RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
MMP11-213ENST00000493132 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
MMP11-213ENST00000493132 ABCC9O60706 1549 aa29.93■■■□□ 2.38
MMP11-213ENST00000493132 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
MMP11-213ENST00000493132 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
MMP11-213ENST00000493132 NACADO15069 1562 aa28.62■■■□□ 2.17
MMP11-213ENST00000493132 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
MMP11-213ENST00000493132 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
MMP11-213ENST00000493132 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
MMP11-213ENST00000493132 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
MMP11-213ENST00000493132 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.06
MMP11-213ENST00000493132 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
MMP11-213ENST00000493132 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
MMP11-213ENST00000493132 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
MMP11-213ENST00000493132 DNAJC5BQ9UF47 199 aa27.44■■□□□ 1.98
MMP11-213ENST00000493132 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.93
MMP11-213ENST00000493132 CC2D2AQ9P2K1 1620 aa27.07■■□□□ 1.92
MMP11-213ENST00000493132 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
MMP11-213ENST00000493132 SMARCA4P51532 1647 aa26.6■■□□□ 1.85
MMP11-213ENST00000493132 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
MMP11-213ENST00000493132 ATAD2BQ9ULI0 1458 aa26.4■■□□□ 1.82
MMP11-213ENST00000493132 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
MMP11-213ENST00000493132 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
MMP11-213ENST00000493132 NCAPD3P42695 1498 aa26.35■■□□□ 1.81
MMP11-213ENST00000493132 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
MMP11-213ENST00000493132 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
MMP11-213ENST00000493132 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
MMP11-213ENST00000493132 WIZO95785 1651 aa26.12■■□□□ 1.77
MMP11-213ENST00000493132 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
MMP11-213ENST00000493132 NESP48681 1621 aa25.87■■□□□ 1.73
MMP11-213ENST00000493132 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
MMP11-213ENST00000493132 TOP2AP11388 1531 aaKnown RBP25.81■■□□□ 1.72
MMP11-213ENST00000493132 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
MMP11-213ENST00000493132 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
MMP11-213ENST00000493132 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
MMP11-213ENST00000493132 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
MMP11-213ENST00000493132 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
MMP11-213ENST00000493132 CUX2O14529 1486 aa25.52■■□□□ 1.68
MMP11-213ENST00000493132 CCDC88BA6NC98 1476 aa25.45■■□□□ 1.66
MMP11-213ENST00000493132 CFTRP13569 1480 aa25.43■■□□□ 1.66
MMP11-213ENST00000493132 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
MMP11-213ENST00000493132 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
MMP11-213ENST00000493132 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
MMP11-213ENST00000493132 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
MMP11-213ENST00000493132 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
MMP11-213ENST00000493132 WDR62O43379 1518 aa25.26■■□□□ 1.63
MMP11-213ENST00000493132 URB2Q14146 1524 aaKnown RBP25.13■■□□□ 1.61
MMP11-213ENST00000493132 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
MMP11-213ENST00000493132 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
MMP11-213ENST00000493132 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
MMP11-213ENST00000493132 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
MMP11-213ENST00000493132 DNAJC5Q9H3Z4 198 aa24.76■■□□□ 1.55
MMP11-213ENST00000493132 CUX1P39880 1505 aa24.75■■□□□ 1.55
MMP11-213ENST00000493132 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
MMP11-213ENST00000493132 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
MMP11-213ENST00000493132 TARBP1Q13395 1621 aaKnown RBP24.7■■□□□ 1.54
MMP11-213ENST00000493132 EIF4G3O43432 1585 aaKnown RBP24.7■■□□□ 1.54
MMP11-213ENST00000493132 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
MMP11-213ENST00000493132 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
MMP11-213ENST00000493132 SOGA1O94964 1423 aa24.6■■□□□ 1.53
MMP11-213ENST00000493132 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.526e-9■■□□□ 14
MMP11-213ENST00000493132 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
MMP11-213ENST00000493132 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
MMP11-213ENST00000493132 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
MMP11-213ENST00000493132 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
MMP11-213ENST00000493132 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
MMP11-213ENST00000493132 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
MMP11-213ENST00000493132 CHD1O14646 1710 aa24.45■■□□□ 1.5
MMP11-213ENST00000493132 PBRM1Q86U86 1689 aa24.42■■□□□ 1.5
MMP11-213ENST00000493132 ABCA10Q8WWZ4 1543 aa24.39■■□□□ 1.49
MMP11-213ENST00000493132 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
MMP11-213ENST00000493132 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
MMP11-213ENST00000493132 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
MMP11-213ENST00000493132 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
MMP11-213ENST00000493132 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
MMP11-213ENST00000493132 FBLN2P98095 1184 aa24.31■■□□□ 1.48
MMP11-213ENST00000493132 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
MMP11-213ENST00000493132 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
MMP11-213ENST00000493132 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
MMP11-213ENST00000493132 CHMP7Q8WUX9 453 aaPredicted RBP24.17■■□□□ 1.46
MMP11-213ENST00000493132 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.46
MMP11-213ENST00000493132 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.46
MMP11-213ENST00000493132 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.46
MMP11-213ENST00000493132 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
MMP11-213ENST00000493132 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
MMP11-213ENST00000493132 CLASP1Q7Z460 1538 aa24.08■■□□□ 1.45
MMP11-213ENST00000493132 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
MMP11-213ENST00000493132 GRIN2AQ12879 1464 aa24.05■■□□□ 1.44
MMP11-213ENST00000493132 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
MMP11-213ENST00000493132 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
MMP11-213ENST00000493132 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
MMP11-213ENST00000493132 CUL7Q14999 1698 aa23.94■■□□□ 1.42
MMP11-213ENST00000493132 NUP160Q12769 1436 aa23.9■■□□□ 1.42
MMP11-213ENST00000493132 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
MMP11-213ENST00000493132 IGF1RP08069 1367 aa23.85■■□□□ 1.41
MMP11-213ENST00000493132 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
MMP11-213ENST00000493132 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
MMP11-213ENST00000493132 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
MMP11-213ENST00000493132 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
MMP11-213ENST00000493132 CARMIL1Q5VZK9 1371 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms