RNA–Protein interactions for RNA: ENST00000494096.1

C3orf52-206, Transcript of chromosome 3 open reading frame 52, humanhuman

TSL 4

Gene C3orf52, Length 567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf52-206ENST00000494096 NISCHQ9Y2I1 1504 aa35.08■■■■□ 3.21
C3orf52-206ENST00000494096 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.59
C3orf52-206ENST00000494096 ABCC9O60706 1549 aa30.14■■■□□ 2.42
C3orf52-206ENST00000494096 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
C3orf52-206ENST00000494096 NACADO15069 1562 aa29.23■■■□□ 2.27
C3orf52-206ENST00000494096 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.26
C3orf52-206ENST00000494096 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
C3orf52-206ENST00000494096 DCAF1Q9Y4B6 1507 aa29.12■■■□□ 2.25
C3orf52-206ENST00000494096 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
C3orf52-206ENST00000494096 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
C3orf52-206ENST00000494096 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
C3orf52-206ENST00000494096 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
C3orf52-206ENST00000494096 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
C3orf52-206ENST00000494096 PABPN1Q86U42 306 aaKnown RBP eCLIP28.11■■■□□ 2.09
C3orf52-206ENST00000494096 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
C3orf52-206ENST00000494096 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
C3orf52-206ENST00000494096 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
C3orf52-206ENST00000494096 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
C3orf52-206ENST00000494096 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
C3orf52-206ENST00000494096 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
C3orf52-206ENST00000494096 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.91
C3orf52-206ENST00000494096 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
C3orf52-206ENST00000494096 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
C3orf52-206ENST00000494096 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
C3orf52-206ENST00000494096 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
C3orf52-206ENST00000494096 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
C3orf52-206ENST00000494096 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
C3orf52-206ENST00000494096 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
C3orf52-206ENST00000494096 WIZO95785 1651 aa26.73■■□□□ 1.87
C3orf52-206ENST00000494096 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
C3orf52-206ENST00000494096 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
C3orf52-206ENST00000494096 NESP48681 1621 aa26.14■■□□□ 1.78
C3orf52-206ENST00000494096 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
C3orf52-206ENST00000494096 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
C3orf52-206ENST00000494096 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
C3orf52-206ENST00000494096 CFTRP13569 1480 aa26.05■■□□□ 1.76
C3orf52-206ENST00000494096 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
C3orf52-206ENST00000494096 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
C3orf52-206ENST00000494096 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
C3orf52-206ENST00000494096 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
C3orf52-206ENST00000494096 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
C3orf52-206ENST00000494096 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
C3orf52-206ENST00000494096 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
C3orf52-206ENST00000494096 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
C3orf52-206ENST00000494096 CUX2O14529 1486 aa25.72■■□□□ 1.71
C3orf52-206ENST00000494096 WDR62O43379 1518 aa25.68■■□□□ 1.7
C3orf52-206ENST00000494096 URB2Q14146 1524 aaKnown RBP25.56■■□□□ 1.68
C3orf52-206ENST00000494096 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
C3orf52-206ENST00000494096 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
C3orf52-206ENST00000494096 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
C3orf52-206ENST00000494096 CUX1P39880 1505 aa25.34■■□□□ 1.65
C3orf52-206ENST00000494096 POLA1P09884 1462 aaPredicted RBP25.26■■□□□ 1.63
C3orf52-206ENST00000494096 IFT140Q96RY7 1462 aa25.26■■□□□ 1.63
C3orf52-206ENST00000494096 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
C3orf52-206ENST00000494096 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
C3orf52-206ENST00000494096 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
C3orf52-206ENST00000494096 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
C3orf52-206ENST00000494096 TARBP1Q13395 1621 aaKnown RBP25.2■■□□□ 1.62
C3orf52-206ENST00000494096 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
C3orf52-206ENST00000494096 WDR97A6NE52 1622 aa25.1■■□□□ 1.61
C3orf52-206ENST00000494096 SOGA1O94964 1423 aa25.1■■□□□ 1.61
C3orf52-206ENST00000494096 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.6
C3orf52-206ENST00000494096 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
C3orf52-206ENST00000494096 EIF4G3O43432 1585 aaKnown RBP25.06■■□□□ 1.6
C3orf52-206ENST00000494096 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
C3orf52-206ENST00000494096 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
C3orf52-206ENST00000494096 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.58
C3orf52-206ENST00000494096 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
C3orf52-206ENST00000494096 PBRM1Q86U86 1689 aa24.86■■□□□ 1.57
C3orf52-206ENST00000494096 GAPVD1Q14C86 1478 aa24.85■■□□□ 1.57
C3orf52-206ENST00000494096 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
C3orf52-206ENST00000494096 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
C3orf52-206ENST00000494096 SNAPC4Q5SXM2 1469 aa24.76■■□□□ 1.55
C3orf52-206ENST00000494096 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
C3orf52-206ENST00000494096 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
C3orf52-206ENST00000494096 CHD1O14646 1710 aa24.7■■□□□ 1.54
C3orf52-206ENST00000494096 TRIM41Q8WV44 630 aa24.69■■□□□ 1.54
C3orf52-206ENST00000494096 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
C3orf52-206ENST00000494096 SYNJ2O15056 1496 aa24.66■■□□□ 1.54
C3orf52-206ENST00000494096 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
C3orf52-206ENST00000494096 CUL7Q14999 1698 aa24.59■■□□□ 1.53
C3orf52-206ENST00000494096 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
C3orf52-206ENST00000494096 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
C3orf52-206ENST00000494096 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
C3orf52-206ENST00000494096 IGF1RP08069 1367 aa24.53■■□□□ 1.52
C3orf52-206ENST00000494096 GRIN2AQ12879 1464 aa24.52■■□□□ 1.52
C3orf52-206ENST00000494096 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
C3orf52-206ENST00000494096 FBLN2P98095 1184 aa24.5■■□□□ 1.51
C3orf52-206ENST00000494096 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
C3orf52-206ENST00000494096 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.5
C3orf52-206ENST00000494096 NUP160Q12769 1436 aa24.43■■□□□ 1.5
C3orf52-206ENST00000494096 EEA1Q15075 1411 aa24.42■■□□□ 1.5
C3orf52-206ENST00000494096 CEP170Q5SW79 1584 aa24.4■■□□□ 1.5
C3orf52-206ENST00000494096 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
C3orf52-206ENST00000494096 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
C3orf52-206ENST00000494096 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
C3orf52-206ENST00000494096 SHROOM2Q13796 1616 aa24.26■■□□□ 1.47
C3orf52-206ENST00000494096 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
C3orf52-206ENST00000494096 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
C3orf52-206ENST00000494096 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms