RNA–Protein interactions for RNA: ENST00000493312.6

CSF2RA-216, Transcript of colony stimulating factor 2 receptor alpha subunit, humanhuman

TSL 5

Gene CSF2RA, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF2RA-216ENST00000493312 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
CSF2RA-216ENST00000493312 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
CSF2RA-216ENST00000493312 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
CSF2RA-216ENST00000493312 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
CSF2RA-216ENST00000493312 ABCC9O60706 1549 aa15.33■□□□□ 0.04
CSF2RA-216ENST00000493312 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
CSF2RA-216ENST00000493312 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
CSF2RA-216ENST00000493312 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
CSF2RA-216ENST00000493312 NACADO15069 1562 aa14.72□□□□□ -0.05
CSF2RA-216ENST00000493312 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
CSF2RA-216ENST00000493312 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
CSF2RA-216ENST00000493312 MYO15BQ96JP2 1530 aa14.59□□□□□ -0.07
CSF2RA-216ENST00000493312 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
CSF2RA-216ENST00000493312 UNC13AQ9UPW8 1703 aa14.39□□□□□ -0.11
CSF2RA-216ENST00000493312 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
CSF2RA-216ENST00000493312 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
CSF2RA-216ENST00000493312 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
CSF2RA-216ENST00000493312 SHROOM4Q9ULL8 1493 aa14.14□□□□□ -0.15
CSF2RA-216ENST00000493312 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
CSF2RA-216ENST00000493312 FOXD1Q16676 465 aa13.95□□□□□ -0.18
CSF2RA-216ENST00000493312 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
CSF2RA-216ENST00000493312 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
CSF2RA-216ENST00000493312 CECR2Q9BXF3 1484 aa13.78□□□□□ -0.2
CSF2RA-216ENST00000493312 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
CSF2RA-216ENST00000493312 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
CSF2RA-216ENST00000493312 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
CSF2RA-216ENST00000493312 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
CSF2RA-216ENST00000493312 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
CSF2RA-216ENST00000493312 NCAPD3P42695 1498 aa13.54□□□□□ -0.24
CSF2RA-216ENST00000493312 MROH2BQ7Z745 1585 aa13.52□□□□□ -0.25
CSF2RA-216ENST00000493312 HMGXB3Q12766 1538 aa13.5□□□□□ -0.25
CSF2RA-216ENST00000493312 BAZ1BQ9UIG0 1483 aaKnown RBP13.49□□□□□ -0.25
CSF2RA-216ENST00000493312 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
CSF2RA-216ENST00000493312 WIZO95785 1651 aa13.4□□□□□ -0.26
CSF2RA-216ENST00000493312 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
CSF2RA-216ENST00000493312 MSH5O43196 834 aa13.35□□□□□ -0.27
CSF2RA-216ENST00000493312 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
CSF2RA-216ENST00000493312 TOP2AP11388 1531 aaKnown RBP13.26□□□□□ -0.29
CSF2RA-216ENST00000493312 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
CSF2RA-216ENST00000493312 NESP48681 1621 aa13.22□□□□□ -0.29
CSF2RA-216ENST00000493312 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
CSF2RA-216ENST00000493312 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
CSF2RA-216ENST00000493312 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
CSF2RA-216ENST00000493312 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
CSF2RA-216ENST00000493312 CUX2O14529 1486 aa13.09□□□□□ -0.31
CSF2RA-216ENST00000493312 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
CSF2RA-216ENST00000493312 CFTRP13569 1480 aa13.08□□□□□ -0.32
CSF2RA-216ENST00000493312 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
CSF2RA-216ENST00000493312 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
CSF2RA-216ENST00000493312 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
CSF2RA-216ENST00000493312 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
CSF2RA-216ENST00000493312 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
CSF2RA-216ENST00000493312 WDR62O43379 1518 aa12.94□□□□□ -0.34
CSF2RA-216ENST00000493312 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
CSF2RA-216ENST00000493312 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
CSF2RA-216ENST00000493312 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
CSF2RA-216ENST00000493312 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
CSF2RA-216ENST00000493312 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
CSF2RA-216ENST00000493312 IFT140Q96RY7 1462 aa12.76□□□□□ -0.37
CSF2RA-216ENST00000493312 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
CSF2RA-216ENST00000493312 POLA1P09884 1462 aaPredicted RBP12.7□□□□□ -0.38
CSF2RA-216ENST00000493312 CUX1P39880 1505 aa12.69□□□□□ -0.38
CSF2RA-216ENST00000493312 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
CSF2RA-216ENST00000493312 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
CSF2RA-216ENST00000493312 SOGA1O94964 1423 aa12.66□□□□□ -0.38
CSF2RA-216ENST00000493312 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
CSF2RA-216ENST00000493312 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
CSF2RA-216ENST00000493312 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
CSF2RA-216ENST00000493312 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
CSF2RA-216ENST00000493312 WRNQ14191 1432 aaPredicted RBP eCLIP12.64□□□□□ -0.39
CSF2RA-216ENST00000493312 ADRA2BP18089 450 aa12.63□□□□□ -0.39
CSF2RA-216ENST00000493312 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
CSF2RA-216ENST00000493312 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
CSF2RA-216ENST00000493312 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSF2RA-216ENST00000493312 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
CSF2RA-216ENST00000493312 BIVM-ERCC5R4GMW8 1640 aa12.6□□□□□ -0.39
CSF2RA-216ENST00000493312 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
CSF2RA-216ENST00000493312 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
CSF2RA-216ENST00000493312 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
CSF2RA-216ENST00000493312 ABCA10Q8WWZ4 1543 aa12.54□□□□□ -0.4
CSF2RA-216ENST00000493312 FBLN2P98095 1184 aa12.54□□□□□ -0.4
CSF2RA-216ENST00000493312 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
CSF2RA-216ENST00000493312 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
CSF2RA-216ENST00000493312 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
CSF2RA-216ENST00000493312 CHD1O14646 1710 aa12.51□□□□□ -0.41
CSF2RA-216ENST00000493312 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
CSF2RA-216ENST00000493312 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
CSF2RA-216ENST00000493312 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
CSF2RA-216ENST00000493312 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
CSF2RA-216ENST00000493312 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
CSF2RA-216ENST00000493312 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
CSF2RA-216ENST00000493312 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
CSF2RA-216ENST00000493312 ADAMTS12P58397 1594 aa12.39□□□□□ -0.43
CSF2RA-216ENST00000493312 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
CSF2RA-216ENST00000493312 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
CSF2RA-216ENST00000493312 GRIN2AQ12879 1464 aa12.35□□□□□ -0.43
CSF2RA-216ENST00000493312 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.43
CSF2RA-216ENST00000493312 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.43
CSF2RA-216ENST00000493312 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.43
CSF2RA-216ENST00000493312 CUL7Q14999 1698 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms