RNA–Protein interactions for RNA: ENST00000493961.5

PCBD1-203, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

TSL 2

Gene PCBD1, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-203ENST00000493961 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
PCBD1-203ENST00000493961 ABCC9O60706 1549 aa27.54■■■□□ 2
PCBD1-203ENST00000493961 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
PCBD1-203ENST00000493961 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
PCBD1-203ENST00000493961 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
PCBD1-203ENST00000493961 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
PCBD1-203ENST00000493961 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
PCBD1-203ENST00000493961 NACADO15069 1562 aa25.41■■□□□ 1.66
PCBD1-203ENST00000493961 UNC13AQ9UPW8 1703 aa25.07■■□□□ 1.6
PCBD1-203ENST00000493961 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
PCBD1-203ENST00000493961 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
PCBD1-203ENST00000493961 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
PCBD1-203ENST00000493961 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
PCBD1-203ENST00000493961 SHROOM4Q9ULL8 1493 aa24.78■■□□□ 1.56
PCBD1-203ENST00000493961 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
PCBD1-203ENST00000493961 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
PCBD1-203ENST00000493961 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
PCBD1-203ENST00000493961 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.5
PCBD1-203ENST00000493961 CUX2O14529 1486 aa24.3■■□□□ 1.48
PCBD1-203ENST00000493961 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
PCBD1-203ENST00000493961 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
PCBD1-203ENST00000493961 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
PCBD1-203ENST00000493961 NCAPD3P42695 1498 aa23.47■■□□□ 1.35
PCBD1-203ENST00000493961 THOC2Q8NI27 1593 aaKnown RBP23.34■■□□□ 1.33
PCBD1-203ENST00000493961 NESP48681 1621 aa23.31■■□□□ 1.32
PCBD1-203ENST00000493961 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
PCBD1-203ENST00000493961 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
PCBD1-203ENST00000493961 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
PCBD1-203ENST00000493961 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
PCBD1-203ENST00000493961 PDS5BQ9NTI5 1447 aa23.06■■□□□ 1.28
PCBD1-203ENST00000493961 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
PCBD1-203ENST00000493961 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
PCBD1-203ENST00000493961 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
PCBD1-203ENST00000493961 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
PCBD1-203ENST00000493961 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
PCBD1-203ENST00000493961 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
PCBD1-203ENST00000493961 WDR62O43379 1518 aa22.82■■□□□ 1.24
PCBD1-203ENST00000493961 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
PCBD1-203ENST00000493961 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
PCBD1-203ENST00000493961 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
PCBD1-203ENST00000493961 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
PCBD1-203ENST00000493961 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
PCBD1-203ENST00000493961 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
PCBD1-203ENST00000493961 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
PCBD1-203ENST00000493961 TRHP20396 242 aaPredicted RBP22.61■■□□□ 1.21
PCBD1-203ENST00000493961 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
PCBD1-203ENST00000493961 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
PCBD1-203ENST00000493961 WIZO95785 1651 aa22.54■■□□□ 1.2
PCBD1-203ENST00000493961 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
PCBD1-203ENST00000493961 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
PCBD1-203ENST00000493961 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
PCBD1-203ENST00000493961 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
PCBD1-203ENST00000493961 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
PCBD1-203ENST00000493961 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
PCBD1-203ENST00000493961 CFTRP13569 1480 aa22.2■■□□□ 1.14
PCBD1-203ENST00000493961 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
PCBD1-203ENST00000493961 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
PCBD1-203ENST00000493961 PRDM2Q13029 1718 aa22■■□□□ 1.11
PCBD1-203ENST00000493961 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
PCBD1-203ENST00000493961 CHD1O14646 1710 aa21.97■■□□□ 1.11
PCBD1-203ENST00000493961 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
PCBD1-203ENST00000493961 FBLN2P98095 1184 aa21.93■■□□□ 1.1
PCBD1-203ENST00000493961 ILDR1Q86SU0 546 aaPredicted RBP21.9■■□□□ 1.1
PCBD1-203ENST00000493961 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
PCBD1-203ENST00000493961 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
PCBD1-203ENST00000493961 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.08
PCBD1-203ENST00000493961 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
PCBD1-203ENST00000493961 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
PCBD1-203ENST00000493961 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
PCBD1-203ENST00000493961 DNMBPQ6XZF7 1577 aa21.69■■□□□ 1.06
PCBD1-203ENST00000493961 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
PCBD1-203ENST00000493961 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
PCBD1-203ENST00000493961 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
PCBD1-203ENST00000493961 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.05
PCBD1-203ENST00000493961 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
PCBD1-203ENST00000493961 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
PCBD1-203ENST00000493961 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
PCBD1-203ENST00000493961 TDRD9Q8NDG6 1382 aaKnown RBP21.52■■□□□ 1.04
PCBD1-203ENST00000493961 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
PCBD1-203ENST00000493961 SOGA1O94964 1423 aa21.46■■□□□ 1.03
PCBD1-203ENST00000493961 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
PCBD1-203ENST00000493961 KDM4FA0A1W2PPD8 638 aa21.43■■□□□ 1.02
PCBD1-203ENST00000493961 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
PCBD1-203ENST00000493961 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
PCBD1-203ENST00000493961 CUX1P39880 1505 aa21.32■■□□□ 1
PCBD1-203ENST00000493961 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
PCBD1-203ENST00000493961 ERCC6L2Q5T890 1561 aa21.25■□□□□ 0.99
PCBD1-203ENST00000493961 FAM69CQ0P6D2 419 aa21.24■□□□□ 0.99
PCBD1-203ENST00000493961 BIVM-ERCC5R4GMW8 1640 aa21.24■□□□□ 0.99
PCBD1-203ENST00000493961 ABCC10Q5T3U5 1492 aa21.21■□□□□ 0.99
PCBD1-203ENST00000493961 KDM6BO15054 1643 aa21.21■□□□□ 0.99
PCBD1-203ENST00000493961 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
PCBD1-203ENST00000493961 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
PCBD1-203ENST00000493961 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
PCBD1-203ENST00000493961 NPM1P06748 294 aaKnown RBP eCLIP21.14■□□□□ 0.97
PCBD1-203ENST00000493961 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
PCBD1-203ENST00000493961 FBXO41Q8TF61 875 aa21.11■□□□□ 0.97
PCBD1-203ENST00000493961 NUP160Q12769 1436 aa21.11■□□□□ 0.97
PCBD1-203ENST00000493961 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
PCBD1-203ENST00000493961 MAPKBP1O60336 1514 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms