RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
TRAPPC12-222ENST00000493792 ABCC9O60706 1549 aa23.14■■□□□ 1.3
TRAPPC12-222ENST00000493792 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
TRAPPC12-222ENST00000493792 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
TRAPPC12-222ENST00000493792 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
TRAPPC12-222ENST00000493792 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRAPPC12-222ENST00000493792 NACADO15069 1562 aa21.53■■□□□ 1.04
TRAPPC12-222ENST00000493792 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
TRAPPC12-222ENST00000493792 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
TRAPPC12-222ENST00000493792 UNC13AQ9UPW8 1703 aa21.15■□□□□ 0.98
TRAPPC12-222ENST00000493792 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
TRAPPC12-222ENST00000493792 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.94
TRAPPC12-222ENST00000493792 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
TRAPPC12-222ENST00000493792 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
TRAPPC12-222ENST00000493792 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
TRAPPC12-222ENST00000493792 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
TRAPPC12-222ENST00000493792 DNAJC5Q9H3Z4 198 aa20.77■□□□□ 0.92
TRAPPC12-222ENST00000493792 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
TRAPPC12-222ENST00000493792 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
TRAPPC12-222ENST00000493792 CUX2O14529 1486 aa20.09■□□□□ 0.81
TRAPPC12-222ENST00000493792 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
TRAPPC12-222ENST00000493792 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
TRAPPC12-222ENST00000493792 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
TRAPPC12-222ENST00000493792 NESP48681 1621 aa19.78■□□□□ 0.76
TRAPPC12-222ENST00000493792 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
TRAPPC12-222ENST00000493792 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
TRAPPC12-222ENST00000493792 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
TRAPPC12-222ENST00000493792 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
TRAPPC12-222ENST00000493792 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
TRAPPC12-222ENST00000493792 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
TRAPPC12-222ENST00000493792 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC12-222ENST00000493792 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
TRAPPC12-222ENST00000493792 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
TRAPPC12-222ENST00000493792 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
TRAPPC12-222ENST00000493792 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
TRAPPC12-222ENST00000493792 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
TRAPPC12-222ENST00000493792 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
TRAPPC12-222ENST00000493792 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
TRAPPC12-222ENST00000493792 OSCARQ8IYS5 282 aa19.23■□□□□ 0.67
TRAPPC12-222ENST00000493792 WDR62O43379 1518 aa19.22■□□□□ 0.67
TRAPPC12-222ENST00000493792 WIZO95785 1651 aa19.15■□□□□ 0.66
TRAPPC12-222ENST00000493792 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC12-222ENST00000493792 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
TRAPPC12-222ENST00000493792 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
TRAPPC12-222ENST00000493792 CFTRP13569 1480 aa19.03■□□□□ 0.64
TRAPPC12-222ENST00000493792 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
TRAPPC12-222ENST00000493792 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
TRAPPC12-222ENST00000493792 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
TRAPPC12-222ENST00000493792 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
TRAPPC12-222ENST00000493792 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
TRAPPC12-222ENST00000493792 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC12-222ENST00000493792 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
TRAPPC12-222ENST00000493792 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
TRAPPC12-222ENST00000493792 IFT140Q96RY7 1462 aa18.77■□□□□ 0.59
TRAPPC12-222ENST00000493792 SUPT5HO00267 1087 aaKnown RBP18.76■□□□□ 0.59
TRAPPC12-222ENST00000493792 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
TRAPPC12-222ENST00000493792 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC12-222ENST00000493792 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
TRAPPC12-222ENST00000493792 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAPPC12-222ENST00000493792 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
TRAPPC12-222ENST00000493792 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
TRAPPC12-222ENST00000493792 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
TRAPPC12-222ENST00000493792 FBLN2P98095 1184 aa18.57■□□□□ 0.56
TRAPPC12-222ENST00000493792 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
TRAPPC12-222ENST00000493792 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-222ENST00000493792 DNMBPQ6XZF7 1577 aa18.48■□□□□ 0.55
TRAPPC12-222ENST00000493792 TDRD9Q8NDG6 1382 aaKnown RBP18.46■□□□□ 0.55
TRAPPC12-222ENST00000493792 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
TRAPPC12-222ENST00000493792 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
TRAPPC12-222ENST00000493792 CHD1O14646 1710 aa18.43■□□□□ 0.54
TRAPPC12-222ENST00000493792 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC12-222ENST00000493792 SOGA1O94964 1423 aa18.4■□□□□ 0.54
TRAPPC12-222ENST00000493792 CHMP7Q8WUX9 453 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC12-222ENST00000493792 CLASP1Q7Z460 1538 aa18.34■□□□□ 0.53
TRAPPC12-222ENST00000493792 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.53
TRAPPC12-222ENST00000493792 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
TRAPPC12-222ENST00000493792 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-222ENST00000493792 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
TRAPPC12-222ENST00000493792 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
TRAPPC12-222ENST00000493792 SYNJ2O15056 1496 aa18.23■□□□□ 0.51
TRAPPC12-222ENST00000493792 CUX1P39880 1505 aa18.23■□□□□ 0.51
TRAPPC12-222ENST00000493792 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
TRAPPC12-222ENST00000493792 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
TRAPPC12-222ENST00000493792 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
TRAPPC12-222ENST00000493792 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
TRAPPC12-222ENST00000493792 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
TRAPPC12-222ENST00000493792 NUP160Q12769 1436 aa18■□□□□ 0.47
TRAPPC12-222ENST00000493792 GRIN2AQ12879 1464 aa18■□□□□ 0.47
TRAPPC12-222ENST00000493792 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
TRAPPC12-222ENST00000493792 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
TRAPPC12-222ENST00000493792 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
TRAPPC12-222ENST00000493792 CEP170Q5SW79 1584 aa17.96■□□□□ 0.46
TRAPPC12-222ENST00000493792 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
TRAPPC12-222ENST00000493792 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
TRAPPC12-222ENST00000493792 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.46
TRAPPC12-222ENST00000493792 FAM69CQ0P6D2 419 aa17.88■□□□□ 0.45
TRAPPC12-222ENST00000493792 KDM4FA0A1W2PPD8 638 aa17.87■□□□□ 0.45
TRAPPC12-222ENST00000493792 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
TRAPPC12-222ENST00000493792 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC12-222ENST00000493792 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms