RNA–Protein interactions for RNA: ENST00000493814.1

C1orf43-209, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2

Gene C1orf43, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-209ENST00000493814 NISCHQ9Y2I1 1504 aa22.53■■□□□ 1.2
C1orf43-209ENST00000493814 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
C1orf43-209ENST00000493814 ABCC9O60706 1549 aa19.86■□□□□ 0.77
C1orf43-209ENST00000493814 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
C1orf43-209ENST00000493814 NACADO15069 1562 aa18.99■□□□□ 0.63
C1orf43-209ENST00000493814 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
C1orf43-209ENST00000493814 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
C1orf43-209ENST00000493814 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
C1orf43-209ENST00000493814 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
C1orf43-209ENST00000493814 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
C1orf43-209ENST00000493814 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
C1orf43-209ENST00000493814 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
C1orf43-209ENST00000493814 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
C1orf43-209ENST00000493814 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
C1orf43-209ENST00000493814 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
C1orf43-209ENST00000493814 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
C1orf43-209ENST00000493814 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.48
C1orf43-209ENST00000493814 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
C1orf43-209ENST00000493814 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
C1orf43-209ENST00000493814 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
C1orf43-209ENST00000493814 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
C1orf43-209ENST00000493814 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
C1orf43-209ENST00000493814 ATAD2BQ9ULI0 1458 aa17.46■□□□□ 0.39
C1orf43-209ENST00000493814 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
C1orf43-209ENST00000493814 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
C1orf43-209ENST00000493814 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
C1orf43-209ENST00000493814 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.37
C1orf43-209ENST00000493814 WIZO95785 1651 aa17.23■□□□□ 0.35
C1orf43-209ENST00000493814 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
C1orf43-209ENST00000493814 NESP48681 1621 aa17.14■□□□□ 0.33
C1orf43-209ENST00000493814 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
C1orf43-209ENST00000493814 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
C1orf43-209ENST00000493814 CUX2O14529 1486 aa17.05■□□□□ 0.32
C1orf43-209ENST00000493814 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
C1orf43-209ENST00000493814 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
C1orf43-209ENST00000493814 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
C1orf43-209ENST00000493814 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
C1orf43-209ENST00000493814 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
C1orf43-209ENST00000493814 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
C1orf43-209ENST00000493814 CFTRP13569 1480 aa16.81■□□□□ 0.28
C1orf43-209ENST00000493814 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
C1orf43-209ENST00000493814 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
C1orf43-209ENST00000493814 WDR62O43379 1518 aa16.78■□□□□ 0.28
C1orf43-209ENST00000493814 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
C1orf43-209ENST00000493814 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
C1orf43-209ENST00000493814 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
C1orf43-209ENST00000493814 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
C1orf43-209ENST00000493814 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
C1orf43-209ENST00000493814 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
C1orf43-209ENST00000493814 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
C1orf43-209ENST00000493814 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
C1orf43-209ENST00000493814 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
C1orf43-209ENST00000493814 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
C1orf43-209ENST00000493814 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
C1orf43-209ENST00000493814 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
C1orf43-209ENST00000493814 POLA1P09884 1462 aaPredicted RBP16.34■□□□□ 0.21
C1orf43-209ENST00000493814 CUX1P39880 1505 aa16.3■□□□□ 0.2
C1orf43-209ENST00000493814 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
C1orf43-209ENST00000493814 CHD1O14646 1710 aa16.27■□□□□ 0.19
C1orf43-209ENST00000493814 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
C1orf43-209ENST00000493814 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
C1orf43-209ENST00000493814 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
C1orf43-209ENST00000493814 SOGA1O94964 1423 aa16.24■□□□□ 0.19
C1orf43-209ENST00000493814 AQRO60306 1485 aaKnown RBP eCLIP16.23■□□□□ 0.194e-6■□□□□ 10.9
C1orf43-209ENST00000493814 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
C1orf43-209ENST00000493814 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
C1orf43-209ENST00000493814 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
C1orf43-209ENST00000493814 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
C1orf43-209ENST00000493814 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
C1orf43-209ENST00000493814 RIMBP3CA6NJZ7 1639 aa16.12■□□□□ 0.17
C1orf43-209ENST00000493814 RIMBP3BA6NNM3 1639 aa16.12■□□□□ 0.17
C1orf43-209ENST00000493814 RIMBP3Q9UFD9 1639 aa16.12■□□□□ 0.17
C1orf43-209ENST00000493814 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
C1orf43-209ENST00000493814 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
C1orf43-209ENST00000493814 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
C1orf43-209ENST00000493814 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
C1orf43-209ENST00000493814 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
C1orf43-209ENST00000493814 MAGI1Q96QZ7 1491 aaPredicted RBP16.09■□□□□ 0.17
C1orf43-209ENST00000493814 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
C1orf43-209ENST00000493814 FBLN2P98095 1184 aa16.06■□□□□ 0.16
C1orf43-209ENST00000493814 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
C1orf43-209ENST00000493814 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
C1orf43-209ENST00000493814 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
C1orf43-209ENST00000493814 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
C1orf43-209ENST00000493814 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
C1orf43-209ENST00000493814 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
C1orf43-209ENST00000493814 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
C1orf43-209ENST00000493814 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
C1orf43-209ENST00000493814 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
C1orf43-209ENST00000493814 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
C1orf43-209ENST00000493814 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
C1orf43-209ENST00000493814 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
C1orf43-209ENST00000493814 NUP160Q12769 1436 aa15.82■□□□□ 0.12
C1orf43-209ENST00000493814 CUL7Q14999 1698 aa15.81■□□□□ 0.12
C1orf43-209ENST00000493814 SHROOM2Q13796 1616 aa15.8■□□□□ 0.12
C1orf43-209ENST00000493814 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
C1orf43-209ENST00000493814 RUSC2Q8N2Y8 1516 aa15.75■□□□□ 0.11
C1orf43-209ENST00000493814 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
C1orf43-209ENST00000493814 IGF1RP08069 1367 aa15.7■□□□□ 0.1
C1orf43-209ENST00000493814 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms