RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-222ENST00000494046 NISCHQ9Y2I1 1504 aa46.27■■■■■ 5
ABCA2-222ENST00000494046 CCDC180Q9P1Z9 1646 aa41.26■■■■■ 4.2
ABCA2-222ENST00000494046 ABCC9O60706 1549 aa41.04■■■■■ 4.16
ABCA2-222ENST00000494046 RB1CC1Q8TDY2 1594 aa39.13■■■■□ 3.86
ABCA2-222ENST00000494046 DCAF8L2P0C7V8 631 aa39.06■■■■□ 3.84
ABCA2-222ENST00000494046 NACADO15069 1562 aa38.95■■■■□ 3.83
ABCA2-222ENST00000494046 MYO15BQ96JP2 1530 aa38.49■■■■□ 3.75
ABCA2-222ENST00000494046 ZCCHC6Q5VYS8 1495 aaKnown RBP38.43■■■■□ 3.74
ABCA2-222ENST00000494046 PABPN1Q86U42 306 aaKnown RBP eCLIP38.33■■■■□ 3.73
ABCA2-222ENST00000494046 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
ABCA2-222ENST00000494046 DCAF1Q9Y4B6 1507 aa38.17■■■■□ 3.7
ABCA2-222ENST00000494046 DNAJC5BQ9UF47 199 aa38.17■■■■□ 3.7
ABCA2-222ENST00000494046 BICRAQ9NZM4 1560 aa38.01■■■■□ 3.68
ABCA2-222ENST00000494046 SCRIBQ14160 1630 aa37.76■■■■□ 3.63
ABCA2-222ENST00000494046 SHROOM4Q9ULL8 1493 aa37.42■■■■□ 3.58
ABCA2-222ENST00000494046 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
ABCA2-222ENST00000494046 CC2D2AQ9P2K1 1620 aa37.03■■■■□ 3.52
ABCA2-222ENST00000494046 CECR2Q9BXF3 1484 aa36.89■■■■□ 3.5
ABCA2-222ENST00000494046 SMARCA4P51532 1647 aa36■■■■□ 3.35
ABCA2-222ENST00000494046 NCAPD3P42695 1498 aa35.98■■■■□ 3.35
ABCA2-222ENST00000494046 ATAD2BQ9ULI0 1458 aa35.96■■■■□ 3.35
ABCA2-222ENST00000494046 BAZ1AQ9NRL2 1556 aaPredicted RBP35.87■■■■□ 3.33
ABCA2-222ENST00000494046 SMARCA2P51531 1590 aa35.84■■■■□ 3.33
ABCA2-222ENST00000494046 HMGXB3Q12766 1538 aa35.72■■■■□ 3.31
ABCA2-222ENST00000494046 MROH2BQ7Z745 1585 aa35.7■■■■□ 3.31
ABCA2-222ENST00000494046 BAZ1BQ9UIG0 1483 aaKnown RBP35.64■■■■□ 3.3
ABCA2-222ENST00000494046 PEG3Q9GZU2 1588 aa35.6■■■■□ 3.29
ABCA2-222ENST00000494046 ERCC6Q03468 1493 aa35.38■■■■□ 3.25
ABCA2-222ENST00000494046 NESP48681 1621 aa35.37■■■■□ 3.25
ABCA2-222ENST00000494046 WIZO95785 1651 aa35.29■■■■□ 3.24
ABCA2-222ENST00000494046 RSF1Q96T23 1441 aaPredicted RBP35.11■■■■□ 3.21
ABCA2-222ENST00000494046 CUX2O14529 1486 aa35.1■■■■□ 3.21
ABCA2-222ENST00000494046 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
ABCA2-222ENST00000494046 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
ABCA2-222ENST00000494046 PDS5BQ9NTI5 1447 aa34.9■■■■□ 3.18
ABCA2-222ENST00000494046 KIF21AQ7Z4S6 1674 aa34.87■■■■□ 3.17
ABCA2-222ENST00000494046 THOC2Q8NI27 1593 aaKnown RBP34.85■■■■□ 3.17
ABCA2-222ENST00000494046 TOP2AP11388 1531 aaKnown RBP34.83■■■■□ 3.17
ABCA2-222ENST00000494046 DNAJC5Q9H3Z4 198 aa34.69■■■■□ 3.14
ABCA2-222ENST00000494046 CFTRP13569 1480 aa34.6■■■■□ 3.13
ABCA2-222ENST00000494046 MRC2Q9UBG0 1479 aa34.58■■■■□ 3.13
ABCA2-222ENST00000494046 FANCD2Q9BXW9 1451 aa34.55■■■■□ 3.12
ABCA2-222ENST00000494046 CEP164Q9UPV0 1460 aa34.54■■■■□ 3.12
ABCA2-222ENST00000494046 CCDC88BA6NC98 1476 aa34.48■■■■□ 3.11
ABCA2-222ENST00000494046 WDR62O43379 1518 aa34.46■■■■□ 3.11
ABCA2-222ENST00000494046 URB2Q14146 1524 aaKnown RBP34.24■■■■□ 3.07
ABCA2-222ENST00000494046 PRDM2Q13029 1718 aa34.21■■■■□ 3.07
ABCA2-222ENST00000494046 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
ABCA2-222ENST00000494046 TOPBP1Q92547 1522 aa33.93■■■■□ 3.02
ABCA2-222ENST00000494046 ABCC8Q09428 1581 aa33.82■■■■□ 3
ABCA2-222ENST00000494046 IFT140Q96RY7 1462 aa33.82■■■■□ 3
ABCA2-222ENST00000494046 DNMBPQ6XZF7 1577 aa33.82■■■■□ 3
ABCA2-222ENST00000494046 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
ABCA2-222ENST00000494046 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
ABCA2-222ENST00000494046 POLA1P09884 1462 aaPredicted RBP33.62■■■□□ 2.97
ABCA2-222ENST00000494046 TARBP1Q13395 1621 aaKnown RBP33.58■■■□□ 2.97
ABCA2-222ENST00000494046 EIF4G3O43432 1585 aaKnown RBP33.57■■■□□ 2.96
ABCA2-222ENST00000494046 AQRO60306 1485 aaKnown RBP eCLIP33.55■■■□□ 2.964e-7■■■□□ 16.7
ABCA2-222ENST00000494046 RAD54L2Q9Y4B4 1467 aa33.54■■■□□ 2.96
ABCA2-222ENST00000494046 CUX1P39880 1505 aa33.51■■■□□ 2.95
ABCA2-222ENST00000494046 SOGA1O94964 1423 aa33.49■■■□□ 2.95
ABCA2-222ENST00000494046 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
ABCA2-222ENST00000494046 TRIM41Q8WV44 630 aa33.44■■■□□ 2.94
ABCA2-222ENST00000494046 TDRD9Q8NDG6 1382 aaKnown RBP33.42■■■□□ 2.94
ABCA2-222ENST00000494046 FBLN2P98095 1184 aa33.29■■■□□ 2.92
ABCA2-222ENST00000494046 CHD1O14646 1710 aa33.24■■■□□ 2.91
ABCA2-222ENST00000494046 SNAPC4Q5SXM2 1469 aa33.19■■■□□ 2.9
ABCA2-222ENST00000494046 WDR97A6NE52 1622 aa33.18■■■□□ 2.9
ABCA2-222ENST00000494046 RIMBP3CA6NJZ7 1639 aa33.13■■■□□ 2.89
ABCA2-222ENST00000494046 RIMBP3BA6NNM3 1639 aa33.13■■■□□ 2.89
ABCA2-222ENST00000494046 RIMBP3Q9UFD9 1639 aa33.13■■■□□ 2.89
ABCA2-222ENST00000494046 GRIN2BQ13224 1484 aa33.12■■■□□ 2.89
ABCA2-222ENST00000494046 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
ABCA2-222ENST00000494046 ABCA10Q8WWZ4 1543 aa33.08■■■□□ 2.89
ABCA2-222ENST00000494046 GAPVD1Q14C86 1478 aa33.08■■■□□ 2.89
ABCA2-222ENST00000494046 ARHGEF11O15085 1522 aa33.08■■■□□ 2.89
ABCA2-222ENST00000494046 CHMP7Q8WUX9 453 aaPredicted RBP33.06■■■□□ 2.88
ABCA2-222ENST00000494046 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
ABCA2-222ENST00000494046 MAGI1Q96QZ7 1491 aaPredicted RBP33.06■■■□□ 2.88
ABCA2-222ENST00000494046 TOP2BQ02880 1626 aa33.04■■■□□ 2.88
ABCA2-222ENST00000494046 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
ABCA2-222ENST00000494046 PBRM1Q86U86 1689 aa33■■■□□ 2.87
ABCA2-222ENST00000494046 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
ABCA2-222ENST00000494046 SYNJ2O15056 1496 aa32.96■■■□□ 2.87
ABCA2-222ENST00000494046 CYB5RLQ6IPT4 315 aa32.89■■■□□ 2.86
ABCA2-222ENST00000494046 CLASP1Q7Z460 1538 aa32.85■■■□□ 2.85
ABCA2-222ENST00000494046 ARAP1Q96P48 1450 aa32.79■■■□□ 2.84
ABCA2-222ENST00000494046 ADAMTS12P58397 1594 aa32.72■■■□□ 2.83
ABCA2-222ENST00000494046 GRIN2AQ12879 1464 aa32.7■■■□□ 2.83
ABCA2-222ENST00000494046 FHAD1B1AJZ9 1412 aa32.66■■■□□ 2.82
ABCA2-222ENST00000494046 ERICH3Q5RHP9 1530 aa32.66■■■□□ 2.82
ABCA2-222ENST00000494046 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
ABCA2-222ENST00000494046 NUP160Q12769 1436 aa32.56■■■□□ 2.8
ABCA2-222ENST00000494046 ERCC6L2Q5T890 1561 aa32.45■■■□□ 2.79
ABCA2-222ENST00000494046 KIF27Q86VH2 1401 aa32.44■■■□□ 2.78
ABCA2-222ENST00000494046 IGF1RP08069 1367 aa32.41■■■□□ 2.78
ABCA2-222ENST00000494046 TRHP20396 242 aaPredicted RBP32.4■■■□□ 2.78
ABCA2-222ENST00000494046 SHROOM2Q13796 1616 aa32.34■■■□□ 2.77
ABCA2-222ENST00000494046 JPH4Q96JJ6 628 aa32.29■■■□□ 2.76
ABCA2-222ENST00000494046 PRG4Q92954 1404 aaPredicted RBP32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms