RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 NISCHQ9Y2I1 1504 aa31.17■■■□□ 2.58
SAMM50-205ENST00000493621 ABCC9O60706 1549 aa28.21■■■□□ 2.11
SAMM50-205ENST00000493621 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
SAMM50-205ENST00000493621 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
SAMM50-205ENST00000493621 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
SAMM50-205ENST00000493621 NACADO15069 1562 aa26.54■■□□□ 1.84
SAMM50-205ENST00000493621 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
SAMM50-205ENST00000493621 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
SAMM50-205ENST00000493621 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
SAMM50-205ENST00000493621 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
SAMM50-205ENST00000493621 BICRAQ9NZM4 1560 aa26.01■■□□□ 1.75
SAMM50-205ENST00000493621 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
SAMM50-205ENST00000493621 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
SAMM50-205ENST00000493621 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
SAMM50-205ENST00000493621 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
SAMM50-205ENST00000493621 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
SAMM50-205ENST00000493621 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
SAMM50-205ENST00000493621 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
SAMM50-205ENST00000493621 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
SAMM50-205ENST00000493621 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
SAMM50-205ENST00000493621 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
SAMM50-205ENST00000493621 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
SAMM50-205ENST00000493621 ERCC6Q03468 1493 aa24.37■■□□□ 1.49
SAMM50-205ENST00000493621 CUX2O14529 1486 aa24.35■■□□□ 1.49
SAMM50-205ENST00000493621 SMARCA2P51531 1590 aa24.33■■□□□ 1.49
SAMM50-205ENST00000493621 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
SAMM50-205ENST00000493621 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.47
SAMM50-205ENST00000493621 NESP48681 1621 aa24.19■■□□□ 1.46
SAMM50-205ENST00000493621 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
SAMM50-205ENST00000493621 PEG3Q9GZU2 1588 aa24.1■■□□□ 1.45
SAMM50-205ENST00000493621 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
SAMM50-205ENST00000493621 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
SAMM50-205ENST00000493621 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
SAMM50-205ENST00000493621 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
SAMM50-205ENST00000493621 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
SAMM50-205ENST00000493621 WIZO95785 1651 aa23.76■■□□□ 1.39
SAMM50-205ENST00000493621 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
SAMM50-205ENST00000493621 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
SAMM50-205ENST00000493621 WDR62O43379 1518 aa23.6■■□□□ 1.37
SAMM50-205ENST00000493621 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
SAMM50-205ENST00000493621 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
SAMM50-205ENST00000493621 RSF1Q96T23 1441 aaPredicted RBP23.46■■□□□ 1.35
SAMM50-205ENST00000493621 CFTRP13569 1480 aa23.43■■□□□ 1.34
SAMM50-205ENST00000493621 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
SAMM50-205ENST00000493621 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
SAMM50-205ENST00000493621 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
SAMM50-205ENST00000493621 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
SAMM50-205ENST00000493621 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
SAMM50-205ENST00000493621 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
SAMM50-205ENST00000493621 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
SAMM50-205ENST00000493621 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
SAMM50-205ENST00000493621 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
SAMM50-205ENST00000493621 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
SAMM50-205ENST00000493621 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
SAMM50-205ENST00000493621 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
SAMM50-205ENST00000493621 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
SAMM50-205ENST00000493621 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
SAMM50-205ENST00000493621 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
SAMM50-205ENST00000493621 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
SAMM50-205ENST00000493621 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
SAMM50-205ENST00000493621 CHD1O14646 1710 aa22.83■■□□□ 1.25
SAMM50-205ENST00000493621 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
SAMM50-205ENST00000493621 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
SAMM50-205ENST00000493621 FBLN2P98095 1184 aa22.71■■□□□ 1.23
SAMM50-205ENST00000493621 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
SAMM50-205ENST00000493621 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
SAMM50-205ENST00000493621 SOGA1O94964 1423 aa22.67■■□□□ 1.22
SAMM50-205ENST00000493621 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
SAMM50-205ENST00000493621 FGD5Q6ZNL6 1462 aa22.63■■□□□ 1.21
SAMM50-205ENST00000493621 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
SAMM50-205ENST00000493621 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
SAMM50-205ENST00000493621 CUX1P39880 1505 aa22.59■■□□□ 1.21
SAMM50-205ENST00000493621 WDR97A6NE52 1622 aa22.59■■□□□ 1.21
SAMM50-205ENST00000493621 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.19
SAMM50-205ENST00000493621 MAGI1Q96QZ7 1491 aaPredicted RBP22.5■■□□□ 1.19
SAMM50-205ENST00000493621 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
SAMM50-205ENST00000493621 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
SAMM50-205ENST00000493621 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
SAMM50-205ENST00000493621 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
SAMM50-205ENST00000493621 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
SAMM50-205ENST00000493621 SYNJ2O15056 1496 aa22.44■■□□□ 1.18
SAMM50-205ENST00000493621 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
SAMM50-205ENST00000493621 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
SAMM50-205ENST00000493621 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
SAMM50-205ENST00000493621 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
SAMM50-205ENST00000493621 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
SAMM50-205ENST00000493621 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
SAMM50-205ENST00000493621 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.15
SAMM50-205ENST00000493621 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
SAMM50-205ENST00000493621 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
SAMM50-205ENST00000493621 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
SAMM50-205ENST00000493621 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
SAMM50-205ENST00000493621 NUP160Q12769 1436 aa22.13■■□□□ 1.13
SAMM50-205ENST00000493621 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
SAMM50-205ENST00000493621 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
SAMM50-205ENST00000493621 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
SAMM50-205ENST00000493621 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
SAMM50-205ENST00000493621 PRG4Q92954 1404 aaPredicted RBP21.94■■□□□ 1.1
SAMM50-205ENST00000493621 KIF13AQ9H1H9 1805 aa21.9■■□□□ 1.1
SAMM50-205ENST00000493621 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms