.16
RASSF1-209ENST00000494145 PDS5BQ9NTI5 1447 aa40.99■■■■■ 4.15
RASSF1-209ENST00000494145 CUX2O14529 1486 aa40.97■■■■■ 4.15
RASSF1-209ENST00000494145 KIF21AQ7Z4S6 1674 aa40.78■■■■■ 4.12
RASSF1-209ENST00000494145 CFTRP13569 1480 aa40.74■■■■■ 4.11
RASSF1-209ENST00000494145 THOC2Q8NI27 1593 aaKnown RBP40.73■■■■■ 4.11
RASSF1-209ENST00000494145 CCDC88BA6NC98 1476 aa40.65■■■■■ 4.1
RASSF1-209ENST00000494145 FANCD2Q9BXW9 1451 aa40.57■■■■■ 4.09
RASSF1-209ENST00000494145 CEP164Q9UPV0 1460 aa40.56■■■■■ 4.08
RASSF1-209ENST00000494145 MRC2Q9UBG0 1479 aa40.55■■■■■ 4.08
RASSF1-209ENST00000494145 WDR62O43379 1518 aa40.4■■■■■ 4.06
RASSF1-209ENST00000494145 PRDM2Q13029 1718 aa40.33■■■■■ 4.05
RASSF1-209ENST00000494145 SUPT5HO00267 1087 aaKnown RBP40.26■■■■■ 4.04
RASSF1-209ENST00000494145 URB2Q14146 1524 aaKnown RBP40.14■■■■■ 4.02
RASSF1-209ENST00000494145 ABCC8Q09428 1581 aa39.92■■■■□ 3.98
RASSF1-209ENST00000494145 TOPBP1Q92547 1522 aa39.88■■■■□ 3.97
RASSF1-209ENST00000494145 DNMBPQ6XZF7 1577 aa39.81■■■■□ 3.96
RASSF1-209ENST00000494145 IFT140Q96RY7 1462 aa39.72■■■■□ 3.95
RASSF1-209ENST00000494145 POLA1P09884 1462 aaPredicted RBP39.52■■■■□ 3.92
RASSF1-209ENST00000494145 ZNF608Q9ULD9 1512 aaPredicted RBP39.51■■■■□ 3.92
RASSF1-209ENST00000494145 CUX1P39880 1505 aa39.45■■■■□ 3.91
RASSF1-209ENST00000494145 TARBP1Q13395 1621 aaKnown RBP39.43■■■■□ 3.9
RASSF1-209ENST00000494145 FGD5Q6ZNL6 1462 aa39.39■■■■□ 3.9
RASSF1-209ENST00000494145 SOGA1O94964 1423 aa39.38■■■■□ 3.9
RASSF1-209ENST00000494145 EIF4G3O43432 1585 aaKnown RBP39.34■■■■□ 3.89
RASSF1-209ENST00000494145 RAD54L2Q9Y4B4 1467 aa39.33■■■■□ 3.89
RASSF1-209ENST00000494145 TRIM41Q8WV44 630 aa39.3■■■■□ 3.88
RASSF1-209ENST00000494145 AQRO60306 1485 aaKnown RBP eCLIP39.28■■■■□ 3.884e-7■□□□□ 11.2
RASSF1-209ENST00000494145 OSCARQ8IYS5 282 aa39.28■■■■□ 3.88
RASSF1-209ENST00000494145 TDRD9Q8NDG6 1382 aaKnown RBP39.17■■■■□ 3.86
RASSF1-209ENST00000494145 WDR97A6NE52 1622 aa39.16■■■■□ 3.86
RASSF1-209ENST00000494145 WRNQ14191 1432 aaPredicted RBP eCLIP39.15■■■■□ 3.86
RASSF1-209ENST00000494145 TOP2BQ02880 1626 aa39.06■■■■□ 3.84
RASSF1-209ENST00000494145 BIVM-ERCC5R4GMW8 1640 aa39.04■■■■□ 3.84
RASSF1-209ENST00000494145 ABCA10Q8WWZ4 1543 aa39■■■■□ 3.83
RASSF1-209ENST00000494145 SYNJ1O43426 1573 aa39■■■■□ 3.83
RASSF1-209ENST00000494145 GRIN2BQ13224 1484 aa38.96■■■■□ 3.83
RASSF1-209ENST00000494145 FBLN2P98095 1184 aa38.92■■■■□ 3.82
RASSF1-209ENST00000494145 GAPVD1Q14C86 1478 aa38.91■■■■□ 3.82
RASSF1-209ENST00000494145 SNAPC4Q5SXM2 1469 aa38.91■■■■□ 3.82
RASSF1-209ENST00000494145 MAGI1Q96QZ7 1491 aaPredicted RBP38.88■■■■□ 3.82
RASSF1-209ENST00000494145 CHD1O14646 1710 aa38.87■■■■□ 3.81
RASSF1-209ENST00000494145 ABCA5Q8WWZ7 1642 aa38.84■■■■□ 3.81
RASSF1-209ENST00000494145 PBRM1Q86U86 1689 aa38.79■■■■□ 3.8
RASSF1-209ENST00000494145 CHMP7Q8WUX9 453 aaPredicted RBP38.78■■■■□ 3.8
RASSF1-209ENST00000494145 SYNJ2O15056 1496 aa38.73■■■■□ 3.79
RASSF1-209ENST00000494145 ARHGEF11O15085 1522 aa38.57■■■■□ 3.76
RASSF1-209ENST00000494145 RIMBP3CA6NJZ7 1639 aa38.57■■■■□ 3.76
RASSF1-209ENST00000494145 RIMBP3BA6NNM3 1639 aa38.57■■■■□ 3.76
RASSF1-209ENST00000494145 RIMBP3Q9UFD9 1639 aa38.57■■■■□ 3.76
RASSF1-209ENST00000494145 ERICH3Q5RHP9 1530 aa38.55■■■■□ 3.76
RASSF1-209ENST00000494145 ADAMTS12P58397 1594 aa38.49■■■■□ 3.75
RASSF1-209ENST00000494145 CLASP1Q7Z460 1538 aa38.48■■■■□ 3.75
RASSF1-209ENST00000494145 FHAD1B1AJZ9 1412 aa38.47■■■■□ 3.75
RASSF1-209ENST00000494145 GRIN2AQ12879 1464 aa38.44■■■■□ 3.74
RASSF1-209ENST00000494145 KIF27Q86VH2 1401 aa38.38■■■■□ 3.73
RASSF1-209ENST00000494145 CYB5RLQ6IPT4 315 aa38.36■■■■□ 3.73
RASSF1-209ENST00000494145 NUP160Q12769 1436 aa38.28■■■■□ 3.72
RASSF1-209ENST00000494145 IGF1RP08069 1367 aa38.22■■■■□ 3.71
RASSF1-209ENST00000494145 ARAP1Q96P48 1450 aa38.22■■■■□ 3.71
RASSF1-209ENST00000494145 CEP170Q5SW79 1584 aa38.22■■■■□ 3.71
RASSF1-209ENST00000494145 CUL7Q14999 1698 aa38.12■■■■□ 3.69
RASSF1-209ENST00000494145 CARMIL1Q5VZK9 1371 aa38.01■■■■□ 3.68
RASSF1-209ENST00000494145 SHROOM2Q13796 1616 aa37.99■■■■□ 3.67
RASSF1-209ENST00000494145 TRHP20396 242 aaPredicted RBP37.95■■■■□ 3.67
RASSF1-209ENST00000494145 RUSC2Q8N2Y8 1516 aa37.93■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms