RNA–Protein interactions for RNA: ENST00000494136.1

LAMTOR4-212, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, humanhuman

TSL 2

Gene LAMTOR4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR4-212ENST00000494136 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
LAMTOR4-212ENST00000494136 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
LAMTOR4-212ENST00000494136 ABCC9O60706 1549 aa18.01■□□□□ 0.47
LAMTOR4-212ENST00000494136 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
LAMTOR4-212ENST00000494136 NACADO15069 1562 aa17.36■□□□□ 0.37
LAMTOR4-212ENST00000494136 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
LAMTOR4-212ENST00000494136 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
LAMTOR4-212ENST00000494136 DCAF8L2P0C7V8 631 aa17.16■□□□□ 0.34
LAMTOR4-212ENST00000494136 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
LAMTOR4-212ENST00000494136 UNC13AQ9UPW8 1703 aa17.03■□□□□ 0.32
LAMTOR4-212ENST00000494136 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
LAMTOR4-212ENST00000494136 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
LAMTOR4-212ENST00000494136 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
LAMTOR4-212ENST00000494136 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
LAMTOR4-212ENST00000494136 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
LAMTOR4-212ENST00000494136 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
LAMTOR4-212ENST00000494136 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
LAMTOR4-212ENST00000494136 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
LAMTOR4-212ENST00000494136 SMARCA4P51532 1647 aa16.08■□□□□ 0.16
LAMTOR4-212ENST00000494136 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
LAMTOR4-212ENST00000494136 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
LAMTOR4-212ENST00000494136 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
LAMTOR4-212ENST00000494136 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
LAMTOR4-212ENST00000494136 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
LAMTOR4-212ENST00000494136 PEG3Q9GZU2 1588 aa15.91■□□□□ 0.14
LAMTOR4-212ENST00000494136 BAZ1BQ9UIG0 1483 aaKnown RBP15.86■□□□□ 0.13
LAMTOR4-212ENST00000494136 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
LAMTOR4-212ENST00000494136 WIZO95785 1651 aa15.73■□□□□ 0.11
LAMTOR4-212ENST00000494136 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
LAMTOR4-212ENST00000494136 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
LAMTOR4-212ENST00000494136 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
LAMTOR4-212ENST00000494136 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
LAMTOR4-212ENST00000494136 NESP48681 1621 aa15.53■□□□□ 0.08
LAMTOR4-212ENST00000494136 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
LAMTOR4-212ENST00000494136 CUX2O14529 1486 aa15.48■□□□□ 0.07
LAMTOR4-212ENST00000494136 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
LAMTOR4-212ENST00000494136 PRDM2Q13029 1718 aa15.46■□□□□ 0.07
LAMTOR4-212ENST00000494136 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
LAMTOR4-212ENST00000494136 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
LAMTOR4-212ENST00000494136 CFTRP13569 1480 aa15.36■□□□□ 0.05
LAMTOR4-212ENST00000494136 CEP164Q9UPV0 1460 aa15.36■□□□□ 0.05
LAMTOR4-212ENST00000494136 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
LAMTOR4-212ENST00000494136 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
LAMTOR4-212ENST00000494136 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
LAMTOR4-212ENST00000494136 WDR62O43379 1518 aa15.28■□□□□ 0.04
LAMTOR4-212ENST00000494136 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
LAMTOR4-212ENST00000494136 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
LAMTOR4-212ENST00000494136 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
LAMTOR4-212ENST00000494136 DNMBPQ6XZF7 1577 aa15.1■□□□□ 0.01
LAMTOR4-212ENST00000494136 TOPBP1Q92547 1522 aa15.06■□□□□ 0
LAMTOR4-212ENST00000494136 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
LAMTOR4-212ENST00000494136 EIF4G3O43432 1585 aaKnown RBP14.94□□□□□ -0.02
LAMTOR4-212ENST00000494136 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
LAMTOR4-212ENST00000494136 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
LAMTOR4-212ENST00000494136 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
LAMTOR4-212ENST00000494136 WDR97A6NE52 1622 aa14.92□□□□□ -0.02
LAMTOR4-212ENST00000494136 CUX1P39880 1505 aa14.9□□□□□ -0.02
LAMTOR4-212ENST00000494136 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
LAMTOR4-212ENST00000494136 ZNF608Q9ULD9 1512 aaPredicted RBP14.86□□□□□ -0.03
LAMTOR4-212ENST00000494136 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
LAMTOR4-212ENST00000494136 SOGA1O94964 1423 aa14.83□□□□□ -0.03
LAMTOR4-212ENST00000494136 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
LAMTOR4-212ENST00000494136 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
LAMTOR4-212ENST00000494136 PBRM1Q86U86 1689 aa14.79□□□□□ -0.04
LAMTOR4-212ENST00000494136 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
LAMTOR4-212ENST00000494136 CHD1O14646 1710 aa14.78□□□□□ -0.04
LAMTOR4-212ENST00000494136 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
LAMTOR4-212ENST00000494136 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.052e-10■■■■□ 22.9
LAMTOR4-212ENST00000494136 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
LAMTOR4-212ENST00000494136 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
LAMTOR4-212ENST00000494136 GRIN2BQ13224 1484 aa14.72□□□□□ -0.05
LAMTOR4-212ENST00000494136 MAGI1Q96QZ7 1491 aaPredicted RBP14.72□□□□□ -0.05
LAMTOR4-212ENST00000494136 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
LAMTOR4-212ENST00000494136 TDRD9Q8NDG6 1382 aaKnown RBP14.71□□□□□ -0.06
LAMTOR4-212ENST00000494136 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
LAMTOR4-212ENST00000494136 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
LAMTOR4-212ENST00000494136 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
LAMTOR4-212ENST00000494136 FBLN2P98095 1184 aa14.62□□□□□ -0.07
LAMTOR4-212ENST00000494136 ADAMTS12P58397 1594 aa14.61□□□□□ -0.07
LAMTOR4-212ENST00000494136 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
LAMTOR4-212ENST00000494136 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
LAMTOR4-212ENST00000494136 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.08
LAMTOR4-212ENST00000494136 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.08
LAMTOR4-212ENST00000494136 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.08
LAMTOR4-212ENST00000494136 ARHGEF11O15085 1522 aa14.55□□□□□ -0.08
LAMTOR4-212ENST00000494136 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
LAMTOR4-212ENST00000494136 CUL7Q14999 1698 aa14.54□□□□□ -0.08
LAMTOR4-212ENST00000494136 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
LAMTOR4-212ENST00000494136 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.08
LAMTOR4-212ENST00000494136 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
LAMTOR4-212ENST00000494136 CEP170Q5SW79 1584 aa14.46□□□□□ -0.09
LAMTOR4-212ENST00000494136 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
LAMTOR4-212ENST00000494136 NUP160Q12769 1436 aa14.43□□□□□ -0.1
LAMTOR4-212ENST00000494136 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
LAMTOR4-212ENST00000494136 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
LAMTOR4-212ENST00000494136 ARAP1Q96P48 1450 aa14.39□□□□□ -0.11
LAMTOR4-212ENST00000494136 IGF1RP08069 1367 aa14.34□□□□□ -0.11
LAMTOR4-212ENST00000494136 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
LAMTOR4-212ENST00000494136 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
LAMTOR4-212ENST00000494136 KIAA0586Q9BVV6 1533 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms