RNA–Protein interactions for RNA: ENST00000493870.1

CCDC36-205, Transcript of coiled-coil domain containing 36, humanhuman

TSL 3

Gene CCDC36, Length 280 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-205ENST00000493870 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
CCDC36-205ENST00000493870 ABCC9O60706 1549 aa31.3■■■□□ 2.6
CCDC36-205ENST00000493870 CCDC180Q9P1Z9 1646 aa30.97■■■□□ 2.55
CCDC36-205ENST00000493870 DNAJC5BQ9UF47 199 aa29.67■■■□□ 2.34
CCDC36-205ENST00000493870 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
CCDC36-205ENST00000493870 NACADO15069 1562 aa29.3■■■□□ 2.28
CCDC36-205ENST00000493870 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
CCDC36-205ENST00000493870 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.23
CCDC36-205ENST00000493870 DCAF8L2P0C7V8 631 aa28.92■■■□□ 2.22
CCDC36-205ENST00000493870 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
CCDC36-205ENST00000493870 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
CCDC36-205ENST00000493870 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
CCDC36-205ENST00000493870 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
CCDC36-205ENST00000493870 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
CCDC36-205ENST00000493870 DCAF1Q9Y4B6 1507 aa28.24■■■□□ 2.11
CCDC36-205ENST00000493870 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
CCDC36-205ENST00000493870 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
CCDC36-205ENST00000493870 EIF4G1Q04637 1599 aaKnown RBP28.12■■■□□ 2.09
CCDC36-205ENST00000493870 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
CCDC36-205ENST00000493870 CUX2O14529 1486 aa27.11■■□□□ 1.93
CCDC36-205ENST00000493870 NCAPD3P42695 1498 aa27.01■■□□□ 1.91
CCDC36-205ENST00000493870 ERCC6Q03468 1493 aa27■■□□□ 1.91
CCDC36-205ENST00000493870 ATAD2BQ9ULI0 1458 aa26.92■■□□□ 1.9
CCDC36-205ENST00000493870 SMARCA4P51532 1647 aa26.86■■□□□ 1.89
CCDC36-205ENST00000493870 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
CCDC36-205ENST00000493870 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
CCDC36-205ENST00000493870 NESP48681 1621 aa26.81■■□□□ 1.88
CCDC36-205ENST00000493870 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
CCDC36-205ENST00000493870 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
CCDC36-205ENST00000493870 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
CCDC36-205ENST00000493870 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
CCDC36-205ENST00000493870 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
CCDC36-205ENST00000493870 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
CCDC36-205ENST00000493870 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
CCDC36-205ENST00000493870 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
CCDC36-205ENST00000493870 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
CCDC36-205ENST00000493870 WDR62O43379 1518 aa26.16■■□□□ 1.78
CCDC36-205ENST00000493870 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
CCDC36-205ENST00000493870 WIZO95785 1651 aa26.12■■□□□ 1.77
CCDC36-205ENST00000493870 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
CCDC36-205ENST00000493870 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
CCDC36-205ENST00000493870 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
CCDC36-205ENST00000493870 CFTRP13569 1480 aa25.82■■□□□ 1.72
CCDC36-205ENST00000493870 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
CCDC36-205ENST00000493870 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
CCDC36-205ENST00000493870 OSCARQ8IYS5 282 aa25.68■■□□□ 1.7
CCDC36-205ENST00000493870 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
CCDC36-205ENST00000493870 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
CCDC36-205ENST00000493870 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
CCDC36-205ENST00000493870 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
CCDC36-205ENST00000493870 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
CCDC36-205ENST00000493870 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
CCDC36-205ENST00000493870 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
CCDC36-205ENST00000493870 ARHGEF11O15085 1522 aa25.43■■□□□ 1.66
CCDC36-205ENST00000493870 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
CCDC36-205ENST00000493870 TOPBP1Q92547 1522 aa25.4■■□□□ 1.66
CCDC36-205ENST00000493870 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
CCDC36-205ENST00000493870 CHD1O14646 1710 aa25.32■■□□□ 1.64
CCDC36-205ENST00000493870 DNMBPQ6XZF7 1577 aa25.29■■□□□ 1.64
CCDC36-205ENST00000493870 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
CCDC36-205ENST00000493870 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
CCDC36-205ENST00000493870 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.62
CCDC36-205ENST00000493870 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
CCDC36-205ENST00000493870 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
CCDC36-205ENST00000493870 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
CCDC36-205ENST00000493870 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
CCDC36-205ENST00000493870 FBLN2P98095 1184 aa25.01■■□□□ 1.59
CCDC36-205ENST00000493870 TRHP20396 242 aaPredicted RBP24.97■■□□□ 1.59
CCDC36-205ENST00000493870 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
CCDC36-205ENST00000493870 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
CCDC36-205ENST00000493870 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
CCDC36-205ENST00000493870 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
CCDC36-205ENST00000493870 SOGA1O94964 1423 aa24.92■■□□□ 1.58
CCDC36-205ENST00000493870 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
CCDC36-205ENST00000493870 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
CCDC36-205ENST00000493870 CUX1P39880 1505 aa24.86■■□□□ 1.57
CCDC36-205ENST00000493870 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
CCDC36-205ENST00000493870 PBRM1Q86U86 1689 aa24.79■■□□□ 1.56
CCDC36-205ENST00000493870 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
CCDC36-205ENST00000493870 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
CCDC36-205ENST00000493870 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
CCDC36-205ENST00000493870 ABCA5Q8WWZ7 1642 aa24.67■■□□□ 1.54
CCDC36-205ENST00000493870 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
CCDC36-205ENST00000493870 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
CCDC36-205ENST00000493870 ERCC6L2Q5T890 1561 aa24.59■■□□□ 1.53
CCDC36-205ENST00000493870 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
CCDC36-205ENST00000493870 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
CCDC36-205ENST00000493870 GRIN2AQ12879 1464 aa24.5■■□□□ 1.51
CCDC36-205ENST00000493870 CEP170Q5SW79 1584 aa24.49■■□□□ 1.51
CCDC36-205ENST00000493870 NUP160Q12769 1436 aa24.43■■□□□ 1.5
CCDC36-205ENST00000493870 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
CCDC36-205ENST00000493870 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
CCDC36-205ENST00000493870 KIF13AQ9H1H9 1805 aa24.37■■□□□ 1.49
CCDC36-205ENST00000493870 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.49
CCDC36-205ENST00000493870 TOP2BQ02880 1626 aa24.33■■□□□ 1.49
CCDC36-205ENST00000493870 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
CCDC36-205ENST00000493870 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
CCDC36-205ENST00000493870 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
CCDC36-205ENST00000493870 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
CCDC36-205ENST00000493870 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms