RNA–Protein interactions for RNA: ENST00000493489.1

ATP11A-214, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 3

Gene ATP11A, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-214ENST00000493489 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
ATP11A-214ENST00000493489 ABCC9O60706 1549 aa24.95■■□□□ 1.58
ATP11A-214ENST00000493489 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
ATP11A-214ENST00000493489 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
ATP11A-214ENST00000493489 DNAJC5BQ9UF47 199 aa23.57■■□□□ 1.36
ATP11A-214ENST00000493489 NACADO15069 1562 aa23.48■■□□□ 1.35
ATP11A-214ENST00000493489 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
ATP11A-214ENST00000493489 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
ATP11A-214ENST00000493489 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
ATP11A-214ENST00000493489 MYO15BQ96JP2 1530 aa23.09■■□□□ 1.29
ATP11A-214ENST00000493489 BICRAQ9NZM4 1560 aa23.02■■□□□ 1.28
ATP11A-214ENST00000493489 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
ATP11A-214ENST00000493489 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
ATP11A-214ENST00000493489 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
ATP11A-214ENST00000493489 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
ATP11A-214ENST00000493489 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
ATP11A-214ENST00000493489 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
ATP11A-214ENST00000493489 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
ATP11A-214ENST00000493489 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
ATP11A-214ENST00000493489 NCAPD3P42695 1498 aa21.65■■□□□ 1.06
ATP11A-214ENST00000493489 CUX2O14529 1486 aa21.63■■□□□ 1.05
ATP11A-214ENST00000493489 ERCC6Q03468 1493 aa21.56■■□□□ 1.04
ATP11A-214ENST00000493489 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
ATP11A-214ENST00000493489 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
ATP11A-214ENST00000493489 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
ATP11A-214ENST00000493489 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
ATP11A-214ENST00000493489 NESP48681 1621 aa21.38■■□□□ 1.01
ATP11A-214ENST00000493489 BAZ1AQ9NRL2 1556 aaPredicted RBP21.35■■□□□ 1.01
ATP11A-214ENST00000493489 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
ATP11A-214ENST00000493489 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
ATP11A-214ENST00000493489 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
ATP11A-214ENST00000493489 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
ATP11A-214ENST00000493489 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
ATP11A-214ENST00000493489 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
ATP11A-214ENST00000493489 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
ATP11A-214ENST00000493489 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
ATP11A-214ENST00000493489 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
ATP11A-214ENST00000493489 WDR62O43379 1518 aa20.91■□□□□ 0.94
ATP11A-214ENST00000493489 WIZO95785 1651 aa20.91■□□□□ 0.94
ATP11A-214ENST00000493489 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
ATP11A-214ENST00000493489 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
ATP11A-214ENST00000493489 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
ATP11A-214ENST00000493489 CFTRP13569 1480 aa20.7■□□□□ 0.9
ATP11A-214ENST00000493489 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.9
ATP11A-214ENST00000493489 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
ATP11A-214ENST00000493489 URB2Q14146 1524 aaKnown RBP20.6■□□□□ 0.89
ATP11A-214ENST00000493489 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
ATP11A-214ENST00000493489 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
ATP11A-214ENST00000493489 IFT140Q96RY7 1462 aa20.38■□□□□ 0.85
ATP11A-214ENST00000493489 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
ATP11A-214ENST00000493489 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
ATP11A-214ENST00000493489 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
ATP11A-214ENST00000493489 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
ATP11A-214ENST00000493489 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
ATP11A-214ENST00000493489 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
ATP11A-214ENST00000493489 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
ATP11A-214ENST00000493489 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
ATP11A-214ENST00000493489 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
ATP11A-214ENST00000493489 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
ATP11A-214ENST00000493489 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
ATP11A-214ENST00000493489 CHD1O14646 1710 aa20.19■□□□□ 0.82
ATP11A-214ENST00000493489 AQRO60306 1485 aaKnown RBP eCLIP20.13■□□□□ 0.815e-10■■■■□ 23.2
ATP11A-214ENST00000493489 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
ATP11A-214ENST00000493489 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
ATP11A-214ENST00000493489 CYB5RLQ6IPT4 315 aa20.05■□□□□ 0.8
ATP11A-214ENST00000493489 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
ATP11A-214ENST00000493489 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
ATP11A-214ENST00000493489 FBLN2P98095 1184 aa19.99■□□□□ 0.79
ATP11A-214ENST00000493489 SOGA1O94964 1423 aa19.97■□□□□ 0.79
ATP11A-214ENST00000493489 TDRD9Q8NDG6 1382 aaKnown RBP19.96■□□□□ 0.79
ATP11A-214ENST00000493489 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
ATP11A-214ENST00000493489 FGD5Q6ZNL6 1462 aa19.95■□□□□ 0.78
ATP11A-214ENST00000493489 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
ATP11A-214ENST00000493489 CUX1P39880 1505 aa19.91■□□□□ 0.78
ATP11A-214ENST00000493489 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
ATP11A-214ENST00000493489 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
ATP11A-214ENST00000493489 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
ATP11A-214ENST00000493489 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
ATP11A-214ENST00000493489 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
ATP11A-214ENST00000493489 CHMP7Q8WUX9 453 aaPredicted RBP19.82■□□□□ 0.76
ATP11A-214ENST00000493489 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
ATP11A-214ENST00000493489 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
ATP11A-214ENST00000493489 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
ATP11A-214ENST00000493489 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
ATP11A-214ENST00000493489 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
ATP11A-214ENST00000493489 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
ATP11A-214ENST00000493489 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
ATP11A-214ENST00000493489 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
ATP11A-214ENST00000493489 NUP160Q12769 1436 aa19.57■□□□□ 0.72
ATP11A-214ENST00000493489 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
ATP11A-214ENST00000493489 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
ATP11A-214ENST00000493489 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
ATP11A-214ENST00000493489 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
ATP11A-214ENST00000493489 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
ATP11A-214ENST00000493489 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
ATP11A-214ENST00000493489 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
ATP11A-214ENST00000493489 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
ATP11A-214ENST00000493489 KIF13AQ9H1H9 1805 aa19.41■□□□□ 0.7
ATP11A-214ENST00000493489 PRG4Q92954 1404 aaPredicted RBP19.35■□□□□ 0.69
ATP11A-214ENST00000493489 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms