RNA–Protein interactions for RNA: ENST00000493690.1

LRMDA-207, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 5

Gene LRMDA, Length 257 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-207ENST00000493690 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
LRMDA-207ENST00000493690 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
LRMDA-207ENST00000493690 ABCC9O60706 1549 aa19■□□□□ 0.63
LRMDA-207ENST00000493690 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
LRMDA-207ENST00000493690 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
LRMDA-207ENST00000493690 NACADO15069 1562 aa18.38■□□□□ 0.53
LRMDA-207ENST00000493690 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
LRMDA-207ENST00000493690 RB1CC1Q8TDY2 1594 aa18.36■□□□□ 0.53
LRMDA-207ENST00000493690 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
LRMDA-207ENST00000493690 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
LRMDA-207ENST00000493690 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
LRMDA-207ENST00000493690 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
LRMDA-207ENST00000493690 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
LRMDA-207ENST00000493690 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
LRMDA-207ENST00000493690 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
LRMDA-207ENST00000493690 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
LRMDA-207ENST00000493690 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
LRMDA-207ENST00000493690 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
LRMDA-207ENST00000493690 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
LRMDA-207ENST00000493690 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
LRMDA-207ENST00000493690 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
LRMDA-207ENST00000493690 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
LRMDA-207ENST00000493690 WIZO95785 1651 aa17.05■□□□□ 0.32
LRMDA-207ENST00000493690 SMARCA2P51531 1590 aa17.02■□□□□ 0.32
LRMDA-207ENST00000493690 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
LRMDA-207ENST00000493690 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
LRMDA-207ENST00000493690 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
LRMDA-207ENST00000493690 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
LRMDA-207ENST00000493690 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
LRMDA-207ENST00000493690 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
LRMDA-207ENST00000493690 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
LRMDA-207ENST00000493690 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
LRMDA-207ENST00000493690 NESP48681 1621 aa16.52■□□□□ 0.24
LRMDA-207ENST00000493690 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
LRMDA-207ENST00000493690 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
LRMDA-207ENST00000493690 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
LRMDA-207ENST00000493690 CFTRP13569 1480 aa16.43■□□□□ 0.22
LRMDA-207ENST00000493690 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
LRMDA-207ENST00000493690 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
LRMDA-207ENST00000493690 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
LRMDA-207ENST00000493690 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
LRMDA-207ENST00000493690 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
LRMDA-207ENST00000493690 THOC2Q8NI27 1593 aaKnown RBP16.2■□□□□ 0.18
LRMDA-207ENST00000493690 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
LRMDA-207ENST00000493690 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
LRMDA-207ENST00000493690 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.18
LRMDA-207ENST00000493690 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
LRMDA-207ENST00000493690 WDR62O43379 1518 aa16.1■□□□□ 0.17
LRMDA-207ENST00000493690 CUX1P39880 1505 aa16.1■□□□□ 0.17
LRMDA-207ENST00000493690 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
LRMDA-207ENST00000493690 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
LRMDA-207ENST00000493690 SYNJ1O43426 1573 aa16.08■□□□□ 0.16
LRMDA-207ENST00000493690 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
LRMDA-207ENST00000493690 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
LRMDA-207ENST00000493690 CUX2O14529 1486 aa15.99■□□□□ 0.15
LRMDA-207ENST00000493690 FGD5Q6ZNL6 1462 aa15.99■□□□□ 0.15
LRMDA-207ENST00000493690 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
LRMDA-207ENST00000493690 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
LRMDA-207ENST00000493690 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
LRMDA-207ENST00000493690 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
LRMDA-207ENST00000493690 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
LRMDA-207ENST00000493690 SOGA1O94964 1423 aa15.91■□□□□ 0.14
LRMDA-207ENST00000493690 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
LRMDA-207ENST00000493690 WDR97A6NE52 1622 aa15.87■□□□□ 0.13
LRMDA-207ENST00000493690 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
LRMDA-207ENST00000493690 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
LRMDA-207ENST00000493690 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
LRMDA-207ENST00000493690 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
LRMDA-207ENST00000493690 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.12
LRMDA-207ENST00000493690 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
LRMDA-207ENST00000493690 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
LRMDA-207ENST00000493690 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
LRMDA-207ENST00000493690 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
LRMDA-207ENST00000493690 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
LRMDA-207ENST00000493690 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
LRMDA-207ENST00000493690 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
LRMDA-207ENST00000493690 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
LRMDA-207ENST00000493690 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
LRMDA-207ENST00000493690 IGF1RP08069 1367 aa15.61■□□□□ 0.09
LRMDA-207ENST00000493690 CHD1O14646 1710 aa15.6■□□□□ 0.09
LRMDA-207ENST00000493690 ADAMTS12P58397 1594 aa15.6■□□□□ 0.09
LRMDA-207ENST00000493690 CUL7Q14999 1698 aa15.6■□□□□ 0.09
LRMDA-207ENST00000493690 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
LRMDA-207ENST00000493690 EEA1Q15075 1411 aa15.59■□□□□ 0.09
LRMDA-207ENST00000493690 FBLN2P98095 1184 aa15.57■□□□□ 0.08
LRMDA-207ENST00000493690 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
LRMDA-207ENST00000493690 SYNJ2O15056 1496 aa15.54■□□□□ 0.08
LRMDA-207ENST00000493690 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
LRMDA-207ENST00000493690 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
LRMDA-207ENST00000493690 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
LRMDA-207ENST00000493690 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
LRMDA-207ENST00000493690 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
LRMDA-207ENST00000493690 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
LRMDA-207ENST00000493690 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
LRMDA-207ENST00000493690 KIF21BO75037 1637 aa15.46■□□□□ 0.06
LRMDA-207ENST00000493690 CEP170Q5SW79 1584 aa15.43■□□□□ 0.06
LRMDA-207ENST00000493690 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
LRMDA-207ENST00000493690 CTTNBP2Q8WZ74 1663 aa15.4■□□□□ 0.06
LRMDA-207ENST00000493690 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
LRMDA-207ENST00000493690 NUP160Q12769 1436 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms