RNA–Protein interactions for RNA: ENST00000493672.1

SNRNP25-207, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-207ENST00000493672 NISCHQ9Y2I1 1504 aa29.77■■■□□ 2.36
SNRNP25-207ENST00000493672 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
SNRNP25-207ENST00000493672 ABCC9O60706 1549 aa26.17■■□□□ 1.78
SNRNP25-207ENST00000493672 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
SNRNP25-207ENST00000493672 NACADO15069 1562 aa25.06■■□□□ 1.6
SNRNP25-207ENST00000493672 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
SNRNP25-207ENST00000493672 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
SNRNP25-207ENST00000493672 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
SNRNP25-207ENST00000493672 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
SNRNP25-207ENST00000493672 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
SNRNP25-207ENST00000493672 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
SNRNP25-207ENST00000493672 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.48
SNRNP25-207ENST00000493672 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
SNRNP25-207ENST00000493672 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
SNRNP25-207ENST00000493672 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
SNRNP25-207ENST00000493672 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
SNRNP25-207ENST00000493672 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
SNRNP25-207ENST00000493672 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
SNRNP25-207ENST00000493672 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
SNRNP25-207ENST00000493672 BAZ1AQ9NRL2 1556 aaPredicted RBP23.12■■□□□ 1.29
SNRNP25-207ENST00000493672 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
SNRNP25-207ENST00000493672 SMARCA2P51531 1590 aa23.07■■□□□ 1.28
SNRNP25-207ENST00000493672 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
SNRNP25-207ENST00000493672 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
SNRNP25-207ENST00000493672 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
SNRNP25-207ENST00000493672 MROH2BQ7Z745 1585 aa22.91■■□□□ 1.26
SNRNP25-207ENST00000493672 BAZ1BQ9UIG0 1483 aaKnown RBP22.88■■□□□ 1.25
SNRNP25-207ENST00000493672 WIZO95785 1651 aa22.65■■□□□ 1.22
SNRNP25-207ENST00000493672 ERCC6Q03468 1493 aa22.61■■□□□ 1.21
SNRNP25-207ENST00000493672 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
SNRNP25-207ENST00000493672 NESP48681 1621 aa22.57■■□□□ 1.2
SNRNP25-207ENST00000493672 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
SNRNP25-207ENST00000493672 CUX2O14529 1486 aa22.48■■□□□ 1.19
SNRNP25-207ENST00000493672 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
SNRNP25-207ENST00000493672 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
SNRNP25-207ENST00000493672 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
SNRNP25-207ENST00000493672 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
SNRNP25-207ENST00000493672 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
SNRNP25-207ENST00000493672 CFTRP13569 1480 aa22.24■■□□□ 1.15
SNRNP25-207ENST00000493672 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
SNRNP25-207ENST00000493672 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
SNRNP25-207ENST00000493672 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
SNRNP25-207ENST00000493672 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
SNRNP25-207ENST00000493672 WDR62O43379 1518 aa22.11■■□□□ 1.13
SNRNP25-207ENST00000493672 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
SNRNP25-207ENST00000493672 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
SNRNP25-207ENST00000493672 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
SNRNP25-207ENST00000493672 SUPT5HO00267 1087 aaKnown RBP21.83■■□□□ 1.09
SNRNP25-207ENST00000493672 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
SNRNP25-207ENST00000493672 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
SNRNP25-207ENST00000493672 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
SNRNP25-207ENST00000493672 IFT140Q96RY7 1462 aa21.72■■□□□ 1.07
SNRNP25-207ENST00000493672 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
SNRNP25-207ENST00000493672 POLA1P09884 1462 aaPredicted RBP21.57■■□□□ 1.04
SNRNP25-207ENST00000493672 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
SNRNP25-207ENST00000493672 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
SNRNP25-207ENST00000493672 CUX1P39880 1505 aa21.5■■□□□ 1.03
SNRNP25-207ENST00000493672 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
SNRNP25-207ENST00000493672 SOGA1O94964 1423 aa21.49■■□□□ 1.03
SNRNP25-207ENST00000493672 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
SNRNP25-207ENST00000493672 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
SNRNP25-207ENST00000493672 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.021e-7■■■■■ 59
SNRNP25-207ENST00000493672 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
SNRNP25-207ENST00000493672 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
SNRNP25-207ENST00000493672 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
SNRNP25-207ENST00000493672 TOP2BQ02880 1626 aa21.29■■□□□ 1
SNRNP25-207ENST00000493672 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
SNRNP25-207ENST00000493672 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
SNRNP25-207ENST00000493672 GRIN2BQ13224 1484 aa21.28■■□□□ 1
SNRNP25-207ENST00000493672 CHD1O14646 1710 aa21.28■■□□□ 1
SNRNP25-207ENST00000493672 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
SNRNP25-207ENST00000493672 FBLN2P98095 1184 aa21.25■□□□□ 0.99
SNRNP25-207ENST00000493672 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
SNRNP25-207ENST00000493672 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
SNRNP25-207ENST00000493672 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
SNRNP25-207ENST00000493672 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
SNRNP25-207ENST00000493672 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
SNRNP25-207ENST00000493672 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
SNRNP25-207ENST00000493672 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
SNRNP25-207ENST00000493672 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
SNRNP25-207ENST00000493672 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
SNRNP25-207ENST00000493672 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
SNRNP25-207ENST00000493672 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
SNRNP25-207ENST00000493672 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
SNRNP25-207ENST00000493672 CLASP1Q7Z460 1538 aa21.05■□□□□ 0.96
SNRNP25-207ENST00000493672 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
SNRNP25-207ENST00000493672 ADAMTS12P58397 1594 aa21.02■□□□□ 0.96
SNRNP25-207ENST00000493672 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
SNRNP25-207ENST00000493672 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
SNRNP25-207ENST00000493672 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
SNRNP25-207ENST00000493672 ARAP1Q96P48 1450 aa20.93■□□□□ 0.94
SNRNP25-207ENST00000493672 NUP160Q12769 1436 aa20.91■□□□□ 0.94
SNRNP25-207ENST00000493672 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
SNRNP25-207ENST00000493672 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
SNRNP25-207ENST00000493672 IGF1RP08069 1367 aa20.83■□□□□ 0.92
SNRNP25-207ENST00000493672 CUL7Q14999 1698 aa20.81■□□□□ 0.92
SNRNP25-207ENST00000493672 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
SNRNP25-207ENST00000493672 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
SNRNP25-207ENST00000493672 CARMIL1Q5VZK9 1371 aa20.71■□□□□ 0.91
SNRNP25-207ENST00000493672 JPH4Q96JJ6 628 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms