RNA–Protein interactions for RNA: ENST00000493404.1

TRIM31-216, Transcript of tripartite motif containing 31, humanhuman

TSL 2

Gene TRIM31, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM31-216ENST00000493404 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
TRIM31-216ENST00000493404 ABCC9O60706 1549 aa21.56■■□□□ 1.04
TRIM31-216ENST00000493404 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
TRIM31-216ENST00000493404 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
TRIM31-216ENST00000493404 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
TRIM31-216ENST00000493404 NACADO15069 1562 aa20.21■□□□□ 0.83
TRIM31-216ENST00000493404 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
TRIM31-216ENST00000493404 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRIM31-216ENST00000493404 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
TRIM31-216ENST00000493404 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
TRIM31-216ENST00000493404 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
TRIM31-216ENST00000493404 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
TRIM31-216ENST00000493404 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
TRIM31-216ENST00000493404 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
TRIM31-216ENST00000493404 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
TRIM31-216ENST00000493404 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
TRIM31-216ENST00000493404 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
TRIM31-216ENST00000493404 EIF4G1Q04637 1599 aaKnown RBP19.32■□□□□ 0.68
TRIM31-216ENST00000493404 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
TRIM31-216ENST00000493404 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
TRIM31-216ENST00000493404 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
TRIM31-216ENST00000493404 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
TRIM31-216ENST00000493404 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
TRIM31-216ENST00000493404 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
TRIM31-216ENST00000493404 CUX2O14529 1486 aa18.52■□□□□ 0.55
TRIM31-216ENST00000493404 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.55
TRIM31-216ENST00000493404 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
TRIM31-216ENST00000493404 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
TRIM31-216ENST00000493404 NESP48681 1621 aa18.45■□□□□ 0.54
TRIM31-216ENST00000493404 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
TRIM31-216ENST00000493404 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
TRIM31-216ENST00000493404 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
TRIM31-216ENST00000493404 PDS5BQ9NTI5 1447 aa18.24■□□□□ 0.51
TRIM31-216ENST00000493404 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
TRIM31-216ENST00000493404 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
TRIM31-216ENST00000493404 WIZO95785 1651 aa18.17■□□□□ 0.5
TRIM31-216ENST00000493404 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
TRIM31-216ENST00000493404 MRC2Q9UBG0 1479 aa18.06■□□□□ 0.48
TRIM31-216ENST00000493404 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
TRIM31-216ENST00000493404 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
TRIM31-216ENST00000493404 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
TRIM31-216ENST00000493404 WDR62O43379 1518 aa17.95■□□□□ 0.46
TRIM31-216ENST00000493404 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
TRIM31-216ENST00000493404 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
TRIM31-216ENST00000493404 CFTRP13569 1480 aa17.87■□□□□ 0.45
TRIM31-216ENST00000493404 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
TRIM31-216ENST00000493404 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
TRIM31-216ENST00000493404 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
TRIM31-216ENST00000493404 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
TRIM31-216ENST00000493404 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
TRIM31-216ENST00000493404 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
TRIM31-216ENST00000493404 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
TRIM31-216ENST00000493404 FBLN2P98095 1184 aa17.56■□□□□ 0.4
TRIM31-216ENST00000493404 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
TRIM31-216ENST00000493404 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
TRIM31-216ENST00000493404 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
TRIM31-216ENST00000493404 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
TRIM31-216ENST00000493404 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
TRIM31-216ENST00000493404 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
TRIM31-216ENST00000493404 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRIM31-216ENST00000493404 CYB5RLQ6IPT4 315 aa17.42■□□□□ 0.38
TRIM31-216ENST00000493404 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
TRIM31-216ENST00000493404 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
TRIM31-216ENST00000493404 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
TRIM31-216ENST00000493404 SOGA1O94964 1423 aa17.38■□□□□ 0.37
TRIM31-216ENST00000493404 CHD1O14646 1710 aa17.38■□□□□ 0.37
TRIM31-216ENST00000493404 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
TRIM31-216ENST00000493404 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
TRIM31-216ENST00000493404 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
TRIM31-216ENST00000493404 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
TRIM31-216ENST00000493404 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
TRIM31-216ENST00000493404 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
TRIM31-216ENST00000493404 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
TRIM31-216ENST00000493404 CUX1P39880 1505 aa17.25■□□□□ 0.35
TRIM31-216ENST00000493404 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
TRIM31-216ENST00000493404 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
TRIM31-216ENST00000493404 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
TRIM31-216ENST00000493404 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
TRIM31-216ENST00000493404 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
TRIM31-216ENST00000493404 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
TRIM31-216ENST00000493404 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
TRIM31-216ENST00000493404 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
TRIM31-216ENST00000493404 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
TRIM31-216ENST00000493404 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
TRIM31-216ENST00000493404 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
TRIM31-216ENST00000493404 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
TRIM31-216ENST00000493404 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
TRIM31-216ENST00000493404 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
TRIM31-216ENST00000493404 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
TRIM31-216ENST00000493404 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
TRIM31-216ENST00000493404 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
TRIM31-216ENST00000493404 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
TRIM31-216ENST00000493404 CEP170Q5SW79 1584 aa16.89■□□□□ 0.3
TRIM31-216ENST00000493404 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
TRIM31-216ENST00000493404 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
TRIM31-216ENST00000493404 NUP160Q12769 1436 aa16.85■□□□□ 0.29
TRIM31-216ENST00000493404 PRG4Q92954 1404 aaPredicted RBP16.82■□□□□ 0.28
TRIM31-216ENST00000493404 NPM1P06748 294 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRIM31-216ENST00000493404 JPH4Q96JJ6 628 aa16.8■□□□□ 0.28
TRIM31-216ENST00000493404 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms