RNA–Protein interactions for RNA: ENST00000493698.1

TFIP11-215, Transcript of tuftelin interacting protein 11, humanhuman

TSL 3

Gene TFIP11, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFIP11-215ENST00000493698 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
TFIP11-215ENST00000493698 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
TFIP11-215ENST00000493698 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
TFIP11-215ENST00000493698 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
TFIP11-215ENST00000493698 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
TFIP11-215ENST00000493698 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
TFIP11-215ENST00000493698 ABCC9O60706 1549 aa21.58■■□□□ 1.04
TFIP11-215ENST00000493698 NACADO15069 1562 aa21.04■□□□□ 0.96
TFIP11-215ENST00000493698 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
TFIP11-215ENST00000493698 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
TFIP11-215ENST00000493698 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
TFIP11-215ENST00000493698 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
TFIP11-215ENST00000493698 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
TFIP11-215ENST00000493698 FOXD1Q16676 465 aa20.63■□□□□ 0.89
TFIP11-215ENST00000493698 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
TFIP11-215ENST00000493698 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
TFIP11-215ENST00000493698 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
TFIP11-215ENST00000493698 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
TFIP11-215ENST00000493698 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
TFIP11-215ENST00000493698 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
TFIP11-215ENST00000493698 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
TFIP11-215ENST00000493698 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
TFIP11-215ENST00000493698 ADRA2BP18089 450 aa19.72■□□□□ 0.75
TFIP11-215ENST00000493698 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
TFIP11-215ENST00000493698 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
TFIP11-215ENST00000493698 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
TFIP11-215ENST00000493698 CECR2Q9BXF3 1484 aa19.45■□□□□ 0.7
TFIP11-215ENST00000493698 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
TFIP11-215ENST00000493698 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
TFIP11-215ENST00000493698 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
TFIP11-215ENST00000493698 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
TFIP11-215ENST00000493698 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
TFIP11-215ENST00000493698 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
TFIP11-215ENST00000493698 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
TFIP11-215ENST00000493698 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
TFIP11-215ENST00000493698 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
TFIP11-215ENST00000493698 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
TFIP11-215ENST00000493698 WIZO95785 1651 aa19.15■□□□□ 0.66
TFIP11-215ENST00000493698 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
TFIP11-215ENST00000493698 MSH5O43196 834 aa18.98■□□□□ 0.63
TFIP11-215ENST00000493698 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
TFIP11-215ENST00000493698 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
TFIP11-215ENST00000493698 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
TFIP11-215ENST00000493698 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
TFIP11-215ENST00000493698 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
TFIP11-215ENST00000493698 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
TFIP11-215ENST00000493698 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
TFIP11-215ENST00000493698 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
TFIP11-215ENST00000493698 CFTRP13569 1480 aa18.69■□□□□ 0.58
TFIP11-215ENST00000493698 NESP48681 1621 aa18.67■□□□□ 0.58
TFIP11-215ENST00000493698 KIF21AQ7Z4S6 1674 aa18.59■□□□□ 0.57
TFIP11-215ENST00000493698 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
TFIP11-215ENST00000493698 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
TFIP11-215ENST00000493698 CUX2O14529 1486 aa18.5■□□□□ 0.55
TFIP11-215ENST00000493698 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
TFIP11-215ENST00000493698 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
TFIP11-215ENST00000493698 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
TFIP11-215ENST00000493698 WDR62O43379 1518 aa18.42■□□□□ 0.54
TFIP11-215ENST00000493698 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
TFIP11-215ENST00000493698 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
TFIP11-215ENST00000493698 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
TFIP11-215ENST00000493698 IFT140Q96RY7 1462 aa18.17■□□□□ 0.5
TFIP11-215ENST00000493698 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
TFIP11-215ENST00000493698 BIVM-ERCC5R4GMW8 1640 aa18.15■□□□□ 0.5
TFIP11-215ENST00000493698 CUX1P39880 1505 aa18.14■□□□□ 0.49
TFIP11-215ENST00000493698 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
TFIP11-215ENST00000493698 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
TFIP11-215ENST00000493698 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
TFIP11-215ENST00000493698 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
TFIP11-215ENST00000493698 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
TFIP11-215ENST00000493698 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
TFIP11-215ENST00000493698 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
TFIP11-215ENST00000493698 SOGA1O94964 1423 aa18.04■□□□□ 0.48
TFIP11-215ENST00000493698 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
TFIP11-215ENST00000493698 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
TFIP11-215ENST00000493698 MAPK8IP2Q13387 824 aaPredicted RBP17.96■□□□□ 0.47
TFIP11-215ENST00000493698 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
TFIP11-215ENST00000493698 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
TFIP11-215ENST00000493698 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
TFIP11-215ENST00000493698 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
TFIP11-215ENST00000493698 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
TFIP11-215ENST00000493698 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
TFIP11-215ENST00000493698 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
TFIP11-215ENST00000493698 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
TFIP11-215ENST00000493698 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
TFIP11-215ENST00000493698 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
TFIP11-215ENST00000493698 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
TFIP11-215ENST00000493698 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
TFIP11-215ENST00000493698 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
TFIP11-215ENST00000493698 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
TFIP11-215ENST00000493698 CUL7Q14999 1698 aa17.74■□□□□ 0.43
TFIP11-215ENST00000493698 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
TFIP11-215ENST00000493698 CHD1O14646 1710 aa17.72■□□□□ 0.43
TFIP11-215ENST00000493698 ADAMTS12P58397 1594 aa17.72■□□□□ 0.43
TFIP11-215ENST00000493698 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
TFIP11-215ENST00000493698 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
TFIP11-215ENST00000493698 EEA1Q15075 1411 aa17.66■□□□□ 0.42
TFIP11-215ENST00000493698 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
TFIP11-215ENST00000493698 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
TFIP11-215ENST00000493698 FBLN2P98095 1184 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms