RNA–Protein interactions for RNA: ENST00000493228.1

PCBD1-202, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

TSL 2

Gene PCBD1, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-202ENST00000493228 NISCHQ9Y2I1 1504 aa38.39■■■■□ 3.74
PCBD1-202ENST00000493228 ABCC9O60706 1549 aa35.38■■■■□ 3.25
PCBD1-202ENST00000493228 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
PCBD1-202ENST00000493228 DNAJC5BQ9UF47 199 aa33.74■■■□□ 2.99
PCBD1-202ENST00000493228 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
PCBD1-202ENST00000493228 NACADO15069 1562 aa32.93■■■□□ 2.86
PCBD1-202ENST00000493228 PABPN1Q86U42 306 aaKnown RBP eCLIP32.88■■■□□ 2.85
PCBD1-202ENST00000493228 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
PCBD1-202ENST00000493228 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
PCBD1-202ENST00000493228 BICRAQ9NZM4 1560 aa32.4■■■□□ 2.78
PCBD1-202ENST00000493228 MYO15BQ96JP2 1530 aa32.21■■■□□ 2.75
PCBD1-202ENST00000493228 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
PCBD1-202ENST00000493228 CC2D2AQ9P2K1 1620 aa31.89■■■□□ 2.7
PCBD1-202ENST00000493228 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
PCBD1-202ENST00000493228 ZCCHC6Q5VYS8 1495 aaKnown RBP31.67■■■□□ 2.66
PCBD1-202ENST00000493228 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
PCBD1-202ENST00000493228 EIF4G1Q04637 1599 aaKnown RBP31.65■■■□□ 2.66
PCBD1-202ENST00000493228 DCAF1Q9Y4B6 1507 aa31.59■■■□□ 2.65
PCBD1-202ENST00000493228 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
PCBD1-202ENST00000493228 CUX2O14529 1486 aa30.64■■■□□ 2.5
PCBD1-202ENST00000493228 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
PCBD1-202ENST00000493228 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
PCBD1-202ENST00000493228 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.44
PCBD1-202ENST00000493228 NESP48681 1621 aa30.22■■■□□ 2.43
PCBD1-202ENST00000493228 SMARCA2P51531 1590 aa30.13■■■□□ 2.41
PCBD1-202ENST00000493228 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
PCBD1-202ENST00000493228 SMARCA4P51532 1647 aa30.1■■■□□ 2.41
PCBD1-202ENST00000493228 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
PCBD1-202ENST00000493228 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
PCBD1-202ENST00000493228 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
PCBD1-202ENST00000493228 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
PCBD1-202ENST00000493228 LAMC3Q9Y6N6 1575 aa29.83■■■□□ 2.37
PCBD1-202ENST00000493228 KIF21AQ7Z4S6 1674 aa29.8■■■□□ 2.36
PCBD1-202ENST00000493228 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
PCBD1-202ENST00000493228 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
PCBD1-202ENST00000493228 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
PCBD1-202ENST00000493228 CADPSQ9ULU8 1353 aa29.49■■■□□ 2.31
PCBD1-202ENST00000493228 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
PCBD1-202ENST00000493228 WDR62O43379 1518 aa29.41■■■□□ 2.3
PCBD1-202ENST00000493228 WIZO95785 1651 aa29.26■■■□□ 2.27
PCBD1-202ENST00000493228 CEP164Q9UPV0 1460 aa29.26■■■□□ 2.27
PCBD1-202ENST00000493228 OSCARQ8IYS5 282 aa29.22■■■□□ 2.27
PCBD1-202ENST00000493228 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
PCBD1-202ENST00000493228 CFTRP13569 1480 aa29.01■■■□□ 2.23
PCBD1-202ENST00000493228 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
PCBD1-202ENST00000493228 RIMBP3CA6NJZ7 1639 aa28.9■■■□□ 2.22
PCBD1-202ENST00000493228 RIMBP3BA6NNM3 1639 aa28.9■■■□□ 2.22
PCBD1-202ENST00000493228 RIMBP3Q9UFD9 1639 aa28.9■■■□□ 2.22
PCBD1-202ENST00000493228 TOP2AP11388 1531 aaKnown RBP28.79■■■□□ 2.2
PCBD1-202ENST00000493228 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
PCBD1-202ENST00000493228 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
PCBD1-202ENST00000493228 ARHGEF11O15085 1522 aa28.72■■■□□ 2.19
PCBD1-202ENST00000493228 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
PCBD1-202ENST00000493228 IFT140Q96RY7 1462 aa28.67■■■□□ 2.18
PCBD1-202ENST00000493228 CYB5RLQ6IPT4 315 aa28.62■■■□□ 2.17
PCBD1-202ENST00000493228 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
PCBD1-202ENST00000493228 TRHP20396 242 aaPredicted RBP28.54■■■□□ 2.16
PCBD1-202ENST00000493228 EIF4G3O43432 1585 aaKnown RBP28.53■■■□□ 2.16
PCBD1-202ENST00000493228 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
PCBD1-202ENST00000493228 CHD1O14646 1710 aa28.47■■■□□ 2.15
PCBD1-202ENST00000493228 FBLN2P98095 1184 aa28.42■■■□□ 2.14
PCBD1-202ENST00000493228 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.14
PCBD1-202ENST00000493228 ARAP1Q96P48 1450 aa28.41■■■□□ 2.14
PCBD1-202ENST00000493228 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
PCBD1-202ENST00000493228 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
PCBD1-202ENST00000493228 TARBP1Q13395 1621 aaKnown RBP28.33■■■□□ 2.13
PCBD1-202ENST00000493228 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
PCBD1-202ENST00000493228 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
PCBD1-202ENST00000493228 TDRD9Q8NDG6 1382 aaKnown RBP28.16■■■□□ 2.1
PCBD1-202ENST00000493228 AEBP2Q6ZN18 517 aaPredicted RBP28.14■■■□□ 2.1
PCBD1-202ENST00000493228 SOGA1O94964 1423 aa28.1■■■□□ 2.09
PCBD1-202ENST00000493228 SNAPC4Q5SXM2 1469 aa28.09■■■□□ 2.09
PCBD1-202ENST00000493228 CHMP7Q8WUX9 453 aaPredicted RBP28.06■■■□□ 2.08
PCBD1-202ENST00000493228 CLASP1Q7Z460 1538 aa28.06■■■□□ 2.08
PCBD1-202ENST00000493228 SYNJ1O43426 1573 aa28.01■■■□□ 2.07
PCBD1-202ENST00000493228 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
PCBD1-202ENST00000493228 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
PCBD1-202ENST00000493228 WDR97A6NE52 1622 aa27.93■■■□□ 2.06
PCBD1-202ENST00000493228 GRIN2BQ13224 1484 aa27.9■■■□□ 2.06
PCBD1-202ENST00000493228 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
PCBD1-202ENST00000493228 CUX1P39880 1505 aa27.85■■■□□ 2.05
PCBD1-202ENST00000493228 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
PCBD1-202ENST00000493228 PBRM1Q86U86 1689 aa27.78■■■□□ 2.04
PCBD1-202ENST00000493228 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
PCBD1-202ENST00000493228 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
PCBD1-202ENST00000493228 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
PCBD1-202ENST00000493228 GRIN2AQ12879 1464 aa27.54■■■□□ 2
PCBD1-202ENST00000493228 CEP170Q5SW79 1584 aa27.52■■■□□ 2
PCBD1-202ENST00000493228 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
PCBD1-202ENST00000493228 NUP160Q12769 1436 aa27.45■■□□□ 1.98
PCBD1-202ENST00000493228 KIF13AQ9H1H9 1805 aa27.42■■□□□ 1.98
PCBD1-202ENST00000493228 SHROOM2Q13796 1616 aa27.4■■□□□ 1.98
PCBD1-202ENST00000493228 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
PCBD1-202ENST00000493228 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
PCBD1-202ENST00000493228 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
PCBD1-202ENST00000493228 FAM69CQ0P6D2 419 aa27.25■■□□□ 1.95
PCBD1-202ENST00000493228 JPH4Q96JJ6 628 aa27.24■■□□□ 1.95
PCBD1-202ENST00000493228 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
PCBD1-202ENST00000493228 ERICH3Q5RHP9 1530 aa27.22■■□□□ 1.95
PCBD1-202ENST00000493228 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms