RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 NISCHQ9Y2I1 1504 aa40.66■■■■■ 4.1
C9orf78-206ENST00000492991 CCDC180Q9P1Z9 1646 aa36.38■■■■□ 3.41
C9orf78-206ENST00000492991 ABCC9O60706 1549 aa36.18■■■■□ 3.38
C9orf78-206ENST00000492991 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.13
C9orf78-206ENST00000492991 NACADO15069 1562 aa34.42■■■■□ 3.1
C9orf78-206ENST00000492991 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
C9orf78-206ENST00000492991 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
C9orf78-206ENST00000492991 DNAJC5BQ9UF47 199 aa33.86■■■■□ 3.01
C9orf78-206ENST00000492991 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
C9orf78-206ENST00000492991 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
C9orf78-206ENST00000492991 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
C9orf78-206ENST00000492991 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
C9orf78-206ENST00000492991 BICRAQ9NZM4 1560 aa33.53■■■□□ 2.96
C9orf78-206ENST00000492991 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
C9orf78-206ENST00000492991 SCRIBQ14160 1630 aa33.05■■■□□ 2.88
C9orf78-206ENST00000492991 CC2D2AQ9P2K1 1620 aa32.7■■■□□ 2.83
C9orf78-206ENST00000492991 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.82
C9orf78-206ENST00000492991 CECR2Q9BXF3 1484 aa32.62■■■□□ 2.81
C9orf78-206ENST00000492991 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
C9orf78-206ENST00000492991 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
C9orf78-206ENST00000492991 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
C9orf78-206ENST00000492991 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
C9orf78-206ENST00000492991 BAZ1AQ9NRL2 1556 aaPredicted RBP31.55■■■□□ 2.64
C9orf78-206ENST00000492991 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
C9orf78-206ENST00000492991 PEG3Q9GZU2 1588 aa31.4■■■□□ 2.62
C9orf78-206ENST00000492991 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
C9orf78-206ENST00000492991 MROH2BQ7Z745 1585 aa31.27■■■□□ 2.6
C9orf78-206ENST00000492991 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
C9orf78-206ENST00000492991 CUX2O14529 1486 aa31.23■■■□□ 2.59
C9orf78-206ENST00000492991 NESP48681 1621 aa31.11■■■□□ 2.57
C9orf78-206ENST00000492991 DNAJC5Q9H3Z4 198 aa31.07■■■□□ 2.56
C9orf78-206ENST00000492991 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
C9orf78-206ENST00000492991 PDS5BQ9NTI5 1447 aa30.88■■■□□ 2.53
C9orf78-206ENST00000492991 WIZO95785 1651 aa30.85■■■□□ 2.53
C9orf78-206ENST00000492991 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
C9orf78-206ENST00000492991 THOC2Q8NI27 1593 aaKnown RBP30.78■■■□□ 2.52
C9orf78-206ENST00000492991 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
C9orf78-206ENST00000492991 KIF21AQ7Z4S6 1674 aa30.66■■■□□ 2.5
C9orf78-206ENST00000492991 TOP2AP11388 1531 aaKnown RBP30.55■■■□□ 2.48
C9orf78-206ENST00000492991 MRC2Q9UBG0 1479 aa30.53■■■□□ 2.48
C9orf78-206ENST00000492991 CFTRP13569 1480 aa30.5■■■□□ 2.47
C9orf78-206ENST00000492991 WDR62O43379 1518 aa30.45■■■□□ 2.47
C9orf78-206ENST00000492991 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
C9orf78-206ENST00000492991 FANCD2Q9BXW9 1451 aa30.42■■■□□ 2.46
C9orf78-206ENST00000492991 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
C9orf78-206ENST00000492991 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
C9orf78-206ENST00000492991 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
C9orf78-206ENST00000492991 ABCC8Q09428 1581 aa29.91■■■□□ 2.38
C9orf78-206ENST00000492991 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
C9orf78-206ENST00000492991 OSCARQ8IYS5 282 aa29.86■■■□□ 2.37
C9orf78-206ENST00000492991 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
C9orf78-206ENST00000492991 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
C9orf78-206ENST00000492991 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
C9orf78-206ENST00000492991 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
C9orf78-206ENST00000492991 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
C9orf78-206ENST00000492991 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
C9orf78-206ENST00000492991 EIF4G3O43432 1585 aaKnown RBP29.53■■■□□ 2.32
C9orf78-206ENST00000492991 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.312e-8■■■■□ 20.4
C9orf78-206ENST00000492991 SOGA1O94964 1423 aa29.47■■■□□ 2.31
C9orf78-206ENST00000492991 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
C9orf78-206ENST00000492991 RAD54L2Q9Y4B4 1467 aa29.41■■■□□ 2.3
C9orf78-206ENST00000492991 FGD5Q6ZNL6 1462 aa29.37■■■□□ 2.29
C9orf78-206ENST00000492991 CUX1P39880 1505 aa29.37■■■□□ 2.29
C9orf78-206ENST00000492991 WDR97A6NE52 1622 aa29.36■■■□□ 2.29
C9orf78-206ENST00000492991 TDRD9Q8NDG6 1382 aaKnown RBP29.35■■■□□ 2.29
C9orf78-206ENST00000492991 RIMBP3CA6NJZ7 1639 aa29.31■■■□□ 2.28
C9orf78-206ENST00000492991 RIMBP3BA6NNM3 1639 aa29.31■■■□□ 2.28
C9orf78-206ENST00000492991 RIMBP3Q9UFD9 1639 aa29.31■■■□□ 2.28
C9orf78-206ENST00000492991 ARHGEF11O15085 1522 aa29.28■■■□□ 2.28
C9orf78-206ENST00000492991 FBLN2P98095 1184 aa29.26■■■□□ 2.27
C9orf78-206ENST00000492991 CHD1O14646 1710 aa29.24■■■□□ 2.27
C9orf78-206ENST00000492991 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
C9orf78-206ENST00000492991 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
C9orf78-206ENST00000492991 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
C9orf78-206ENST00000492991 CHMP7Q8WUX9 453 aaPredicted RBP29.14■■■□□ 2.26
C9orf78-206ENST00000492991 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
C9orf78-206ENST00000492991 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
C9orf78-206ENST00000492991 CYB5RLQ6IPT4 315 aa29.08■■■□□ 2.25
C9orf78-206ENST00000492991 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
C9orf78-206ENST00000492991 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
C9orf78-206ENST00000492991 CLASP1Q7Z460 1538 aa29.02■■■□□ 2.24
C9orf78-206ENST00000492991 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
C9orf78-206ENST00000492991 ARAP1Q96P48 1450 aa28.99■■■□□ 2.23
C9orf78-206ENST00000492991 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
C9orf78-206ENST00000492991 TOP2BQ02880 1626 aa28.97■■■□□ 2.23
C9orf78-206ENST00000492991 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
C9orf78-206ENST00000492991 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
C9orf78-206ENST00000492991 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
C9orf78-206ENST00000492991 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
C9orf78-206ENST00000492991 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
C9orf78-206ENST00000492991 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
C9orf78-206ENST00000492991 NUP160Q12769 1436 aa28.73■■■□□ 2.19
C9orf78-206ENST00000492991 TRHP20396 242 aaPredicted RBP28.67■■■□□ 2.18
C9orf78-206ENST00000492991 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
C9orf78-206ENST00000492991 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
C9orf78-206ENST00000492991 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
C9orf78-206ENST00000492991 JPH4Q96JJ6 628 aa28.47■■■□□ 2.15
C9orf78-206ENST00000492991 IGF1RP08069 1367 aa28.46■■■□□ 2.15
C9orf78-206ENST00000492991 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
C9orf78-206ENST00000492991 PRG4Q92954 1404 aaPredicted RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms