RNA–Protein interactions for RNA: ENST00000493967.1

PATJ-211, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 2

Gene PATJ, Length 574 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-211ENST00000493967 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
PATJ-211ENST00000493967 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
PATJ-211ENST00000493967 ABCC9O60706 1549 aa16.11■□□□□ 0.17
PATJ-211ENST00000493967 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
PATJ-211ENST00000493967 DCAF8L2P0C7V8 631 aa15.41■□□□□ 0.06
PATJ-211ENST00000493967 NACADO15069 1562 aa15.39■□□□□ 0.05
PATJ-211ENST00000493967 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
PATJ-211ENST00000493967 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
PATJ-211ENST00000493967 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
PATJ-211ENST00000493967 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
PATJ-211ENST00000493967 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
PATJ-211ENST00000493967 BICRAQ9NZM4 1560 aa14.99□□□□□ -0.01
PATJ-211ENST00000493967 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
PATJ-211ENST00000493967 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
PATJ-211ENST00000493967 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
PATJ-211ENST00000493967 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
PATJ-211ENST00000493967 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
PATJ-211ENST00000493967 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
PATJ-211ENST00000493967 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.09
PATJ-211ENST00000493967 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
PATJ-211ENST00000493967 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
PATJ-211ENST00000493967 ATAD2BQ9ULI0 1458 aa14.21□□□□□ -0.13
PATJ-211ENST00000493967 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
PATJ-211ENST00000493967 CHIC1Q5VXU3 224 aa14.19□□□□□ -0.14
PATJ-211ENST00000493967 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
PATJ-211ENST00000493967 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
PATJ-211ENST00000493967 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
PATJ-211ENST00000493967 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
PATJ-211ENST00000493967 BAZ1BQ9UIG0 1483 aaKnown RBP14.09□□□□□ -0.15
PATJ-211ENST00000493967 WIZO95785 1651 aa14.04□□□□□ -0.16
PATJ-211ENST00000493967 RSF1Q96T23 1441 aaPredicted RBP13.97□□□□□ -0.17
PATJ-211ENST00000493967 NESP48681 1621 aa13.93□□□□□ -0.18
PATJ-211ENST00000493967 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
PATJ-211ENST00000493967 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
PATJ-211ENST00000493967 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
PATJ-211ENST00000493967 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
PATJ-211ENST00000493967 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
PATJ-211ENST00000493967 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
PATJ-211ENST00000493967 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
PATJ-211ENST00000493967 CUX2O14529 1486 aa13.73□□□□□ -0.21
PATJ-211ENST00000493967 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
PATJ-211ENST00000493967 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
PATJ-211ENST00000493967 CFTRP13569 1480 aa13.69□□□□□ -0.22
PATJ-211ENST00000493967 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
PATJ-211ENST00000493967 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
PATJ-211ENST00000493967 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
PATJ-211ENST00000493967 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
PATJ-211ENST00000493967 SUPT5HO00267 1087 aaKnown RBP13.6□□□□□ -0.23
PATJ-211ENST00000493967 WDR62O43379 1518 aa13.59□□□□□ -0.23
PATJ-211ENST00000493967 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
PATJ-211ENST00000493967 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
PATJ-211ENST00000493967 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
PATJ-211ENST00000493967 ABCC8Q09428 1581 aa13.38□□□□□ -0.27
PATJ-211ENST00000493967 IFT140Q96RY7 1462 aa13.34□□□□□ -0.27
PATJ-211ENST00000493967 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
PATJ-211ENST00000493967 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
PATJ-211ENST00000493967 CUX1P39880 1505 aa13.3□□□□□ -0.28
PATJ-211ENST00000493967 TARBP1Q13395 1621 aaKnown RBP13.29□□□□□ -0.28
PATJ-211ENST00000493967 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
PATJ-211ENST00000493967 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
PATJ-211ENST00000493967 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
PATJ-211ENST00000493967 SOGA1O94964 1423 aa13.24□□□□□ -0.29
PATJ-211ENST00000493967 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
PATJ-211ENST00000493967 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
PATJ-211ENST00000493967 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
PATJ-211ENST00000493967 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
PATJ-211ENST00000493967 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
PATJ-211ENST00000493967 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
PATJ-211ENST00000493967 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
PATJ-211ENST00000493967 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
PATJ-211ENST00000493967 CHD1O14646 1710 aa13.13□□□□□ -0.31
PATJ-211ENST00000493967 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
PATJ-211ENST00000493967 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
PATJ-211ENST00000493967 PBRM1Q86U86 1689 aa13.1□□□□□ -0.31
PATJ-211ENST00000493967 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
PATJ-211ENST00000493967 FBLN2P98095 1184 aa13.09□□□□□ -0.31
PATJ-211ENST00000493967 ABCA5Q8WWZ7 1642 aa13.09□□□□□ -0.31
PATJ-211ENST00000493967 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
PATJ-211ENST00000493967 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
PATJ-211ENST00000493967 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
PATJ-211ENST00000493967 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
PATJ-211ENST00000493967 SYNJ2O15056 1496 aa13.01□□□□□ -0.33
PATJ-211ENST00000493967 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
PATJ-211ENST00000493967 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
PATJ-211ENST00000493967 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
PATJ-211ENST00000493967 ADAMTS12P58397 1594 aa12.97□□□□□ -0.33
PATJ-211ENST00000493967 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
PATJ-211ENST00000493967 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
PATJ-211ENST00000493967 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
PATJ-211ENST00000493967 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
PATJ-211ENST00000493967 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
PATJ-211ENST00000493967 KIF27Q86VH2 1401 aa12.89□□□□□ -0.35
PATJ-211ENST00000493967 CEP170Q5SW79 1584 aa12.89□□□□□ -0.35
PATJ-211ENST00000493967 NUP160Q12769 1436 aa12.86□□□□□ -0.35
PATJ-211ENST00000493967 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
PATJ-211ENST00000493967 IGF1RP08069 1367 aa12.85□□□□□ -0.35
PATJ-211ENST00000493967 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
PATJ-211ENST00000493967 CUL7Q14999 1698 aa12.84□□□□□ -0.35
PATJ-211ENST00000493967 RUSC2Q8N2Y8 1516 aa12.81□□□□□ -0.36
PATJ-211ENST00000493967 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 254.9 ms