RNA–Protein interactions for RNA: ENST00000493403.1

ARPC1B-221, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-221ENST00000493403 NISCHQ9Y2I1 1504 aa41.97■■■■■ 4.31
ARPC1B-221ENST00000493403 ABCC9O60706 1549 aa38.12■■■■□ 3.69
ARPC1B-221ENST00000493403 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
ARPC1B-221ENST00000493403 RB1CC1Q8TDY2 1594 aa36.28■■■■□ 3.4
ARPC1B-221ENST00000493403 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
ARPC1B-221ENST00000493403 NACADO15069 1562 aa35.97■■■■□ 3.35
ARPC1B-221ENST00000493403 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
ARPC1B-221ENST00000493403 MYO15BQ96JP2 1530 aa35.43■■■■□ 3.26
ARPC1B-221ENST00000493403 PABPN1Q86U42 306 aaKnown RBP eCLIP35.37■■■■□ 3.25
ARPC1B-221ENST00000493403 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
ARPC1B-221ENST00000493403 BICRAQ9NZM4 1560 aa35.1■■■■□ 3.21
ARPC1B-221ENST00000493403 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
ARPC1B-221ENST00000493403 DCAF1Q9Y4B6 1507 aa34.78■■■■□ 3.16
ARPC1B-221ENST00000493403 ZCCHC6Q5VYS8 1495 aaKnown RBP34.7■■■■□ 3.15
ARPC1B-221ENST00000493403 CC2D2AQ9P2K1 1620 aa34.48■■■■□ 3.11
ARPC1B-221ENST00000493403 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
ARPC1B-221ENST00000493403 SCRIBQ14160 1630 aa34.34■■■■□ 3.09
ARPC1B-221ENST00000493403 EIF4G1Q04637 1599 aaKnown RBP34.34■■■■□ 3.09
ARPC1B-221ENST00000493403 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
ARPC1B-221ENST00000493403 CUX2O14529 1486 aa33.22■■■□□ 2.91
ARPC1B-221ENST00000493403 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
ARPC1B-221ENST00000493403 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
ARPC1B-221ENST00000493403 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
ARPC1B-221ENST00000493403 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
ARPC1B-221ENST00000493403 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
ARPC1B-221ENST00000493403 SMARCA4P51532 1647 aa32.81■■■□□ 2.84
ARPC1B-221ENST00000493403 BAZ1AQ9NRL2 1556 aaPredicted RBP32.67■■■□□ 2.82
ARPC1B-221ENST00000493403 BAZ1BQ9UIG0 1483 aaKnown RBP32.63■■■□□ 2.81
ARPC1B-221ENST00000493403 NESP48681 1621 aa32.59■■■□□ 2.81
ARPC1B-221ENST00000493403 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
ARPC1B-221ENST00000493403 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
ARPC1B-221ENST00000493403 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.78
ARPC1B-221ENST00000493403 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
ARPC1B-221ENST00000493403 MROH2BQ7Z745 1585 aa32.24■■■□□ 2.75
ARPC1B-221ENST00000493403 KIF21AQ7Z4S6 1674 aa32.2■■■□□ 2.74
ARPC1B-221ENST00000493403 CADPSQ9ULU8 1353 aa32.13■■■□□ 2.73
ARPC1B-221ENST00000493403 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
ARPC1B-221ENST00000493403 WDR62O43379 1518 aa31.97■■■□□ 2.71
ARPC1B-221ENST00000493403 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
ARPC1B-221ENST00000493403 WIZO95785 1651 aa31.81■■■□□ 2.68
ARPC1B-221ENST00000493403 TRIM41Q8WV44 630 aa31.79■■■□□ 2.68
ARPC1B-221ENST00000493403 FANCD2Q9BXW9 1451 aa31.72■■■□□ 2.67
ARPC1B-221ENST00000493403 CFTRP13569 1480 aa31.68■■■□□ 2.66
ARPC1B-221ENST00000493403 OSCARQ8IYS5 282 aa31.59■■■□□ 2.65
ARPC1B-221ENST00000493403 TOP2AP11388 1531 aaKnown RBP31.5■■■□□ 2.63
ARPC1B-221ENST00000493403 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
ARPC1B-221ENST00000493403 URB2Q14146 1524 aaKnown RBP31.43■■■□□ 2.62
ARPC1B-221ENST00000493403 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
ARPC1B-221ENST00000493403 IFT140Q96RY7 1462 aa31.24■■■□□ 2.59
ARPC1B-221ENST00000493403 ABCC8Q09428 1581 aa31.15■■■□□ 2.58
ARPC1B-221ENST00000493403 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
ARPC1B-221ENST00000493403 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
ARPC1B-221ENST00000493403 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
ARPC1B-221ENST00000493403 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
ARPC1B-221ENST00000493403 TOPBP1Q92547 1522 aa31.07■■■□□ 2.56
ARPC1B-221ENST00000493403 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
ARPC1B-221ENST00000493403 ARHGEF11O15085 1522 aa31.02■■■□□ 2.56
ARPC1B-221ENST00000493403 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
ARPC1B-221ENST00000493403 EIF4G3O43432 1585 aaKnown RBP30.95■■■□□ 2.54
ARPC1B-221ENST00000493403 TARBP1Q13395 1621 aaKnown RBP30.81■■■□□ 2.52
ARPC1B-221ENST00000493403 CYB5RLQ6IPT4 315 aa30.76■■■□□ 2.51
ARPC1B-221ENST00000493403 AQRO60306 1485 aaKnown RBP eCLIP30.76■■■□□ 2.511e-6■■■□□ 18.1
ARPC1B-221ENST00000493403 CHD1O14646 1710 aa30.76■■■□□ 2.51
ARPC1B-221ENST00000493403 POLA1P09884 1462 aaPredicted RBP30.71■■■□□ 2.51
ARPC1B-221ENST00000493403 WDR97A6NE52 1622 aa30.68■■■□□ 2.5
ARPC1B-221ENST00000493403 FBLN2P98095 1184 aa30.65■■■□□ 2.5
ARPC1B-221ENST00000493403 ARAP1Q96P48 1450 aa30.64■■■□□ 2.5
ARPC1B-221ENST00000493403 SOGA1O94964 1423 aa30.59■■■□□ 2.49
ARPC1B-221ENST00000493403 TRHP20396 242 aaPredicted RBP30.58■■■□□ 2.49
ARPC1B-221ENST00000493403 RAD54L2Q9Y4B4 1467 aa30.52■■■□□ 2.48
ARPC1B-221ENST00000493403 TDRD9Q8NDG6 1382 aaKnown RBP30.5■■■□□ 2.47
ARPC1B-221ENST00000493403 MAGI1Q96QZ7 1491 aaPredicted RBP30.5■■■□□ 2.47
ARPC1B-221ENST00000493403 SYNJ1O43426 1573 aa30.48■■■□□ 2.47
ARPC1B-221ENST00000493403 SNAPC4Q5SXM2 1469 aa30.47■■■□□ 2.47
ARPC1B-221ENST00000493403 CLASP1Q7Z460 1538 aa30.46■■■□□ 2.47
ARPC1B-221ENST00000493403 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.47
ARPC1B-221ENST00000493403 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
ARPC1B-221ENST00000493403 GRIN2BQ13224 1484 aa30.42■■■□□ 2.46
ARPC1B-221ENST00000493403 SYNJ2O15056 1496 aa30.37■■■□□ 2.45
ARPC1B-221ENST00000493403 CUX1P39880 1505 aa30.33■■■□□ 2.45
ARPC1B-221ENST00000493403 GAPVD1Q14C86 1478 aa30.23■■■□□ 2.43
ARPC1B-221ENST00000493403 PBRM1Q86U86 1689 aa30.2■■■□□ 2.42
ARPC1B-221ENST00000493403 ABCA10Q8WWZ4 1543 aa30.16■■■□□ 2.42
ARPC1B-221ENST00000493403 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
ARPC1B-221ENST00000493403 AEBP2Q6ZN18 517 aaPredicted RBP30.05■■■□□ 2.4
ARPC1B-221ENST00000493403 GRIN2AQ12879 1464 aa29.99■■■□□ 2.39
ARPC1B-221ENST00000493403 WRNQ14191 1432 aaPredicted RBP eCLIP29.98■■■□□ 2.39
ARPC1B-221ENST00000493403 NUP160Q12769 1436 aa29.93■■■□□ 2.38
ARPC1B-221ENST00000493403 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
ARPC1B-221ENST00000493403 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
ARPC1B-221ENST00000493403 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
ARPC1B-221ENST00000493403 SHROOM2Q13796 1616 aa29.83■■■□□ 2.37
ARPC1B-221ENST00000493403 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
ARPC1B-221ENST00000493403 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
ARPC1B-221ENST00000493403 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
ARPC1B-221ENST00000493403 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
ARPC1B-221ENST00000493403 SUPT5HO00267 1087 aaKnown RBP29.66■■■□□ 2.34
ARPC1B-221ENST00000493403 PRG4Q92954 1404 aaPredicted RBP29.62■■■□□ 2.33
ARPC1B-221ENST00000493403 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
ARPC1B-221ENST00000493403 KIF13AQ9H1H9 1805 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms