RNA–Protein interactions for RNA: ENST00000493850.1

LFNG-206, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 5

Gene LFNG, Length 804 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-206ENST00000493850 NISCHQ9Y2I1 1504 aa45.89■■■■■ 4.94
LFNG-206ENST00000493850 CCDC180Q9P1Z9 1646 aa41.13■■■■■ 4.17
LFNG-206ENST00000493850 ABCC9O60706 1549 aa40.5■■■■■ 4.07
LFNG-206ENST00000493850 RB1CC1Q8TDY2 1594 aa38.82■■■■□ 3.8
LFNG-206ENST00000493850 NACADO15069 1562 aa38.65■■■■□ 3.78
LFNG-206ENST00000493850 DCAF8L2P0C7V8 631 aa38.32■■■■□ 3.72
LFNG-206ENST00000493850 MYO15BQ96JP2 1530 aa38.27■■■■□ 3.72
LFNG-206ENST00000493850 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
LFNG-206ENST00000493850 ZCCHC6Q5VYS8 1495 aaKnown RBP38.17■■■■□ 3.7
LFNG-206ENST00000493850 DCAF1Q9Y4B6 1507 aa37.95■■■■□ 3.67
LFNG-206ENST00000493850 BICRAQ9NZM4 1560 aa37.72■■■■□ 3.63
LFNG-206ENST00000493850 PABPN1Q86U42 306 aaKnown RBP eCLIP37.68■■■■□ 3.62
LFNG-206ENST00000493850 DNAJC5BQ9UF47 199 aa37.5■■■■□ 3.59
LFNG-206ENST00000493850 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
LFNG-206ENST00000493850 SHROOM4Q9ULL8 1493 aa37.2■■■■□ 3.54
LFNG-206ENST00000493850 EIF4G1Q04637 1599 aaKnown RBP36.72■■■■□ 3.47
LFNG-206ENST00000493850 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
LFNG-206ENST00000493850 CECR2Q9BXF3 1484 aa36.42■■■■□ 3.42
LFNG-206ENST00000493850 SMARCA4P51532 1647 aa35.78■■■■□ 3.32
LFNG-206ENST00000493850 NCAPD3P42695 1498 aa35.6■■■■□ 3.29
LFNG-206ENST00000493850 BAZ1AQ9NRL2 1556 aaPredicted RBP35.6■■■■□ 3.29
LFNG-206ENST00000493850 ATAD2BQ9ULI0 1458 aa35.59■■■■□ 3.29
LFNG-206ENST00000493850 SMARCA2P51531 1590 aa35.56■■■■□ 3.28
LFNG-206ENST00000493850 HMGXB3Q12766 1538 aa35.49■■■■□ 3.27
LFNG-206ENST00000493850 PEG3Q9GZU2 1588 aa35.42■■■■□ 3.26
LFNG-206ENST00000493850 MROH2BQ7Z745 1585 aa35.38■■■■□ 3.25
LFNG-206ENST00000493850 BAZ1BQ9UIG0 1483 aaKnown RBP35.29■■■■□ 3.24
LFNG-206ENST00000493850 WIZO95785 1651 aa35.05■■■■□ 3.2
LFNG-206ENST00000493850 NESP48681 1621 aa34.95■■■■□ 3.19
LFNG-206ENST00000493850 ERCC6Q03468 1493 aa34.91■■■■□ 3.18
LFNG-206ENST00000493850 LAMC3Q9Y6N6 1575 aa34.82■■■■□ 3.16
LFNG-206ENST00000493850 RSF1Q96T23 1441 aaPredicted RBP34.75■■■■□ 3.15
LFNG-206ENST00000493850 CUX2O14529 1486 aa34.72■■■■□ 3.15
LFNG-206ENST00000493850 KIF21AQ7Z4S6 1674 aa34.68■■■■□ 3.14
LFNG-206ENST00000493850 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
LFNG-206ENST00000493850 TOP2AP11388 1531 aaKnown RBP34.6■■■■□ 3.13
LFNG-206ENST00000493850 CADPSQ9ULU8 1353 aa34.51■■■■□ 3.12
LFNG-206ENST00000493850 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
LFNG-206ENST00000493850 CFTRP13569 1480 aa34.27■■■■□ 3.08
LFNG-206ENST00000493850 PRDM2Q13029 1718 aa34.27■■■■□ 3.08
LFNG-206ENST00000493850 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
LFNG-206ENST00000493850 CEP164Q9UPV0 1460 aa34.19■■■■□ 3.06
LFNG-206ENST00000493850 WDR62O43379 1518 aa34.19■■■■□ 3.06
LFNG-206ENST00000493850 FANCD2Q9BXW9 1451 aa34.18■■■■□ 3.06
LFNG-206ENST00000493850 CCDC88BA6NC98 1476 aa34.13■■■■□ 3.05
LFNG-206ENST00000493850 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
LFNG-206ENST00000493850 URB2Q14146 1524 aaKnown RBP33.91■■■■□ 3.02
LFNG-206ENST00000493850 TOPBP1Q92547 1522 aa33.62■■■□□ 2.97
LFNG-206ENST00000493850 DNMBPQ6XZF7 1577 aa33.57■■■□□ 2.96
LFNG-206ENST00000493850 ABCC8Q09428 1581 aa33.52■■■□□ 2.96
LFNG-206ENST00000493850 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
LFNG-206ENST00000493850 SUPT5HO00267 1087 aaKnown RBP33.46■■■□□ 2.95
LFNG-206ENST00000493850 ZNF608Q9ULD9 1512 aaPredicted RBP33.39■■■□□ 2.94
LFNG-206ENST00000493850 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
LFNG-206ENST00000493850 EIF4G3O43432 1585 aaKnown RBP33.34■■■□□ 2.93
LFNG-206ENST00000493850 POLA1P09884 1462 aaPredicted RBP33.3■■■□□ 2.92
LFNG-206ENST00000493850 CUX1P39880 1505 aa33.23■■■□□ 2.91
LFNG-206ENST00000493850 FGD5Q6ZNL6 1462 aa33.16■■■□□ 2.9
LFNG-206ENST00000493850 RAD54L2Q9Y4B4 1467 aa33.14■■■□□ 2.9
LFNG-206ENST00000493850 AQRO60306 1485 aaKnown RBP eCLIP33.1■■■□□ 2.89
LFNG-206ENST00000493850 OSCARQ8IYS5 282 aa33.08■■■□□ 2.89
LFNG-206ENST00000493850 CHD1O14646 1710 aa33.08■■■□□ 2.89
LFNG-206ENST00000493850 WDR97A6NE52 1622 aa33.07■■■□□ 2.88
LFNG-206ENST00000493850 SOGA1O94964 1423 aa33.07■■■□□ 2.88
LFNG-206ENST00000493850 TDRD9Q8NDG6 1382 aaKnown RBP32.94■■■□□ 2.86
LFNG-206ENST00000493850 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
LFNG-206ENST00000493850 PBRM1Q86U86 1689 aa32.89■■■□□ 2.86
LFNG-206ENST00000493850 TOP2BQ02880 1626 aa32.85■■■□□ 2.85
LFNG-206ENST00000493850 SYNJ1O43426 1573 aa32.84■■■□□ 2.85
LFNG-206ENST00000493850 SNAPC4Q5SXM2 1469 aa32.83■■■□□ 2.85
LFNG-206ENST00000493850 RIMBP3CA6NJZ7 1639 aa32.82■■■□□ 2.84
LFNG-206ENST00000493850 RIMBP3BA6NNM3 1639 aa32.82■■■□□ 2.84
LFNG-206ENST00000493850 RIMBP3Q9UFD9 1639 aa32.82■■■□□ 2.84
LFNG-206ENST00000493850 ABCA5Q8WWZ7 1642 aa32.81■■■□□ 2.84
LFNG-206ENST00000493850 ABCA10Q8WWZ4 1543 aa32.81■■■□□ 2.84
LFNG-206ENST00000493850 GRIN2BQ13224 1484 aa32.78■■■□□ 2.84
LFNG-206ENST00000493850 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
LFNG-206ENST00000493850 MAGI1Q96QZ7 1491 aaPredicted RBP32.76■■■□□ 2.84
LFNG-206ENST00000493850 TRIM41Q8WV44 630 aa32.75■■■□□ 2.83
LFNG-206ENST00000493850 GAPVD1Q14C86 1478 aa32.74■■■□□ 2.83
LFNG-206ENST00000493850 ARHGEF11O15085 1522 aa32.71■■■□□ 2.83
LFNG-206ENST00000493850 FBLN2P98095 1184 aa32.69■■■□□ 2.82
LFNG-206ENST00000493850 SYNJ2O15056 1496 aa32.62■■■□□ 2.81
LFNG-206ENST00000493850 CLASP1Q7Z460 1538 aa32.59■■■□□ 2.81
LFNG-206ENST00000493850 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
LFNG-206ENST00000493850 ADAMTS12P58397 1594 aa32.52■■■□□ 2.8
LFNG-206ENST00000493850 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
LFNG-206ENST00000493850 ERICH3Q5RHP9 1530 aa32.41■■■□□ 2.78
LFNG-206ENST00000493850 GRIN2AQ12879 1464 aa32.39■■■□□ 2.78
LFNG-206ENST00000493850 FHAD1B1AJZ9 1412 aa32.31■■■□□ 2.76
LFNG-206ENST00000493850 CEP170Q5SW79 1584 aa32.31■■■□□ 2.76
LFNG-206ENST00000493850 CYB5RLQ6IPT4 315 aa32.28■■■□□ 2.76
LFNG-206ENST00000493850 NUP160Q12769 1436 aa32.26■■■□□ 2.75
LFNG-206ENST00000493850 SHROOM2Q13796 1616 aa32.16■■■□□ 2.74
LFNG-206ENST00000493850 ERCC6L2Q5T890 1561 aa32.12■■■□□ 2.73
LFNG-206ENST00000493850 CUL7Q14999 1698 aa32.11■■■□□ 2.73
LFNG-206ENST00000493850 KIF27Q86VH2 1401 aa32.1■■■□□ 2.73
LFNG-206ENST00000493850 RUSC2Q8N2Y8 1516 aa32.05■■■□□ 2.72
LFNG-206ENST00000493850 IGF1RP08069 1367 aa32■■■□□ 2.71
LFNG-206ENST00000493850 PRG4Q92954 1404 aaPredicted RBP31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms