RNA–Protein interactions for RNA: ENST00000493977.1

OBSCN-208, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 3

Gene OBSCN, Length 732 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-208ENST00000493977 NISCHQ9Y2I1 1504 aa39.6■■■■□ 3.93
OBSCN-208ENST00000493977 ABCC9O60706 1549 aa35.89■■■■□ 3.34
OBSCN-208ENST00000493977 CCDC180Q9P1Z9 1646 aa35.74■■■■□ 3.31
OBSCN-208ENST00000493977 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
OBSCN-208ENST00000493977 DNAJC5BQ9UF47 199 aa33.89■■■■□ 3.02
OBSCN-208ENST00000493977 NACADO15069 1562 aa33.75■■■□□ 2.99
OBSCN-208ENST00000493977 UNC13AQ9UPW8 1703 aa33.47■■■□□ 2.95
OBSCN-208ENST00000493977 DCAF8L2P0C7V8 631 aa33.38■■■□□ 2.93
OBSCN-208ENST00000493977 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
OBSCN-208ENST00000493977 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
OBSCN-208ENST00000493977 BICRAQ9NZM4 1560 aa33.16■■■□□ 2.9
OBSCN-208ENST00000493977 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
OBSCN-208ENST00000493977 DCAF1Q9Y4B6 1507 aa32.69■■■□□ 2.82
OBSCN-208ENST00000493977 SHROOM4Q9ULL8 1493 aa32.59■■■□□ 2.81
OBSCN-208ENST00000493977 SCRIBQ14160 1630 aa32.54■■■□□ 2.8
OBSCN-208ENST00000493977 CC2D2AQ9P2K1 1620 aa32.46■■■□□ 2.79
OBSCN-208ENST00000493977 CECR2Q9BXF3 1484 aa32.34■■■□□ 2.77
OBSCN-208ENST00000493977 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
OBSCN-208ENST00000493977 DNAJC5Q9H3Z4 198 aa31.75■■■□□ 2.67
OBSCN-208ENST00000493977 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
OBSCN-208ENST00000493977 ATAD2BQ9ULI0 1458 aa31.02■■■□□ 2.56
OBSCN-208ENST00000493977 CUX2O14529 1486 aa31.01■■■□□ 2.56
OBSCN-208ENST00000493977 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
OBSCN-208ENST00000493977 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
OBSCN-208ENST00000493977 HMGXB3Q12766 1538 aa30.94■■■□□ 2.54
OBSCN-208ENST00000493977 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
OBSCN-208ENST00000493977 NESP48681 1621 aa30.8■■■□□ 2.52
OBSCN-208ENST00000493977 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
OBSCN-208ENST00000493977 BAZ1BQ9UIG0 1483 aaKnown RBP30.71■■■□□ 2.51
OBSCN-208ENST00000493977 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
OBSCN-208ENST00000493977 THOC2Q8NI27 1593 aaKnown RBP30.61■■■□□ 2.49
OBSCN-208ENST00000493977 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
OBSCN-208ENST00000493977 LAMC3Q9Y6N6 1575 aa30.53■■■□□ 2.48
OBSCN-208ENST00000493977 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
OBSCN-208ENST00000493977 PDS5BQ9NTI5 1447 aa30.26■■■□□ 2.43
OBSCN-208ENST00000493977 WIZO95785 1651 aa30.21■■■□□ 2.43
OBSCN-208ENST00000493977 CADPSQ9ULU8 1353 aa30.14■■■□□ 2.41
OBSCN-208ENST00000493977 MRC2Q9UBG0 1479 aa30.09■■■□□ 2.41
OBSCN-208ENST00000493977 WDR62O43379 1518 aa30.06■■■□□ 2.4
OBSCN-208ENST00000493977 TRIM41Q8WV44 630 aa30.05■■■□□ 2.4
OBSCN-208ENST00000493977 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
OBSCN-208ENST00000493977 FANCD2Q9BXW9 1451 aa29.86■■■□□ 2.37
OBSCN-208ENST00000493977 CFTRP13569 1480 aa29.79■■■□□ 2.36
OBSCN-208ENST00000493977 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
OBSCN-208ENST00000493977 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
OBSCN-208ENST00000493977 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
OBSCN-208ENST00000493977 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
OBSCN-208ENST00000493977 OSCARQ8IYS5 282 aa29.43■■■□□ 2.3
OBSCN-208ENST00000493977 CCDC88BA6NC98 1476 aa29.39■■■□□ 2.3
OBSCN-208ENST00000493977 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
OBSCN-208ENST00000493977 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
OBSCN-208ENST00000493977 RIMBP3CA6NJZ7 1639 aa29.29■■■□□ 2.28
OBSCN-208ENST00000493977 RIMBP3BA6NNM3 1639 aa29.29■■■□□ 2.28
OBSCN-208ENST00000493977 RIMBP3Q9UFD9 1639 aa29.29■■■□□ 2.28
OBSCN-208ENST00000493977 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
OBSCN-208ENST00000493977 EIF4G3O43432 1585 aaKnown RBP29.22■■■□□ 2.27
OBSCN-208ENST00000493977 DNMBPQ6XZF7 1577 aa29.18■■■□□ 2.26
OBSCN-208ENST00000493977 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
OBSCN-208ENST00000493977 ARHGEF11O15085 1522 aa29.12■■■□□ 2.25
OBSCN-208ENST00000493977 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
OBSCN-208ENST00000493977 CHD1O14646 1710 aa29.1■■■□□ 2.25
OBSCN-208ENST00000493977 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.232e-6■■■□□ 18.4
OBSCN-208ENST00000493977 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
OBSCN-208ENST00000493977 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
OBSCN-208ENST00000493977 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
OBSCN-208ENST00000493977 CYB5RLQ6IPT4 315 aa28.79■■■□□ 2.2
OBSCN-208ENST00000493977 FBLN2P98095 1184 aa28.76■■■□□ 2.19
OBSCN-208ENST00000493977 FGD5Q6ZNL6 1462 aa28.76■■■□□ 2.19
OBSCN-208ENST00000493977 SOGA1O94964 1423 aa28.76■■■□□ 2.19
OBSCN-208ENST00000493977 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
OBSCN-208ENST00000493977 WDR97A6NE52 1622 aa28.74■■■□□ 2.19
OBSCN-208ENST00000493977 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
OBSCN-208ENST00000493977 CUX1P39880 1505 aa28.72■■■□□ 2.19
OBSCN-208ENST00000493977 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
OBSCN-208ENST00000493977 TRHP20396 242 aaPredicted RBP28.64■■■□□ 2.18
OBSCN-208ENST00000493977 MAGI1Q96QZ7 1491 aaPredicted RBP28.6■■■□□ 2.17
OBSCN-208ENST00000493977 SYNJ1O43426 1573 aa28.6■■■□□ 2.17
OBSCN-208ENST00000493977 PBRM1Q86U86 1689 aa28.6■■■□□ 2.17
OBSCN-208ENST00000493977 GRIN2BQ13224 1484 aa28.57■■■□□ 2.16
OBSCN-208ENST00000493977 SYNJ2O15056 1496 aa28.52■■■□□ 2.16
OBSCN-208ENST00000493977 CHMP7Q8WUX9 453 aaPredicted RBP28.49■■■□□ 2.15
OBSCN-208ENST00000493977 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
OBSCN-208ENST00000493977 AEBP2Q6ZN18 517 aaPredicted RBP28.44■■■□□ 2.14
OBSCN-208ENST00000493977 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
OBSCN-208ENST00000493977 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
OBSCN-208ENST00000493977 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
OBSCN-208ENST00000493977 ERCC6L2Q5T890 1561 aa28.25■■■□□ 2.11
OBSCN-208ENST00000493977 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
OBSCN-208ENST00000493977 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
OBSCN-208ENST00000493977 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
OBSCN-208ENST00000493977 TOP2BQ02880 1626 aa28.19■■■□□ 2.1
OBSCN-208ENST00000493977 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
OBSCN-208ENST00000493977 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
OBSCN-208ENST00000493977 NUP160Q12769 1436 aa28.14■■■□□ 2.1
OBSCN-208ENST00000493977 SHROOM2Q13796 1616 aa28.13■■■□□ 2.09
OBSCN-208ENST00000493977 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
OBSCN-208ENST00000493977 ERICH3Q5RHP9 1530 aa28.03■■■□□ 2.08
OBSCN-208ENST00000493977 KIF13AQ9H1H9 1805 aa27.94■■■□□ 2.06
OBSCN-208ENST00000493977 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
OBSCN-208ENST00000493977 PRG4Q92954 1404 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms