RNA–Protein interactions for RNA: ENST00000493133.1

PBXIP1-205, Transcript of PBX homeobox interacting protein 1, humanhuman

TSL 3

Gene PBXIP1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-205ENST00000493133 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
PBXIP1-205ENST00000493133 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
PBXIP1-205ENST00000493133 ABCC9O60706 1549 aa29.55■■■□□ 2.32
PBXIP1-205ENST00000493133 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
PBXIP1-205ENST00000493133 NACADO15069 1562 aa27.86■■■□□ 2.05
PBXIP1-205ENST00000493133 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
PBXIP1-205ENST00000493133 DNAJC5BQ9UF47 199 aa27.73■■■□□ 2.03
PBXIP1-205ENST00000493133 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
PBXIP1-205ENST00000493133 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
PBXIP1-205ENST00000493133 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
PBXIP1-205ENST00000493133 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
PBXIP1-205ENST00000493133 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
PBXIP1-205ENST00000493133 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
PBXIP1-205ENST00000493133 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
PBXIP1-205ENST00000493133 SHROOM4Q9ULL8 1493 aa26.75■■□□□ 1.87
PBXIP1-205ENST00000493133 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
PBXIP1-205ENST00000493133 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
PBXIP1-205ENST00000493133 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
PBXIP1-205ENST00000493133 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
PBXIP1-205ENST00000493133 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
PBXIP1-205ENST00000493133 ATAD2BQ9ULI0 1458 aa25.71■■□□□ 1.71
PBXIP1-205ENST00000493133 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
PBXIP1-205ENST00000493133 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
PBXIP1-205ENST00000493133 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
PBXIP1-205ENST00000493133 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
PBXIP1-205ENST00000493133 NESP48681 1621 aa25.47■■□□□ 1.67
PBXIP1-205ENST00000493133 PEG3Q9GZU2 1588 aa25.46■■□□□ 1.67
PBXIP1-205ENST00000493133 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
PBXIP1-205ENST00000493133 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
PBXIP1-205ENST00000493133 CUX2O14529 1486 aa25.3■■□□□ 1.64
PBXIP1-205ENST00000493133 WIZO95785 1651 aa25.25■■□□□ 1.63
PBXIP1-205ENST00000493133 DNAJC5Q9H3Z4 198 aa25.23■■□□□ 1.63
PBXIP1-205ENST00000493133 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.62
PBXIP1-205ENST00000493133 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
PBXIP1-205ENST00000493133 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
PBXIP1-205ENST00000493133 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
PBXIP1-205ENST00000493133 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
PBXIP1-205ENST00000493133 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
PBXIP1-205ENST00000493133 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
PBXIP1-205ENST00000493133 MRC2Q9UBG0 1479 aa24.79■■□□□ 1.56
PBXIP1-205ENST00000493133 WDR62O43379 1518 aa24.77■■□□□ 1.56
PBXIP1-205ENST00000493133 CFTRP13569 1480 aa24.7■■□□□ 1.54
PBXIP1-205ENST00000493133 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
PBXIP1-205ENST00000493133 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
PBXIP1-205ENST00000493133 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
PBXIP1-205ENST00000493133 URB2Q14146 1524 aaKnown RBP24.57■■□□□ 1.52
PBXIP1-205ENST00000493133 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
PBXIP1-205ENST00000493133 ZNF608Q9ULD9 1512 aaPredicted RBP24.28■■□□□ 1.48
PBXIP1-205ENST00000493133 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
PBXIP1-205ENST00000493133 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
PBXIP1-205ENST00000493133 DNMBPQ6XZF7 1577 aa24.18■■□□□ 1.46
PBXIP1-205ENST00000493133 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
PBXIP1-205ENST00000493133 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.45
PBXIP1-205ENST00000493133 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
PBXIP1-205ENST00000493133 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
PBXIP1-205ENST00000493133 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
PBXIP1-205ENST00000493133 POLA1P09884 1462 aaPredicted RBP24.03■■□□□ 1.44
PBXIP1-205ENST00000493133 CHD1O14646 1710 aa24.03■■□□□ 1.44
PBXIP1-205ENST00000493133 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.438e-14■■■■■ 46.5
PBXIP1-205ENST00000493133 RIMBP3CA6NJZ7 1639 aa24.01■■□□□ 1.43
PBXIP1-205ENST00000493133 RIMBP3BA6NNM3 1639 aa24.01■■□□□ 1.43
PBXIP1-205ENST00000493133 RIMBP3Q9UFD9 1639 aa24.01■■□□□ 1.43
PBXIP1-205ENST00000493133 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
PBXIP1-205ENST00000493133 CUX1P39880 1505 aa23.94■■□□□ 1.42
PBXIP1-205ENST00000493133 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
PBXIP1-205ENST00000493133 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
PBXIP1-205ENST00000493133 SOGA1O94964 1423 aa23.85■■□□□ 1.41
PBXIP1-205ENST00000493133 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
PBXIP1-205ENST00000493133 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
PBXIP1-205ENST00000493133 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
PBXIP1-205ENST00000493133 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
PBXIP1-205ENST00000493133 FBLN2P98095 1184 aa23.73■■□□□ 1.39
PBXIP1-205ENST00000493133 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
PBXIP1-205ENST00000493133 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
PBXIP1-205ENST00000493133 CLASP1Q7Z460 1538 aa23.66■■□□□ 1.38
PBXIP1-205ENST00000493133 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
PBXIP1-205ENST00000493133 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
PBXIP1-205ENST00000493133 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
PBXIP1-205ENST00000493133 MAGI1Q96QZ7 1491 aaPredicted RBP23.61■■□□□ 1.37
PBXIP1-205ENST00000493133 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
PBXIP1-205ENST00000493133 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
PBXIP1-205ENST00000493133 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
PBXIP1-205ENST00000493133 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.36
PBXIP1-205ENST00000493133 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
PBXIP1-205ENST00000493133 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
PBXIP1-205ENST00000493133 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
PBXIP1-205ENST00000493133 WRNQ14191 1432 aaPredicted RBP eCLIP23.44■■□□□ 1.34
PBXIP1-205ENST00000493133 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
PBXIP1-205ENST00000493133 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
PBXIP1-205ENST00000493133 CEP170Q5SW79 1584 aa23.39■■□□□ 1.33
PBXIP1-205ENST00000493133 GRIN2AQ12879 1464 aa23.37■■□□□ 1.33
PBXIP1-205ENST00000493133 NUP160Q12769 1436 aa23.28■■□□□ 1.32
PBXIP1-205ENST00000493133 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
PBXIP1-205ENST00000493133 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
PBXIP1-205ENST00000493133 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
PBXIP1-205ENST00000493133 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
PBXIP1-205ENST00000493133 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
PBXIP1-205ENST00000493133 PRG4Q92954 1404 aaPredicted RBP23.04■■□□□ 1.28
PBXIP1-205ENST00000493133 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
PBXIP1-205ENST00000493133 IGF1RP08069 1367 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms