RNA–Protein interactions for RNA: ENST00000493411.2

CPNE5-204, Transcript of copine 5, humanhuman

TSL 1 (best)

Gene CPNE5, Length 857 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5-204ENST00000493411 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
CPNE5-204ENST00000493411 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
CPNE5-204ENST00000493411 ABCC9O60706 1549 aa27.97■■■□□ 2.07
CPNE5-204ENST00000493411 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
CPNE5-204ENST00000493411 NACADO15069 1562 aa26.71■■□□□ 1.87
CPNE5-204ENST00000493411 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
CPNE5-204ENST00000493411 ZCCHC6Q5VYS8 1495 aaKnown RBP26.48■■□□□ 1.83
CPNE5-204ENST00000493411 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
CPNE5-204ENST00000493411 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
CPNE5-204ENST00000493411 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
CPNE5-204ENST00000493411 PABPN1Q86U42 306 aaKnown RBP eCLIP26.07■■□□□ 1.76
CPNE5-204ENST00000493411 BICRAQ9NZM4 1560 aa26.05■■□□□ 1.76
CPNE5-204ENST00000493411 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
CPNE5-204ENST00000493411 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
CPNE5-204ENST00000493411 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
CPNE5-204ENST00000493411 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
CPNE5-204ENST00000493411 CC2D2AQ9P2K1 1620 aa25.32■■□□□ 1.64
CPNE5-204ENST00000493411 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
CPNE5-204ENST00000493411 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
CPNE5-204ENST00000493411 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
CPNE5-204ENST00000493411 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.53
CPNE5-204ENST00000493411 NCAPD3P42695 1498 aa24.63■■□□□ 1.53
CPNE5-204ENST00000493411 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
CPNE5-204ENST00000493411 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
CPNE5-204ENST00000493411 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
CPNE5-204ENST00000493411 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
CPNE5-204ENST00000493411 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
CPNE5-204ENST00000493411 WIZO95785 1651 aa24.32■■□□□ 1.48
CPNE5-204ENST00000493411 NESP48681 1621 aa24.17■■□□□ 1.46
CPNE5-204ENST00000493411 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
CPNE5-204ENST00000493411 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
CPNE5-204ENST00000493411 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
CPNE5-204ENST00000493411 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
CPNE5-204ENST00000493411 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
CPNE5-204ENST00000493411 CUX2O14529 1486 aa23.89■■□□□ 1.42
CPNE5-204ENST00000493411 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
CPNE5-204ENST00000493411 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
CPNE5-204ENST00000493411 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.4
CPNE5-204ENST00000493411 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
CPNE5-204ENST00000493411 CFTRP13569 1480 aa23.73■■□□□ 1.39
CPNE5-204ENST00000493411 CCDC88BA6NC98 1476 aa23.7■■□□□ 1.38
CPNE5-204ENST00000493411 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
CPNE5-204ENST00000493411 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
CPNE5-204ENST00000493411 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
CPNE5-204ENST00000493411 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.38
CPNE5-204ENST00000493411 WDR62O43379 1518 aa23.6■■□□□ 1.37
CPNE5-204ENST00000493411 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
CPNE5-204ENST00000493411 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
CPNE5-204ENST00000493411 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
CPNE5-204ENST00000493411 DNMBPQ6XZF7 1577 aa23.23■■□□□ 1.31
CPNE5-204ENST00000493411 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
CPNE5-204ENST00000493411 IFT140Q96RY7 1462 aa23.13■■□□□ 1.29
CPNE5-204ENST00000493411 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
CPNE5-204ENST00000493411 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
CPNE5-204ENST00000493411 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
CPNE5-204ENST00000493411 CUX1P39880 1505 aa23.04■■□□□ 1.28
CPNE5-204ENST00000493411 EIF4G3O43432 1585 aaKnown RBP23.03■■□□□ 1.28
CPNE5-204ENST00000493411 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
CPNE5-204ENST00000493411 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
CPNE5-204ENST00000493411 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
CPNE5-204ENST00000493411 SOGA1O94964 1423 aa22.91■■□□□ 1.26
CPNE5-204ENST00000493411 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
CPNE5-204ENST00000493411 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
CPNE5-204ENST00000493411 CHD1O14646 1710 aa22.82■■□□□ 1.24
CPNE5-204ENST00000493411 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
CPNE5-204ENST00000493411 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
CPNE5-204ENST00000493411 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
CPNE5-204ENST00000493411 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
CPNE5-204ENST00000493411 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
CPNE5-204ENST00000493411 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
CPNE5-204ENST00000493411 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
CPNE5-204ENST00000493411 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
CPNE5-204ENST00000493411 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
CPNE5-204ENST00000493411 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
CPNE5-204ENST00000493411 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
CPNE5-204ENST00000493411 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
CPNE5-204ENST00000493411 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
CPNE5-204ENST00000493411 FBLN2P98095 1184 aa22.63■■□□□ 1.21
CPNE5-204ENST00000493411 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
CPNE5-204ENST00000493411 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
CPNE5-204ENST00000493411 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
CPNE5-204ENST00000493411 SYNJ2O15056 1496 aa22.56■■□□□ 1.2
CPNE5-204ENST00000493411 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
CPNE5-204ENST00000493411 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
CPNE5-204ENST00000493411 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
CPNE5-204ENST00000493411 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
CPNE5-204ENST00000493411 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
CPNE5-204ENST00000493411 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
CPNE5-204ENST00000493411 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
CPNE5-204ENST00000493411 CEP170Q5SW79 1584 aa22.36■■□□□ 1.17
CPNE5-204ENST00000493411 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
CPNE5-204ENST00000493411 NUP160Q12769 1436 aa22.31■■□□□ 1.16
CPNE5-204ENST00000493411 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
CPNE5-204ENST00000493411 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
CPNE5-204ENST00000493411 CUL7Q14999 1698 aa22.24■■□□□ 1.15
CPNE5-204ENST00000493411 ERCC6L2Q5T890 1561 aa22.22■■□□□ 1.15
CPNE5-204ENST00000493411 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
CPNE5-204ENST00000493411 IGF1RP08069 1367 aa22.22■■□□□ 1.15
CPNE5-204ENST00000493411 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
CPNE5-204ENST00000493411 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms