RNA–Protein interactions for RNA: ENST00000493896.2

ECHDC2-218, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-218ENST00000493896 NISCHQ9Y2I1 1504 aa32.85■■■□□ 2.85
ECHDC2-218ENST00000493896 CCDC180Q9P1Z9 1646 aa29.18■■■□□ 2.26
ECHDC2-218ENST00000493896 ABCC9O60706 1549 aa28.64■■■□□ 2.18
ECHDC2-218ENST00000493896 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
ECHDC2-218ENST00000493896 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
ECHDC2-218ENST00000493896 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
ECHDC2-218ENST00000493896 NACADO15069 1562 aa27.39■■□□□ 1.97
ECHDC2-218ENST00000493896 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
ECHDC2-218ENST00000493896 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
ECHDC2-218ENST00000493896 DNAJC5BQ9UF47 199 aa27.14■■□□□ 1.94
ECHDC2-218ENST00000493896 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
ECHDC2-218ENST00000493896 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
ECHDC2-218ENST00000493896 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
ECHDC2-218ENST00000493896 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
ECHDC2-218ENST00000493896 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
ECHDC2-218ENST00000493896 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
ECHDC2-218ENST00000493896 CECR2Q9BXF3 1484 aa25.83■■□□□ 1.73
ECHDC2-218ENST00000493896 CC2D2AQ9P2K1 1620 aa25.81■■□□□ 1.72
ECHDC2-218ENST00000493896 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
ECHDC2-218ENST00000493896 BAZ1AQ9NRL2 1556 aaPredicted RBP25.47■■□□□ 1.67
ECHDC2-218ENST00000493896 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
ECHDC2-218ENST00000493896 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
ECHDC2-218ENST00000493896 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
ECHDC2-218ENST00000493896 NCAPD3P42695 1498 aa25.25■■□□□ 1.63
ECHDC2-218ENST00000493896 DNAJC5Q9H3Z4 198 aa25.22■■□□□ 1.63
ECHDC2-218ENST00000493896 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
ECHDC2-218ENST00000493896 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
ECHDC2-218ENST00000493896 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
ECHDC2-218ENST00000493896 WIZO95785 1651 aa25.07■■□□□ 1.6
ECHDC2-218ENST00000493896 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
ECHDC2-218ENST00000493896 ERCC6Q03468 1493 aa24.81■■□□□ 1.56
ECHDC2-218ENST00000493896 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
ECHDC2-218ENST00000493896 CUX2O14529 1486 aa24.78■■□□□ 1.56
ECHDC2-218ENST00000493896 NESP48681 1621 aa24.61■■□□□ 1.53
ECHDC2-218ENST00000493896 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
ECHDC2-218ENST00000493896 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
ECHDC2-218ENST00000493896 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
ECHDC2-218ENST00000493896 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
ECHDC2-218ENST00000493896 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
ECHDC2-218ENST00000493896 CFTRP13569 1480 aa24.41■■□□□ 1.5
ECHDC2-218ENST00000493896 KIF21AQ7Z4S6 1674 aa24.35■■□□□ 1.49
ECHDC2-218ENST00000493896 PRDM2Q13029 1718 aa24.29■■□□□ 1.48
ECHDC2-218ENST00000493896 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
ECHDC2-218ENST00000493896 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
ECHDC2-218ENST00000493896 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
ECHDC2-218ENST00000493896 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
ECHDC2-218ENST00000493896 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
ECHDC2-218ENST00000493896 WDR62O43379 1518 aa24.07■■□□□ 1.44
ECHDC2-218ENST00000493896 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
ECHDC2-218ENST00000493896 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
ECHDC2-218ENST00000493896 TOPBP1Q92547 1522 aa23.89■■□□□ 1.41
ECHDC2-218ENST00000493896 DNMBPQ6XZF7 1577 aa23.88■■□□□ 1.41
ECHDC2-218ENST00000493896 CUX1P39880 1505 aa23.74■■□□□ 1.39
ECHDC2-218ENST00000493896 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
ECHDC2-218ENST00000493896 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
ECHDC2-218ENST00000493896 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
ECHDC2-218ENST00000493896 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
ECHDC2-218ENST00000493896 WRNQ14191 1432 aaPredicted RBP eCLIP23.64■■□□□ 1.37
ECHDC2-218ENST00000493896 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
ECHDC2-218ENST00000493896 SOGA1O94964 1423 aa23.59■■□□□ 1.37
ECHDC2-218ENST00000493896 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
ECHDC2-218ENST00000493896 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
ECHDC2-218ENST00000493896 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
ECHDC2-218ENST00000493896 RAD54L2Q9Y4B4 1467 aa23.57■■□□□ 1.36
ECHDC2-218ENST00000493896 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
ECHDC2-218ENST00000493896 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
ECHDC2-218ENST00000493896 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
ECHDC2-218ENST00000493896 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.353e-6■■□□□ 13.8
ECHDC2-218ENST00000493896 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
ECHDC2-218ENST00000493896 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
ECHDC2-218ENST00000493896 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
ECHDC2-218ENST00000493896 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
ECHDC2-218ENST00000493896 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
ECHDC2-218ENST00000493896 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
ECHDC2-218ENST00000493896 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
ECHDC2-218ENST00000493896 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
ECHDC2-218ENST00000493896 PBRM1Q86U86 1689 aa23.3■■□□□ 1.32
ECHDC2-218ENST00000493896 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
ECHDC2-218ENST00000493896 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
ECHDC2-218ENST00000493896 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
ECHDC2-218ENST00000493896 CHD1O14646 1710 aa23.2■■□□□ 1.3
ECHDC2-218ENST00000493896 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
ECHDC2-218ENST00000493896 FBLN2P98095 1184 aa23.18■■□□□ 1.3
ECHDC2-218ENST00000493896 ERICH3Q5RHP9 1530 aa23.16■■□□□ 1.3
ECHDC2-218ENST00000493896 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
ECHDC2-218ENST00000493896 SYNJ2O15056 1496 aa23.14■■□□□ 1.29
ECHDC2-218ENST00000493896 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
ECHDC2-218ENST00000493896 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
ECHDC2-218ENST00000493896 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
ECHDC2-218ENST00000493896 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
ECHDC2-218ENST00000493896 IGF1RP08069 1367 aa23.01■■□□□ 1.27
ECHDC2-218ENST00000493896 GRIN2AQ12879 1464 aa23■■□□□ 1.27
ECHDC2-218ENST00000493896 CUL7Q14999 1698 aa23■■□□□ 1.27
ECHDC2-218ENST00000493896 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
ECHDC2-218ENST00000493896 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
ECHDC2-218ENST00000493896 RUSC2Q8N2Y8 1516 aa22.95■■□□□ 1.26
ECHDC2-218ENST00000493896 CLASP1Q7Z460 1538 aa22.92■■□□□ 1.26
ECHDC2-218ENST00000493896 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.26
ECHDC2-218ENST00000493896 NUP160Q12769 1436 aa22.89■■□□□ 1.25
ECHDC2-218ENST00000493896 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms