RNA–Protein interactions for RNA: ENST00000493588.5

NUB1-210, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 3

Gene NUB1, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-210ENST00000493588 NISCHQ9Y2I1 1504 aa36.14■■■■□ 3.38
NUB1-210ENST00000493588 CCDC180Q9P1Z9 1646 aa32.07■■■□□ 2.72
NUB1-210ENST00000493588 ABCC9O60706 1549 aa31.8■■■□□ 2.68
NUB1-210ENST00000493588 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
NUB1-210ENST00000493588 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
NUB1-210ENST00000493588 NACADO15069 1562 aa30.28■■■□□ 2.44
NUB1-210ENST00000493588 ZCCHC6Q5VYS8 1495 aaKnown RBP30.04■■■□□ 2.4
NUB1-210ENST00000493588 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.4
NUB1-210ENST00000493588 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
NUB1-210ENST00000493588 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
NUB1-210ENST00000493588 PABPN1Q86U42 306 aaKnown RBP eCLIP29.78■■■□□ 2.36
NUB1-210ENST00000493588 UNC13AQ9UPW8 1703 aa29.67■■■□□ 2.34
NUB1-210ENST00000493588 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
NUB1-210ENST00000493588 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
NUB1-210ENST00000493588 SCRIBQ14160 1630 aa29.36■■■□□ 2.29
NUB1-210ENST00000493588 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
NUB1-210ENST00000493588 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
NUB1-210ENST00000493588 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
NUB1-210ENST00000493588 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
NUB1-210ENST00000493588 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
NUB1-210ENST00000493588 SMARCA4P51532 1647 aa28.04■■■□□ 2.08
NUB1-210ENST00000493588 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
NUB1-210ENST00000493588 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
NUB1-210ENST00000493588 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.07
NUB1-210ENST00000493588 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
NUB1-210ENST00000493588 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
NUB1-210ENST00000493588 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
NUB1-210ENST00000493588 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
NUB1-210ENST00000493588 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
NUB1-210ENST00000493588 WIZO95785 1651 aa27.55■■■□□ 2
NUB1-210ENST00000493588 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
NUB1-210ENST00000493588 NESP48681 1621 aa27.49■■□□□ 1.99
NUB1-210ENST00000493588 ERCC6Q03468 1493 aa27.34■■□□□ 1.97
NUB1-210ENST00000493588 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
NUB1-210ENST00000493588 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
NUB1-210ENST00000493588 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
NUB1-210ENST00000493588 CUX2O14529 1486 aa27.12■■□□□ 1.93
NUB1-210ENST00000493588 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
NUB1-210ENST00000493588 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.92
NUB1-210ENST00000493588 THOC2Q8NI27 1593 aaKnown RBP27■■□□□ 1.91
NUB1-210ENST00000493588 CFTRP13569 1480 aa26.99■■□□□ 1.91
NUB1-210ENST00000493588 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
NUB1-210ENST00000493588 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
NUB1-210ENST00000493588 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
NUB1-210ENST00000493588 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
NUB1-210ENST00000493588 WDR62O43379 1518 aa26.75■■□□□ 1.87
NUB1-210ENST00000493588 DNAJC5Q9H3Z4 198 aa26.71■■□□□ 1.87
NUB1-210ENST00000493588 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
NUB1-210ENST00000493588 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
NUB1-210ENST00000493588 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
NUB1-210ENST00000493588 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
NUB1-210ENST00000493588 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
NUB1-210ENST00000493588 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
NUB1-210ENST00000493588 ZNF608Q9ULD9 1512 aaPredicted RBP26.28■■□□□ 1.8
NUB1-210ENST00000493588 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
NUB1-210ENST00000493588 POLA1P09884 1462 aaPredicted RBP26.19■■□□□ 1.78
NUB1-210ENST00000493588 CUX1P39880 1505 aa26.16■■□□□ 1.78
NUB1-210ENST00000493588 RAD54L2Q9Y4B4 1467 aa26.14■■□□□ 1.78
NUB1-210ENST00000493588 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.77
NUB1-210ENST00000493588 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.776e-7■■□□□ 13.8
NUB1-210ENST00000493588 SOGA1O94964 1423 aa26.1■■□□□ 1.77
NUB1-210ENST00000493588 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
NUB1-210ENST00000493588 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
NUB1-210ENST00000493588 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
NUB1-210ENST00000493588 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
NUB1-210ENST00000493588 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
NUB1-210ENST00000493588 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
NUB1-210ENST00000493588 FBLN2P98095 1184 aa25.82■■□□□ 1.72
NUB1-210ENST00000493588 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
NUB1-210ENST00000493588 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
NUB1-210ENST00000493588 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
NUB1-210ENST00000493588 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
NUB1-210ENST00000493588 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
NUB1-210ENST00000493588 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
NUB1-210ENST00000493588 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
NUB1-210ENST00000493588 CHD1O14646 1710 aa25.73■■□□□ 1.71
NUB1-210ENST00000493588 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
NUB1-210ENST00000493588 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
NUB1-210ENST00000493588 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
NUB1-210ENST00000493588 ABCA5Q8WWZ7 1642 aa25.68■■□□□ 1.7
NUB1-210ENST00000493588 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
NUB1-210ENST00000493588 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
NUB1-210ENST00000493588 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
NUB1-210ENST00000493588 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
NUB1-210ENST00000493588 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
NUB1-210ENST00000493588 ARHGEF11O15085 1522 aa25.58■■□□□ 1.69
NUB1-210ENST00000493588 CLASP1Q7Z460 1538 aa25.51■■□□□ 1.67
NUB1-210ENST00000493588 CYB5RLQ6IPT4 315 aa25.46■■□□□ 1.67
NUB1-210ENST00000493588 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
NUB1-210ENST00000493588 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.66
NUB1-210ENST00000493588 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.66
NUB1-210ENST00000493588 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
NUB1-210ENST00000493588 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
NUB1-210ENST00000493588 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
NUB1-210ENST00000493588 IGF1RP08069 1367 aa25.38■■□□□ 1.65
NUB1-210ENST00000493588 NUP160Q12769 1436 aa25.37■■□□□ 1.65
NUB1-210ENST00000493588 CEP170Q5SW79 1584 aa25.34■■□□□ 1.65
NUB1-210ENST00000493588 KIF27Q86VH2 1401 aa25.33■■□□□ 1.65
NUB1-210ENST00000493588 ERCC6L2Q5T890 1561 aa25.23■■□□□ 1.63
NUB1-210ENST00000493588 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms