RNA–Protein interactions for RNA: ENST00000493224.5

RPS27-204, Transcript of ribosomal protein S27, humanhuman

TSL 2

Gene RPS27, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27-204ENST00000493224 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
RPS27-204ENST00000493224 CCDC180Q9P1Z9 1646 aa38.33■■■■□ 3.73
RPS27-204ENST00000493224 ABCC9O60706 1549 aa38.22■■■■□ 3.71
RPS27-204ENST00000493224 RB1CC1Q8TDY2 1594 aa36.41■■■■□ 3.42
RPS27-204ENST00000493224 NACADO15069 1562 aa36.19■■■■□ 3.38
RPS27-204ENST00000493224 DCAF8L2P0C7V8 631 aa36.08■■■■□ 3.37
RPS27-204ENST00000493224 MYO15BQ96JP2 1530 aa35.73■■■■□ 3.31
RPS27-204ENST00000493224 DNAJC5BQ9UF47 199 aa35.73■■■■□ 3.31
RPS27-204ENST00000493224 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
RPS27-204ENST00000493224 PABPN1Q86U42 306 aaKnown RBP eCLIP35.61■■■■□ 3.29
RPS27-204ENST00000493224 ZCCHC6Q5VYS8 1495 aaKnown RBP35.49■■■■□ 3.27
RPS27-204ENST00000493224 BICRAQ9NZM4 1560 aa35.37■■■■□ 3.25
RPS27-204ENST00000493224 DCAF1Q9Y4B6 1507 aa35.33■■■■□ 3.25
RPS27-204ENST00000493224 SCRIBQ14160 1630 aa34.96■■■■□ 3.19
RPS27-204ENST00000493224 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
RPS27-204ENST00000493224 CC2D2AQ9P2K1 1620 aa34.53■■■■□ 3.12
RPS27-204ENST00000493224 EIF4G1Q04637 1599 aaKnown RBP34.48■■■■□ 3.11
RPS27-204ENST00000493224 CECR2Q9BXF3 1484 aa34.39■■■■□ 3.1
RPS27-204ENST00000493224 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
RPS27-204ENST00000493224 SMARCA4P51532 1647 aa33.35■■■□□ 2.93
RPS27-204ENST00000493224 ATAD2BQ9ULI0 1458 aa33.35■■■□□ 2.93
RPS27-204ENST00000493224 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
RPS27-204ENST00000493224 BAZ1AQ9NRL2 1556 aaPredicted RBP33.2■■■□□ 2.91
RPS27-204ENST00000493224 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
RPS27-204ENST00000493224 BAZ1BQ9UIG0 1483 aaKnown RBP33.03■■■□□ 2.88
RPS27-204ENST00000493224 PEG3Q9GZU2 1588 aa33.02■■■□□ 2.88
RPS27-204ENST00000493224 MROH2BQ7Z745 1585 aa32.99■■■□□ 2.87
RPS27-204ENST00000493224 ERCC6Q03468 1493 aa32.97■■■□□ 2.87
RPS27-204ENST00000493224 NESP48681 1621 aa32.88■■■□□ 2.85
RPS27-204ENST00000493224 CUX2O14529 1486 aa32.85■■■□□ 2.85
RPS27-204ENST00000493224 DNAJC5Q9H3Z4 198 aa32.68■■■□□ 2.82
RPS27-204ENST00000493224 LAMC3Q9Y6N6 1575 aa32.64■■■□□ 2.82
RPS27-204ENST00000493224 WIZO95785 1651 aa32.61■■■□□ 2.81
RPS27-204ENST00000493224 THOC2Q8NI27 1593 aaKnown RBP32.5■■■□□ 2.79
RPS27-204ENST00000493224 KIF21AQ7Z4S6 1674 aa32.46■■■□□ 2.79
RPS27-204ENST00000493224 PDS5BQ9NTI5 1447 aa32.44■■■□□ 2.78
RPS27-204ENST00000493224 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
RPS27-204ENST00000493224 RSF1Q96T23 1441 aaPredicted RBP32.34■■■□□ 2.77
RPS27-204ENST00000493224 TOP2AP11388 1531 aaKnown RBP32.19■■■□□ 2.74
RPS27-204ENST00000493224 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
RPS27-204ENST00000493224 WDR62O43379 1518 aa32.09■■■□□ 2.73
RPS27-204ENST00000493224 CFTRP13569 1480 aa32.07■■■□□ 2.72
RPS27-204ENST00000493224 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
RPS27-204ENST00000493224 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
RPS27-204ENST00000493224 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
RPS27-204ENST00000493224 URB2Q14146 1524 aaKnown RBP31.79■■■□□ 2.68
RPS27-204ENST00000493224 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
RPS27-204ENST00000493224 TOPBP1Q92547 1522 aa31.47■■■□□ 2.63
RPS27-204ENST00000493224 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
RPS27-204ENST00000493224 OSCARQ8IYS5 282 aa31.39■■■□□ 2.62
RPS27-204ENST00000493224 ABCC8Q09428 1581 aa31.39■■■□□ 2.61
RPS27-204ENST00000493224 ZNF608Q9ULD9 1512 aaPredicted RBP31.38■■■□□ 2.61
RPS27-204ENST00000493224 DNMBPQ6XZF7 1577 aa31.36■■■□□ 2.61
RPS27-204ENST00000493224 TRIM41Q8WV44 630 aa31.33■■■□□ 2.61
RPS27-204ENST00000493224 EIF4G3O43432 1585 aaKnown RBP31.21■■■□□ 2.59
RPS27-204ENST00000493224 TARBP1Q13395 1621 aaKnown RBP31.17■■■□□ 2.58
RPS27-204ENST00000493224 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
RPS27-204ENST00000493224 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.573e-12■■■■■ 39.2
RPS27-204ENST00000493224 RAD54L2Q9Y4B4 1467 aa31.06■■■□□ 2.56
RPS27-204ENST00000493224 SUPT5HO00267 1087 aaKnown RBP31.05■■■□□ 2.56
RPS27-204ENST00000493224 SOGA1O94964 1423 aa31.01■■■□□ 2.55
RPS27-204ENST00000493224 FGD5Q6ZNL6 1462 aa30.98■■■□□ 2.55
RPS27-204ENST00000493224 RIMBP3CA6NJZ7 1639 aa30.98■■■□□ 2.55
RPS27-204ENST00000493224 RIMBP3BA6NNM3 1639 aa30.98■■■□□ 2.55
RPS27-204ENST00000493224 RIMBP3Q9UFD9 1639 aa30.98■■■□□ 2.55
RPS27-204ENST00000493224 CUX1P39880 1505 aa30.98■■■□□ 2.55
RPS27-204ENST00000493224 CHD1O14646 1710 aa30.96■■■□□ 2.55
RPS27-204ENST00000493224 TDRD9Q8NDG6 1382 aaKnown RBP30.94■■■□□ 2.54
RPS27-204ENST00000493224 ARHGEF11O15085 1522 aa30.88■■■□□ 2.53
RPS27-204ENST00000493224 FBLN2P98095 1184 aa30.88■■■□□ 2.53
RPS27-204ENST00000493224 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
RPS27-204ENST00000493224 SNAPC4Q5SXM2 1469 aa30.79■■■□□ 2.52
RPS27-204ENST00000493224 GRIN2BQ13224 1484 aa30.72■■■□□ 2.51
RPS27-204ENST00000493224 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.51
RPS27-204ENST00000493224 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
RPS27-204ENST00000493224 CYB5RLQ6IPT4 315 aa30.65■■■□□ 2.5
RPS27-204ENST00000493224 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
RPS27-204ENST00000493224 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
RPS27-204ENST00000493224 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
RPS27-204ENST00000493224 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
RPS27-204ENST00000493224 CLASP1Q7Z460 1538 aa30.59■■■□□ 2.49
RPS27-204ENST00000493224 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
RPS27-204ENST00000493224 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
RPS27-204ENST00000493224 ABCA5Q8WWZ7 1642 aa30.58■■■□□ 2.49
RPS27-204ENST00000493224 BIVM-ERCC5R4GMW8 1640 aa30.52■■■□□ 2.48
RPS27-204ENST00000493224 WRNQ14191 1432 aaPredicted RBP eCLIP30.52■■■□□ 2.48
RPS27-204ENST00000493224 TOP2BQ02880 1626 aa30.51■■■□□ 2.48
RPS27-204ENST00000493224 ADAMTS12P58397 1594 aa30.34■■■□□ 2.45
RPS27-204ENST00000493224 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
RPS27-204ENST00000493224 TRHP20396 242 aaPredicted RBP30.27■■■□□ 2.44
RPS27-204ENST00000493224 FHAD1B1AJZ9 1412 aa30.25■■■□□ 2.43
RPS27-204ENST00000493224 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
RPS27-204ENST00000493224 CEP170Q5SW79 1584 aa30.23■■■□□ 2.43
RPS27-204ENST00000493224 NUP160Q12769 1436 aa30.22■■■□□ 2.43
RPS27-204ENST00000493224 ERCC6L2Q5T890 1561 aa30.15■■■□□ 2.42
RPS27-204ENST00000493224 SHROOM2Q13796 1616 aa30.08■■■□□ 2.41
RPS27-204ENST00000493224 PRG4Q92954 1404 aaPredicted RBP29.93■■■□□ 2.38
RPS27-204ENST00000493224 KIF27Q86VH2 1401 aa29.92■■■□□ 2.38
RPS27-204ENST00000493224 JPH4Q96JJ6 628 aa29.92■■■□□ 2.38
RPS27-204ENST00000493224 RUSC2Q8N2Y8 1516 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms