RNA–Protein interactions for RNA: ENST00000493606.1

ARFGAP3-206, Transcript of ADP ribosylation factor GTPase activating protein 3, humanhuman

TSL 2

Gene ARFGAP3, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3-206ENST00000493606 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
ARFGAP3-206ENST00000493606 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
ARFGAP3-206ENST00000493606 ABCC9O60706 1549 aa31.35■■■□□ 2.61
ARFGAP3-206ENST00000493606 RB1CC1Q8TDY2 1594 aa29.82■■■□□ 2.36
ARFGAP3-206ENST00000493606 NACADO15069 1562 aa29.62■■■□□ 2.33
ARFGAP3-206ENST00000493606 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
ARFGAP3-206ENST00000493606 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
ARFGAP3-206ENST00000493606 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
ARFGAP3-206ENST00000493606 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
ARFGAP3-206ENST00000493606 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.26
ARFGAP3-206ENST00000493606 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
ARFGAP3-206ENST00000493606 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
ARFGAP3-206ENST00000493606 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
ARFGAP3-206ENST00000493606 SCRIBQ14160 1630 aa28.63■■■□□ 2.17
ARFGAP3-206ENST00000493606 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
ARFGAP3-206ENST00000493606 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
ARFGAP3-206ENST00000493606 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
ARFGAP3-206ENST00000493606 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
ARFGAP3-206ENST00000493606 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
ARFGAP3-206ENST00000493606 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
ARFGAP3-206ENST00000493606 ATAD2BQ9ULI0 1458 aa27.28■■□□□ 1.96
ARFGAP3-206ENST00000493606 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
ARFGAP3-206ENST00000493606 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
ARFGAP3-206ENST00000493606 BAZ1AQ9NRL2 1556 aaPredicted RBP27.11■■□□□ 1.93
ARFGAP3-206ENST00000493606 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
ARFGAP3-206ENST00000493606 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
ARFGAP3-206ENST00000493606 NESP48681 1621 aa26.99■■□□□ 1.91
ARFGAP3-206ENST00000493606 ERCC6Q03468 1493 aa26.99■■□□□ 1.91
ARFGAP3-206ENST00000493606 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
ARFGAP3-206ENST00000493606 CUX2O14529 1486 aa26.97■■□□□ 1.91
ARFGAP3-206ENST00000493606 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
ARFGAP3-206ENST00000493606 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
ARFGAP3-206ENST00000493606 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
ARFGAP3-206ENST00000493606 WIZO95785 1651 aa26.7■■□□□ 1.86
ARFGAP3-206ENST00000493606 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
ARFGAP3-206ENST00000493606 PDS5BQ9NTI5 1447 aa26.5■■□□□ 1.83
ARFGAP3-206ENST00000493606 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
ARFGAP3-206ENST00000493606 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
ARFGAP3-206ENST00000493606 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
ARFGAP3-206ENST00000493606 WDR62O43379 1518 aa26.33■■□□□ 1.81
ARFGAP3-206ENST00000493606 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
ARFGAP3-206ENST00000493606 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
ARFGAP3-206ENST00000493606 CFTRP13569 1480 aa26.23■■□□□ 1.79
ARFGAP3-206ENST00000493606 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
ARFGAP3-206ENST00000493606 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
ARFGAP3-206ENST00000493606 URB2Q14146 1524 aaKnown RBP26.06■■□□□ 1.76
ARFGAP3-206ENST00000493606 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
ARFGAP3-206ENST00000493606 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
ARFGAP3-206ENST00000493606 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
ARFGAP3-206ENST00000493606 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
ARFGAP3-206ENST00000493606 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
ARFGAP3-206ENST00000493606 DNMBPQ6XZF7 1577 aa25.66■■□□□ 1.7
ARFGAP3-206ENST00000493606 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
ARFGAP3-206ENST00000493606 EIF4G3O43432 1585 aaKnown RBP25.62■■□□□ 1.69
ARFGAP3-206ENST00000493606 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
ARFGAP3-206ENST00000493606 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
ARFGAP3-206ENST00000493606 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
ARFGAP3-206ENST00000493606 RIMBP3CA6NJZ7 1639 aa25.49■■□□□ 1.67
ARFGAP3-206ENST00000493606 RIMBP3BA6NNM3 1639 aa25.49■■□□□ 1.67
ARFGAP3-206ENST00000493606 RIMBP3Q9UFD9 1639 aa25.49■■□□□ 1.67
ARFGAP3-206ENST00000493606 CHD1O14646 1710 aa25.46■■□□□ 1.67
ARFGAP3-206ENST00000493606 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.67
ARFGAP3-206ENST00000493606 SUPT5HO00267 1087 aaKnown RBP25.41■■□□□ 1.66
ARFGAP3-206ENST00000493606 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
ARFGAP3-206ENST00000493606 ARHGEF11O15085 1522 aa25.38■■□□□ 1.65
ARFGAP3-206ENST00000493606 CUX1P39880 1505 aa25.35■■□□□ 1.65
ARFGAP3-206ENST00000493606 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
ARFGAP3-206ENST00000493606 SOGA1O94964 1423 aa25.3■■□□□ 1.64
ARFGAP3-206ENST00000493606 TDRD9Q8NDG6 1382 aaKnown RBP25.28■■□□□ 1.64
ARFGAP3-206ENST00000493606 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
ARFGAP3-206ENST00000493606 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
ARFGAP3-206ENST00000493606 FBLN2P98095 1184 aa25.17■■□□□ 1.62
ARFGAP3-206ENST00000493606 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
ARFGAP3-206ENST00000493606 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
ARFGAP3-206ENST00000493606 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
ARFGAP3-206ENST00000493606 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
ARFGAP3-206ENST00000493606 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
ARFGAP3-206ENST00000493606 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
ARFGAP3-206ENST00000493606 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
ARFGAP3-206ENST00000493606 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
ARFGAP3-206ENST00000493606 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
ARFGAP3-206ENST00000493606 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
ARFGAP3-206ENST00000493606 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
ARFGAP3-206ENST00000493606 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
ARFGAP3-206ENST00000493606 CHMP7Q8WUX9 453 aaPredicted RBP24.97■■□□□ 1.59
ARFGAP3-206ENST00000493606 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
ARFGAP3-206ENST00000493606 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
ARFGAP3-206ENST00000493606 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
ARFGAP3-206ENST00000493606 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
ARFGAP3-206ENST00000493606 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
ARFGAP3-206ENST00000493606 ERCC6L2Q5T890 1561 aa24.78■■□□□ 1.56
ARFGAP3-206ENST00000493606 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
ARFGAP3-206ENST00000493606 NUP160Q12769 1436 aa24.74■■□□□ 1.55
ARFGAP3-206ENST00000493606 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
ARFGAP3-206ENST00000493606 SHROOM2Q13796 1616 aa24.69■■□□□ 1.54
ARFGAP3-206ENST00000493606 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
ARFGAP3-206ENST00000493606 RUSC2Q8N2Y8 1516 aa24.53■■□□□ 1.52
ARFGAP3-206ENST00000493606 PRG4Q92954 1404 aaPredicted RBP24.45■■□□□ 1.51
ARFGAP3-206ENST00000493606 CUL7Q14999 1698 aa24.4■■□□□ 1.5
ARFGAP3-206ENST00000493606 KIF27Q86VH2 1401 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms