RNA–Protein interactions for RNA: ENST00000493396.1

C3orf58-206, Transcript of chromosome 3 open reading frame 58, humanhuman

TSL 3

Gene C3orf58, Length 536 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58-206ENST00000493396 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
C3orf58-206ENST00000493396 CCDC180Q9P1Z9 1646 aa34.03■■■■□ 3.04
C3orf58-206ENST00000493396 ABCC9O60706 1549 aa33.4■■■□□ 2.94
C3orf58-206ENST00000493396 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
C3orf58-206ENST00000493396 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
C3orf58-206ENST00000493396 NACADO15069 1562 aa32.01■■■□□ 2.71
C3orf58-206ENST00000493396 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
C3orf58-206ENST00000493396 MYO15BQ96JP2 1530 aa31.77■■■□□ 2.68
C3orf58-206ENST00000493396 DCAF1Q9Y4B6 1507 aa31.62■■■□□ 2.65
C3orf58-206ENST00000493396 UNC13AQ9UPW8 1703 aa31.34■■■□□ 2.61
C3orf58-206ENST00000493396 PABPN1Q86U42 306 aaKnown RBP eCLIP31.21■■■□□ 2.59
C3orf58-206ENST00000493396 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
C3orf58-206ENST00000493396 SCRIBQ14160 1630 aa31.09■■■□□ 2.57
C3orf58-206ENST00000493396 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
C3orf58-206ENST00000493396 DNAJC5BQ9UF47 199 aa30.69■■■□□ 2.5
C3orf58-206ENST00000493396 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
C3orf58-206ENST00000493396 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
C3orf58-206ENST00000493396 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
C3orf58-206ENST00000493396 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
C3orf58-206ENST00000493396 BAZ1AQ9NRL2 1556 aaPredicted RBP29.66■■■□□ 2.34
C3orf58-206ENST00000493396 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
C3orf58-206ENST00000493396 NCAPD3P42695 1498 aa29.54■■■□□ 2.32
C3orf58-206ENST00000493396 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
C3orf58-206ENST00000493396 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.31
C3orf58-206ENST00000493396 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.29
C3orf58-206ENST00000493396 HMGXB3Q12766 1538 aa29.38■■■□□ 2.29
C3orf58-206ENST00000493396 BAZ1BQ9UIG0 1483 aaKnown RBP29.32■■■□□ 2.28
C3orf58-206ENST00000493396 WIZO95785 1651 aa29.19■■■□□ 2.26
C3orf58-206ENST00000493396 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
C3orf58-206ENST00000493396 NESP48681 1621 aa28.88■■■□□ 2.21
C3orf58-206ENST00000493396 TOP2AP11388 1531 aaKnown RBP28.86■■■□□ 2.21
C3orf58-206ENST00000493396 ERCC6Q03468 1493 aa28.79■■■□□ 2.2
C3orf58-206ENST00000493396 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
C3orf58-206ENST00000493396 CADPSQ9ULU8 1353 aa28.68■■■□□ 2.18
C3orf58-206ENST00000493396 PDS5BQ9NTI5 1447 aa28.59■■■□□ 2.17
C3orf58-206ENST00000493396 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
C3orf58-206ENST00000493396 KIF21AQ7Z4S6 1674 aa28.53■■■□□ 2.16
C3orf58-206ENST00000493396 CFTRP13569 1480 aa28.49■■■□□ 2.15
C3orf58-206ENST00000493396 CUX2O14529 1486 aa28.47■■■□□ 2.15
C3orf58-206ENST00000493396 THOC2Q8NI27 1593 aaKnown RBP28.44■■■□□ 2.14
C3orf58-206ENST00000493396 SUPT5HO00267 1087 aaKnown RBP28.41■■■□□ 2.14
C3orf58-206ENST00000493396 FANCD2Q9BXW9 1451 aa28.37■■■□□ 2.13
C3orf58-206ENST00000493396 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
C3orf58-206ENST00000493396 MRC2Q9UBG0 1479 aa28.31■■■□□ 2.12
C3orf58-206ENST00000493396 PRDM2Q13029 1718 aa28.27■■■□□ 2.12
C3orf58-206ENST00000493396 WDR62O43379 1518 aa28.2■■■□□ 2.1
C3orf58-206ENST00000493396 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
C3orf58-206ENST00000493396 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
C3orf58-206ENST00000493396 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
C3orf58-206ENST00000493396 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
C3orf58-206ENST00000493396 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
C3orf58-206ENST00000493396 CUX1P39880 1505 aa27.68■■■□□ 2.02
C3orf58-206ENST00000493396 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
C3orf58-206ENST00000493396 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
C3orf58-206ENST00000493396 ZNF608Q9ULD9 1512 aaPredicted RBP27.63■■■□□ 2.01
C3orf58-206ENST00000493396 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
C3orf58-206ENST00000493396 TARBP1Q13395 1621 aaKnown RBP27.59■■■□□ 2.01
C3orf58-206ENST00000493396 SOGA1O94964 1423 aa27.57■■■□□ 2
C3orf58-206ENST00000493396 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
C3orf58-206ENST00000493396 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
C3orf58-206ENST00000493396 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.99
C3orf58-206ENST00000493396 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
C3orf58-206ENST00000493396 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
C3orf58-206ENST00000493396 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
C3orf58-206ENST00000493396 TOP2BQ02880 1626 aa27.41■■□□□ 1.98
C3orf58-206ENST00000493396 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
C3orf58-206ENST00000493396 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
C3orf58-206ENST00000493396 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
C3orf58-206ENST00000493396 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
C3orf58-206ENST00000493396 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
C3orf58-206ENST00000493396 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
C3orf58-206ENST00000493396 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
C3orf58-206ENST00000493396 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
C3orf58-206ENST00000493396 FBLN2P98095 1184 aa27.19■■□□□ 1.94
C3orf58-206ENST00000493396 CHD1O14646 1710 aa27.19■■□□□ 1.94
C3orf58-206ENST00000493396 PBRM1Q86U86 1689 aa27.18■■□□□ 1.94
C3orf58-206ENST00000493396 MAGI1Q96QZ7 1491 aaPredicted RBP27.16■■□□□ 1.94
C3orf58-206ENST00000493396 CHMP7Q8WUX9 453 aaPredicted RBP27.08■■□□□ 1.93
C3orf58-206ENST00000493396 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
C3orf58-206ENST00000493396 ERICH3Q5RHP9 1530 aa26.98■■□□□ 1.91
C3orf58-206ENST00000493396 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
C3orf58-206ENST00000493396 FHAD1B1AJZ9 1412 aa26.91■■□□□ 1.9
C3orf58-206ENST00000493396 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
C3orf58-206ENST00000493396 GRIN2AQ12879 1464 aa26.88■■□□□ 1.89
C3orf58-206ENST00000493396 RIMBP3CA6NJZ7 1639 aa26.87■■□□□ 1.89
C3orf58-206ENST00000493396 RIMBP3BA6NNM3 1639 aa26.87■■□□□ 1.89
C3orf58-206ENST00000493396 RIMBP3Q9UFD9 1639 aa26.87■■□□□ 1.89
C3orf58-206ENST00000493396 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
C3orf58-206ENST00000493396 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
C3orf58-206ENST00000493396 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
C3orf58-206ENST00000493396 IGF1RP08069 1367 aa26.8■■□□□ 1.88
C3orf58-206ENST00000493396 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
C3orf58-206ENST00000493396 NUP160Q12769 1436 aa26.75■■□□□ 1.87
C3orf58-206ENST00000493396 CUL7Q14999 1698 aa26.74■■□□□ 1.87
C3orf58-206ENST00000493396 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
C3orf58-206ENST00000493396 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
C3orf58-206ENST00000493396 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
C3orf58-206ENST00000493396 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.86
C3orf58-206ENST00000493396 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
C3orf58-206ENST00000493396 ERCC6L2Q5T890 1561 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms