RNA–Protein interactions for RNA: ENST00000493092.1

APH1A-209, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-209ENST00000493092 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
APH1A-209ENST00000493092 CCDC180Q9P1Z9 1646 aa28.02■■■□□ 2.08
APH1A-209ENST00000493092 ABCC9O60706 1549 aa27.88■■■□□ 2.05
APH1A-209ENST00000493092 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
APH1A-209ENST00000493092 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
APH1A-209ENST00000493092 NACADO15069 1562 aa26.46■■□□□ 1.83
APH1A-209ENST00000493092 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
APH1A-209ENST00000493092 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
APH1A-209ENST00000493092 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
APH1A-209ENST00000493092 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
APH1A-209ENST00000493092 DCAF1Q9Y4B6 1507 aa25.96■■□□□ 1.75
APH1A-209ENST00000493092 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
APH1A-209ENST00000493092 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
APH1A-209ENST00000493092 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
APH1A-209ENST00000493092 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
APH1A-209ENST00000493092 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
APH1A-209ENST00000493092 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
APH1A-209ENST00000493092 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
APH1A-209ENST00000493092 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
APH1A-209ENST00000493092 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
APH1A-209ENST00000493092 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
APH1A-209ENST00000493092 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
APH1A-209ENST00000493092 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
APH1A-209ENST00000493092 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
APH1A-209ENST00000493092 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
APH1A-209ENST00000493092 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
APH1A-209ENST00000493092 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
APH1A-209ENST00000493092 NESP48681 1621 aa24.06■■□□□ 1.44
APH1A-209ENST00000493092 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
APH1A-209ENST00000493092 WIZO95785 1651 aa23.99■■□□□ 1.43
APH1A-209ENST00000493092 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
APH1A-209ENST00000493092 CUX2O14529 1486 aa23.83■■□□□ 1.41
APH1A-209ENST00000493092 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
APH1A-209ENST00000493092 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
APH1A-209ENST00000493092 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
APH1A-209ENST00000493092 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
APH1A-209ENST00000493092 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
APH1A-209ENST00000493092 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
APH1A-209ENST00000493092 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
APH1A-209ENST00000493092 CFTRP13569 1480 aa23.54■■□□□ 1.36
APH1A-209ENST00000493092 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
APH1A-209ENST00000493092 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
APH1A-209ENST00000493092 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
APH1A-209ENST00000493092 CEP164Q9UPV0 1460 aa23.46■■□□□ 1.35
APH1A-209ENST00000493092 WDR62O43379 1518 aa23.42■■□□□ 1.34
APH1A-209ENST00000493092 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
APH1A-209ENST00000493092 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
APH1A-209ENST00000493092 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
APH1A-209ENST00000493092 TOPBP1Q92547 1522 aa23.08■■□□□ 1.28
APH1A-209ENST00000493092 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
APH1A-209ENST00000493092 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
APH1A-209ENST00000493092 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
APH1A-209ENST00000493092 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
APH1A-209ENST00000493092 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
APH1A-209ENST00000493092 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
APH1A-209ENST00000493092 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
APH1A-209ENST00000493092 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.24
APH1A-209ENST00000493092 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
APH1A-209ENST00000493092 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
APH1A-209ENST00000493092 CUX1P39880 1505 aa22.8■■□□□ 1.24
APH1A-209ENST00000493092 SOGA1O94964 1423 aa22.76■■□□□ 1.23
APH1A-209ENST00000493092 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
APH1A-209ENST00000493092 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
APH1A-209ENST00000493092 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
APH1A-209ENST00000493092 FBLN2P98095 1184 aa22.6■■□□□ 1.21
APH1A-209ENST00000493092 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
APH1A-209ENST00000493092 CHD1O14646 1710 aa22.54■■□□□ 1.2
APH1A-209ENST00000493092 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
APH1A-209ENST00000493092 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.19
APH1A-209ENST00000493092 GRIN2BQ13224 1484 aa22.51■■□□□ 1.19
APH1A-209ENST00000493092 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
APH1A-209ENST00000493092 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
APH1A-209ENST00000493092 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
APH1A-209ENST00000493092 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
APH1A-209ENST00000493092 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
APH1A-209ENST00000493092 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
APH1A-209ENST00000493092 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
APH1A-209ENST00000493092 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
APH1A-209ENST00000493092 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
APH1A-209ENST00000493092 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
APH1A-209ENST00000493092 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
APH1A-209ENST00000493092 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
APH1A-209ENST00000493092 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
APH1A-209ENST00000493092 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
APH1A-209ENST00000493092 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.17
APH1A-209ENST00000493092 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.17
APH1A-209ENST00000493092 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
APH1A-209ENST00000493092 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
APH1A-209ENST00000493092 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
APH1A-209ENST00000493092 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
APH1A-209ENST00000493092 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
APH1A-209ENST00000493092 CEP170Q5SW79 1584 aa22.15■■□□□ 1.14
APH1A-209ENST00000493092 NUP160Q12769 1436 aa22.14■■□□□ 1.14
APH1A-209ENST00000493092 ERCC6L2Q5T890 1561 aa22.07■■□□□ 1.12
APH1A-209ENST00000493092 IGF1RP08069 1367 aa22.05■■□□□ 1.12
APH1A-209ENST00000493092 KIF27Q86VH2 1401 aa22.05■■□□□ 1.12
APH1A-209ENST00000493092 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
APH1A-209ENST00000493092 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
APH1A-209ENST00000493092 JPH4Q96JJ6 628 aa21.94■■□□□ 1.1
APH1A-209ENST00000493092 PRG4Q92954 1404 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms