RNA–Protein interactions for RNA: ENST00000494037.1

TSPAN7-208, Transcript of tetraspanin 7, humanhuman

TSL 4

Gene TSPAN7, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN7-208ENST00000494037 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.88
TSPAN7-208ENST00000494037 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
TSPAN7-208ENST00000494037 ABCC9O60706 1549 aa18.16■□□□□ 0.5
TSPAN7-208ENST00000494037 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
TSPAN7-208ENST00000494037 NACADO15069 1562 aa17.3■□□□□ 0.36
TSPAN7-208ENST00000494037 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
TSPAN7-208ENST00000494037 ZCCHC6Q5VYS8 1495 aaKnown RBP17.13■□□□□ 0.33
TSPAN7-208ENST00000494037 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
TSPAN7-208ENST00000494037 UNC13AQ9UPW8 1703 aa17.03■□□□□ 0.32
TSPAN7-208ENST00000494037 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
TSPAN7-208ENST00000494037 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
TSPAN7-208ENST00000494037 BICRAQ9NZM4 1560 aa16.89■□□□□ 0.3
TSPAN7-208ENST00000494037 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
TSPAN7-208ENST00000494037 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
TSPAN7-208ENST00000494037 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
TSPAN7-208ENST00000494037 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
TSPAN7-208ENST00000494037 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
TSPAN7-208ENST00000494037 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.2
TSPAN7-208ENST00000494037 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
TSPAN7-208ENST00000494037 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
TSPAN7-208ENST00000494037 NCAPD3P42695 1498 aa15.96■□□□□ 0.14
TSPAN7-208ENST00000494037 BAZ1AQ9NRL2 1556 aaPredicted RBP15.96■□□□□ 0.14
TSPAN7-208ENST00000494037 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
TSPAN7-208ENST00000494037 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
TSPAN7-208ENST00000494037 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
TSPAN7-208ENST00000494037 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
TSPAN7-208ENST00000494037 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
TSPAN7-208ENST00000494037 WIZO95785 1651 aa15.7■□□□□ 0.1
TSPAN7-208ENST00000494037 NESP48681 1621 aa15.68■□□□□ 0.1
TSPAN7-208ENST00000494037 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
TSPAN7-208ENST00000494037 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
TSPAN7-208ENST00000494037 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.09
TSPAN7-208ENST00000494037 CUX2O14529 1486 aa15.55■□□□□ 0.08
TSPAN7-208ENST00000494037 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
TSPAN7-208ENST00000494037 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
TSPAN7-208ENST00000494037 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
TSPAN7-208ENST00000494037 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
TSPAN7-208ENST00000494037 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
TSPAN7-208ENST00000494037 CFTRP13569 1480 aa15.37■□□□□ 0.05
TSPAN7-208ENST00000494037 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
TSPAN7-208ENST00000494037 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.04
TSPAN7-208ENST00000494037 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
TSPAN7-208ENST00000494037 WDR62O43379 1518 aa15.33■□□□□ 0.04
TSPAN7-208ENST00000494037 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
TSPAN7-208ENST00000494037 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
TSPAN7-208ENST00000494037 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
TSPAN7-208ENST00000494037 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
TSPAN7-208ENST00000494037 TOPBP1Q92547 1522 aa15.07■□□□□ 0
TSPAN7-208ENST00000494037 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
TSPAN7-208ENST00000494037 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
TSPAN7-208ENST00000494037 ABCC8Q09428 1581 aa15□□□□□ -0.01
TSPAN7-208ENST00000494037 IFT140Q96RY7 1462 aa15□□□□□ -0.01
TSPAN7-208ENST00000494037 ZNF608Q9ULD9 1512 aaPredicted RBP14.99□□□□□ -0.01
TSPAN7-208ENST00000494037 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
TSPAN7-208ENST00000494037 EIF4G3O43432 1585 aaKnown RBP14.94□□□□□ -0.02
TSPAN7-208ENST00000494037 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
TSPAN7-208ENST00000494037 CUX1P39880 1505 aa14.91□□□□□ -0.02
TSPAN7-208ENST00000494037 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
TSPAN7-208ENST00000494037 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
TSPAN7-208ENST00000494037 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
TSPAN7-208ENST00000494037 SOGA1O94964 1423 aa14.83□□□□□ -0.04
TSPAN7-208ENST00000494037 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
TSPAN7-208ENST00000494037 WDR97A6NE52 1622 aa14.79□□□□□ -0.04
TSPAN7-208ENST00000494037 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
TSPAN7-208ENST00000494037 CHD1O14646 1710 aa14.78□□□□□ -0.04
TSPAN7-208ENST00000494037 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
TSPAN7-208ENST00000494037 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
TSPAN7-208ENST00000494037 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
TSPAN7-208ENST00000494037 TOP2BQ02880 1626 aa14.72□□□□□ -0.05
TSPAN7-208ENST00000494037 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
TSPAN7-208ENST00000494037 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.06
TSPAN7-208ENST00000494037 PBRM1Q86U86 1689 aa14.7□□□□□ -0.06
TSPAN7-208ENST00000494037 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
TSPAN7-208ENST00000494037 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
TSPAN7-208ENST00000494037 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
TSPAN7-208ENST00000494037 RIMBP3CA6NJZ7 1639 aa14.69□□□□□ -0.06
TSPAN7-208ENST00000494037 RIMBP3BA6NNM3 1639 aa14.69□□□□□ -0.06
TSPAN7-208ENST00000494037 RIMBP3Q9UFD9 1639 aa14.69□□□□□ -0.06
TSPAN7-208ENST00000494037 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
TSPAN7-208ENST00000494037 GAPVD1Q14C86 1478 aa14.67□□□□□ -0.06
TSPAN7-208ENST00000494037 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
TSPAN7-208ENST00000494037 FBLN2P98095 1184 aa14.66□□□□□ -0.06
TSPAN7-208ENST00000494037 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
TSPAN7-208ENST00000494037 CLASP1Q7Z460 1538 aa14.61□□□□□ -0.07
TSPAN7-208ENST00000494037 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
TSPAN7-208ENST00000494037 ADAMTS12P58397 1594 aa14.58□□□□□ -0.08
TSPAN7-208ENST00000494037 ARAP1Q96P48 1450 aa14.55□□□□□ -0.08
TSPAN7-208ENST00000494037 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.08
TSPAN7-208ENST00000494037 GRIN2AQ12879 1464 aa14.52□□□□□ -0.08
TSPAN7-208ENST00000494037 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
TSPAN7-208ENST00000494037 CEP170Q5SW79 1584 aa14.48□□□□□ -0.09
TSPAN7-208ENST00000494037 CYB5RLQ6IPT4 315 aa14.47□□□□□ -0.09
TSPAN7-208ENST00000494037 NUP160Q12769 1436 aa14.47□□□□□ -0.09
TSPAN7-208ENST00000494037 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
TSPAN7-208ENST00000494037 SHROOM2Q13796 1616 aa14.4□□□□□ -0.1
TSPAN7-208ENST00000494037 KIF27Q86VH2 1401 aa14.4□□□□□ -0.1
TSPAN7-208ENST00000494037 RUSC2Q8N2Y8 1516 aa14.37□□□□□ -0.11
TSPAN7-208ENST00000494037 CUL7Q14999 1698 aa14.36□□□□□ -0.11
TSPAN7-208ENST00000494037 IGF1RP08069 1367 aa14.36□□□□□ -0.11
TSPAN7-208ENST00000494037 PRG4Q92954 1404 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms