RNA–Protein interactions for RNA: ENST00000493270.1

GAD1-215, Transcript of glutamate decarboxylase 1, humanhuman

TSL 3

Gene GAD1, Length 807 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAD1-215ENST00000493270 NISCHQ9Y2I1 1504 aa25.22■■□□□ 1.63
GAD1-215ENST00000493270 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
GAD1-215ENST00000493270 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.98
GAD1-215ENST00000493270 ABCC9O60706 1549 aa21.08■□□□□ 0.96
GAD1-215ENST00000493270 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
GAD1-215ENST00000493270 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
GAD1-215ENST00000493270 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
GAD1-215ENST00000493270 NACADO15069 1562 aa20.66■□□□□ 0.9
GAD1-215ENST00000493270 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
GAD1-215ENST00000493270 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
GAD1-215ENST00000493270 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
GAD1-215ENST00000493270 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
GAD1-215ENST00000493270 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
GAD1-215ENST00000493270 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
GAD1-215ENST00000493270 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
GAD1-215ENST00000493270 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
GAD1-215ENST00000493270 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
GAD1-215ENST00000493270 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
GAD1-215ENST00000493270 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
GAD1-215ENST00000493270 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
GAD1-215ENST00000493270 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
GAD1-215ENST00000493270 WIZO95785 1651 aa19.27■□□□□ 0.67
GAD1-215ENST00000493270 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
GAD1-215ENST00000493270 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
GAD1-215ENST00000493270 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
GAD1-215ENST00000493270 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
GAD1-215ENST00000493270 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
GAD1-215ENST00000493270 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
GAD1-215ENST00000493270 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
GAD1-215ENST00000493270 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.63
GAD1-215ENST00000493270 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
GAD1-215ENST00000493270 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
GAD1-215ENST00000493270 CFTRP13569 1480 aa18.58■□□□□ 0.56
GAD1-215ENST00000493270 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
GAD1-215ENST00000493270 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
GAD1-215ENST00000493270 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
GAD1-215ENST00000493270 NESP48681 1621 aa18.45■□□□□ 0.54
GAD1-215ENST00000493270 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
GAD1-215ENST00000493270 ABCC8Q09428 1581 aa18.35■□□□□ 0.53
GAD1-215ENST00000493270 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
GAD1-215ENST00000493270 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
GAD1-215ENST00000493270 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
GAD1-215ENST00000493270 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
GAD1-215ENST00000493270 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
GAD1-215ENST00000493270 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
GAD1-215ENST00000493270 CUX1P39880 1505 aa18.22■□□□□ 0.51
GAD1-215ENST00000493270 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
GAD1-215ENST00000493270 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
GAD1-215ENST00000493270 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
GAD1-215ENST00000493270 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
GAD1-215ENST00000493270 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
GAD1-215ENST00000493270 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
GAD1-215ENST00000493270 MRC2Q9UBG0 1479 aa18.09■□□□□ 0.49
GAD1-215ENST00000493270 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
GAD1-215ENST00000493270 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
GAD1-215ENST00000493270 WDR62O43379 1518 aa18.04■□□□□ 0.48
GAD1-215ENST00000493270 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
GAD1-215ENST00000493270 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
GAD1-215ENST00000493270 SOGA1O94964 1423 aa17.96■□□□□ 0.47
GAD1-215ENST00000493270 CUX2O14529 1486 aa17.92■□□□□ 0.46
GAD1-215ENST00000493270 RAD54L2Q9Y4B4 1467 aa17.92■□□□□ 0.46
GAD1-215ENST00000493270 RUSC2Q8N2Y8 1516 aa17.92■□□□□ 0.46
GAD1-215ENST00000493270 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
GAD1-215ENST00000493270 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
GAD1-215ENST00000493270 EEA1Q15075 1411 aa17.89■□□□□ 0.45
GAD1-215ENST00000493270 WDR97A6NE52 1622 aa17.88■□□□□ 0.45
GAD1-215ENST00000493270 KIF27Q86VH2 1401 aa17.83■□□□□ 0.45
GAD1-215ENST00000493270 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
GAD1-215ENST00000493270 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
GAD1-215ENST00000493270 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
GAD1-215ENST00000493270 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
GAD1-215ENST00000493270 TDRD9Q8NDG6 1382 aaKnown RBP17.74■□□□□ 0.43
GAD1-215ENST00000493270 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
GAD1-215ENST00000493270 IGF1RP08069 1367 aa17.73■□□□□ 0.43
GAD1-215ENST00000493270 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
GAD1-215ENST00000493270 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
GAD1-215ENST00000493270 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
GAD1-215ENST00000493270 KIF21BO75037 1637 aa17.69■□□□□ 0.42
GAD1-215ENST00000493270 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
GAD1-215ENST00000493270 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
GAD1-215ENST00000493270 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
GAD1-215ENST00000493270 PBRM1Q86U86 1689 aa17.64■□□□□ 0.42
GAD1-215ENST00000493270 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
GAD1-215ENST00000493270 CUL7Q14999 1698 aa17.62■□□□□ 0.41
GAD1-215ENST00000493270 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
GAD1-215ENST00000493270 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
GAD1-215ENST00000493270 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
GAD1-215ENST00000493270 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
GAD1-215ENST00000493270 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
GAD1-215ENST00000493270 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
GAD1-215ENST00000493270 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
GAD1-215ENST00000493270 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
GAD1-215ENST00000493270 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
GAD1-215ENST00000493270 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
GAD1-215ENST00000493270 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
GAD1-215ENST00000493270 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
GAD1-215ENST00000493270 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
GAD1-215ENST00000493270 CTTNBP2Q8WZ74 1663 aa17.36■□□□□ 0.37
GAD1-215ENST00000493270 NUP160Q12769 1436 aa17.34■□□□□ 0.37
GAD1-215ENST00000493270 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms