RNA–Protein interactions for RNA: ENST00000493051.1

NPHP1-210, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-210ENST00000493051 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
NPHP1-210ENST00000493051 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
NPHP1-210ENST00000493051 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
NPHP1-210ENST00000493051 ABCC9O60706 1549 aa19.37■□□□□ 0.69
NPHP1-210ENST00000493051 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
NPHP1-210ENST00000493051 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
NPHP1-210ENST00000493051 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
NPHP1-210ENST00000493051 NACADO15069 1562 aa18.57■□□□□ 0.56
NPHP1-210ENST00000493051 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
NPHP1-210ENST00000493051 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
NPHP1-210ENST00000493051 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
NPHP1-210ENST00000493051 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
NPHP1-210ENST00000493051 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
NPHP1-210ENST00000493051 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
NPHP1-210ENST00000493051 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
NPHP1-210ENST00000493051 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
NPHP1-210ENST00000493051 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
NPHP1-210ENST00000493051 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
NPHP1-210ENST00000493051 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
NPHP1-210ENST00000493051 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
NPHP1-210ENST00000493051 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
NPHP1-210ENST00000493051 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
NPHP1-210ENST00000493051 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
NPHP1-210ENST00000493051 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
NPHP1-210ENST00000493051 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
NPHP1-210ENST00000493051 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
NPHP1-210ENST00000493051 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
NPHP1-210ENST00000493051 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
NPHP1-210ENST00000493051 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
NPHP1-210ENST00000493051 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.31
NPHP1-210ENST00000493051 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
NPHP1-210ENST00000493051 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
NPHP1-210ENST00000493051 WIZO95785 1651 aa16.83■□□□□ 0.28
NPHP1-210ENST00000493051 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
NPHP1-210ENST00000493051 NESP48681 1621 aa16.73■□□□□ 0.27
NPHP1-210ENST00000493051 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
NPHP1-210ENST00000493051 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
NPHP1-210ENST00000493051 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
NPHP1-210ENST00000493051 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
NPHP1-210ENST00000493051 CUX2O14529 1486 aa16.57■□□□□ 0.24
NPHP1-210ENST00000493051 CFTRP13569 1480 aa16.55■□□□□ 0.24
NPHP1-210ENST00000493051 FOXD1Q16676 465 aa16.55■□□□□ 0.24
NPHP1-210ENST00000493051 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
NPHP1-210ENST00000493051 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
NPHP1-210ENST00000493051 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
NPHP1-210ENST00000493051 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
NPHP1-210ENST00000493051 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
NPHP1-210ENST00000493051 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
NPHP1-210ENST00000493051 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
NPHP1-210ENST00000493051 WDR62O43379 1518 aa16.33■□□□□ 0.2
NPHP1-210ENST00000493051 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
NPHP1-210ENST00000493051 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
NPHP1-210ENST00000493051 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
NPHP1-210ENST00000493051 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
NPHP1-210ENST00000493051 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
NPHP1-210ENST00000493051 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
NPHP1-210ENST00000493051 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
NPHP1-210ENST00000493051 POLA1P09884 1462 aaPredicted RBP16.03■□□□□ 0.16
NPHP1-210ENST00000493051 SOGA1O94964 1423 aa16.03■□□□□ 0.16
NPHP1-210ENST00000493051 CUX1P39880 1505 aa16.01■□□□□ 0.15
NPHP1-210ENST00000493051 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
NPHP1-210ENST00000493051 POTEDQ86YR6 584 aa16■□□□□ 0.15
NPHP1-210ENST00000493051 OSCARQ8IYS5 282 aa16■□□□□ 0.15
NPHP1-210ENST00000493051 FGD5Q6ZNL6 1462 aa15.98■□□□□ 0.15
NPHP1-210ENST00000493051 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
NPHP1-210ENST00000493051 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
NPHP1-210ENST00000493051 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
NPHP1-210ENST00000493051 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
NPHP1-210ENST00000493051 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
NPHP1-210ENST00000493051 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
NPHP1-210ENST00000493051 FBLN2P98095 1184 aa15.86■□□□□ 0.13
NPHP1-210ENST00000493051 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
NPHP1-210ENST00000493051 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
NPHP1-210ENST00000493051 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
NPHP1-210ENST00000493051 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
NPHP1-210ENST00000493051 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
NPHP1-210ENST00000493051 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
NPHP1-210ENST00000493051 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
NPHP1-210ENST00000493051 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
NPHP1-210ENST00000493051 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
NPHP1-210ENST00000493051 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
NPHP1-210ENST00000493051 SYNJ2O15056 1496 aa15.71■□□□□ 0.11
NPHP1-210ENST00000493051 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
NPHP1-210ENST00000493051 MSH5O43196 834 aa15.68■□□□□ 0.1
NPHP1-210ENST00000493051 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
NPHP1-210ENST00000493051 CHD1O14646 1710 aa15.65■□□□□ 0.1
NPHP1-210ENST00000493051 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
NPHP1-210ENST00000493051 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
NPHP1-210ENST00000493051 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
NPHP1-210ENST00000493051 PBRM1Q86U86 1689 aa15.63■□□□□ 0.09
NPHP1-210ENST00000493051 IGF1RP08069 1367 aa15.61■□□□□ 0.09
NPHP1-210ENST00000493051 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
NPHP1-210ENST00000493051 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
NPHP1-210ENST00000493051 CYB5RLQ6IPT4 315 aa15.57■□□□□ 0.08
NPHP1-210ENST00000493051 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
NPHP1-210ENST00000493051 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
NPHP1-210ENST00000493051 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
NPHP1-210ENST00000493051 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
NPHP1-210ENST00000493051 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
NPHP1-210ENST00000493051 NUP160Q12769 1436 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms