RNA–Protein interactions for RNA: ENST00000493282.5

TDGF1-204, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

TSL 2

Gene TDGF1, Length 643 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-204ENST00000493282 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
TDGF1-204ENST00000493282 CCDC180Q9P1Z9 1646 aa30.82■■■□□ 2.52
TDGF1-204ENST00000493282 ABCC9O60706 1549 aa30.14■■■□□ 2.42
TDGF1-204ENST00000493282 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
TDGF1-204ENST00000493282 DCAF8L2P0C7V8 631 aa29.02■■■□□ 2.24
TDGF1-204ENST00000493282 NACADO15069 1562 aa28.99■■■□□ 2.23
TDGF1-204ENST00000493282 MYO15BQ96JP2 1530 aa28.76■■■□□ 2.19
TDGF1-204ENST00000493282 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
TDGF1-204ENST00000493282 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
TDGF1-204ENST00000493282 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
TDGF1-204ENST00000493282 PABPN1Q86U42 306 aaKnown RBP eCLIP28.14■■■□□ 2.1
TDGF1-204ENST00000493282 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
TDGF1-204ENST00000493282 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
TDGF1-204ENST00000493282 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
TDGF1-204ENST00000493282 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
TDGF1-204ENST00000493282 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
TDGF1-204ENST00000493282 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
TDGF1-204ENST00000493282 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
TDGF1-204ENST00000493282 BAZ1AQ9NRL2 1556 aaPredicted RBP26.85■■□□□ 1.89
TDGF1-204ENST00000493282 SMARCA4P51532 1647 aa26.83■■□□□ 1.88
TDGF1-204ENST00000493282 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
TDGF1-204ENST00000493282 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
TDGF1-204ENST00000493282 ATAD2BQ9ULI0 1458 aa26.67■■□□□ 1.86
TDGF1-204ENST00000493282 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
TDGF1-204ENST00000493282 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
TDGF1-204ENST00000493282 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
TDGF1-204ENST00000493282 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
TDGF1-204ENST00000493282 WIZO95785 1651 aa26.3■■□□□ 1.8
TDGF1-204ENST00000493282 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
TDGF1-204ENST00000493282 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
TDGF1-204ENST00000493282 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
TDGF1-204ENST00000493282 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
TDGF1-204ENST00000493282 NESP48681 1621 aa25.99■■□□□ 1.75
TDGF1-204ENST00000493282 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
TDGF1-204ENST00000493282 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
TDGF1-204ENST00000493282 CUX2O14529 1486 aa25.82■■□□□ 1.72
TDGF1-204ENST00000493282 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
TDGF1-204ENST00000493282 CFTRP13569 1480 aa25.73■■□□□ 1.71
TDGF1-204ENST00000493282 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
TDGF1-204ENST00000493282 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
TDGF1-204ENST00000493282 THOC2Q8NI27 1593 aaKnown RBP25.65■■□□□ 1.7
TDGF1-204ENST00000493282 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
TDGF1-204ENST00000493282 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
TDGF1-204ENST00000493282 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
TDGF1-204ENST00000493282 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
TDGF1-204ENST00000493282 WDR62O43379 1518 aa25.48■■□□□ 1.67
TDGF1-204ENST00000493282 ABCC8Q09428 1581 aa25.33■■□□□ 1.65
TDGF1-204ENST00000493282 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
TDGF1-204ENST00000493282 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
TDGF1-204ENST00000493282 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
TDGF1-204ENST00000493282 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
TDGF1-204ENST00000493282 DNAJC5Q9H3Z4 198 aa25.05■■□□□ 1.6
TDGF1-204ENST00000493282 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
TDGF1-204ENST00000493282 CUX1P39880 1505 aa24.93■■□□□ 1.58
TDGF1-204ENST00000493282 SOGA1O94964 1423 aa24.92■■□□□ 1.58
TDGF1-204ENST00000493282 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
TDGF1-204ENST00000493282 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
TDGF1-204ENST00000493282 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
TDGF1-204ENST00000493282 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
TDGF1-204ENST00000493282 WRNQ14191 1432 aaPredicted RBP eCLIP24.84■■□□□ 1.57
TDGF1-204ENST00000493282 WDR97A6NE52 1622 aa24.83■■□□□ 1.57
TDGF1-204ENST00000493282 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
TDGF1-204ENST00000493282 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
TDGF1-204ENST00000493282 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
TDGF1-204ENST00000493282 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
TDGF1-204ENST00000493282 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
TDGF1-204ENST00000493282 TDRD9Q8NDG6 1382 aaKnown RBP24.74■■□□□ 1.55
TDGF1-204ENST00000493282 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
TDGF1-204ENST00000493282 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
TDGF1-204ENST00000493282 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
TDGF1-204ENST00000493282 FBLN2P98095 1184 aa24.64■■□□□ 1.54
TDGF1-204ENST00000493282 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
TDGF1-204ENST00000493282 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
TDGF1-204ENST00000493282 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
TDGF1-204ENST00000493282 CHD1O14646 1710 aa24.58■■□□□ 1.52
TDGF1-204ENST00000493282 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
TDGF1-204ENST00000493282 CHMP7Q8WUX9 453 aaPredicted RBP24.57■■□□□ 1.52
TDGF1-204ENST00000493282 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
TDGF1-204ENST00000493282 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
TDGF1-204ENST00000493282 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
TDGF1-204ENST00000493282 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
TDGF1-204ENST00000493282 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
TDGF1-204ENST00000493282 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
TDGF1-204ENST00000493282 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
TDGF1-204ENST00000493282 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
TDGF1-204ENST00000493282 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
TDGF1-204ENST00000493282 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
TDGF1-204ENST00000493282 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
TDGF1-204ENST00000493282 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
TDGF1-204ENST00000493282 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
TDGF1-204ENST00000493282 CUL7Q14999 1698 aa24.24■■□□□ 1.47
TDGF1-204ENST00000493282 IGF1RP08069 1367 aa24.16■■□□□ 1.46
TDGF1-204ENST00000493282 NUP160Q12769 1436 aa24.15■■□□□ 1.46
TDGF1-204ENST00000493282 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
TDGF1-204ENST00000493282 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
TDGF1-204ENST00000493282 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
TDGF1-204ENST00000493282 ARAP1Q96P48 1450 aa24.02■■□□□ 1.44
TDGF1-204ENST00000493282 RUSC2Q8N2Y8 1516 aa23.99■■□□□ 1.43
TDGF1-204ENST00000493282 SHROOM2Q13796 1616 aa23.99■■□□□ 1.43
TDGF1-204ENST00000493282 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms