RNA–Protein interactions for RNA: ENST00000492565.1

CAPN2-210, Transcript of calpain 2, humanhuman

TSL 5

Gene CAPN2, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-210ENST00000492565 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
CAPN2-210ENST00000492565 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
CAPN2-210ENST00000492565 ABCC9O60706 1549 aa19.76■□□□□ 0.75
CAPN2-210ENST00000492565 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
CAPN2-210ENST00000492565 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
CAPN2-210ENST00000492565 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
CAPN2-210ENST00000492565 NACADO15069 1562 aa19.52■□□□□ 0.71
CAPN2-210ENST00000492565 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
CAPN2-210ENST00000492565 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
CAPN2-210ENST00000492565 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
CAPN2-210ENST00000492565 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
CAPN2-210ENST00000492565 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
CAPN2-210ENST00000492565 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
CAPN2-210ENST00000492565 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
CAPN2-210ENST00000492565 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
CAPN2-210ENST00000492565 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
CAPN2-210ENST00000492565 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
CAPN2-210ENST00000492565 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
CAPN2-210ENST00000492565 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
CAPN2-210ENST00000492565 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
CAPN2-210ENST00000492565 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
CAPN2-210ENST00000492565 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
CAPN2-210ENST00000492565 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
CAPN2-210ENST00000492565 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
CAPN2-210ENST00000492565 WIZO95785 1651 aa17.95■□□□□ 0.46
CAPN2-210ENST00000492565 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
CAPN2-210ENST00000492565 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
CAPN2-210ENST00000492565 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
CAPN2-210ENST00000492565 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
CAPN2-210ENST00000492565 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
CAPN2-210ENST00000492565 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
CAPN2-210ENST00000492565 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
CAPN2-210ENST00000492565 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
CAPN2-210ENST00000492565 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
CAPN2-210ENST00000492565 CFTRP13569 1480 aa17.4■□□□□ 0.38
CAPN2-210ENST00000492565 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
CAPN2-210ENST00000492565 NESP48681 1621 aa17.23■□□□□ 0.35
CAPN2-210ENST00000492565 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
CAPN2-210ENST00000492565 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
CAPN2-210ENST00000492565 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
CAPN2-210ENST00000492565 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
CAPN2-210ENST00000492565 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
CAPN2-210ENST00000492565 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
CAPN2-210ENST00000492565 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
CAPN2-210ENST00000492565 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
CAPN2-210ENST00000492565 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
CAPN2-210ENST00000492565 WDR62O43379 1518 aa17.05■□□□□ 0.32
CAPN2-210ENST00000492565 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
CAPN2-210ENST00000492565 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
CAPN2-210ENST00000492565 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
CAPN2-210ENST00000492565 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
CAPN2-210ENST00000492565 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
CAPN2-210ENST00000492565 CUX1P39880 1505 aa16.96■□□□□ 0.31
CAPN2-210ENST00000492565 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
CAPN2-210ENST00000492565 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
CAPN2-210ENST00000492565 CUX2O14529 1486 aa16.88■□□□□ 0.29
CAPN2-210ENST00000492565 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
CAPN2-210ENST00000492565 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
CAPN2-210ENST00000492565 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
CAPN2-210ENST00000492565 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
CAPN2-210ENST00000492565 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.28
CAPN2-210ENST00000492565 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
CAPN2-210ENST00000492565 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
CAPN2-210ENST00000492565 SOGA1O94964 1423 aa16.69■□□□□ 0.26
CAPN2-210ENST00000492565 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
CAPN2-210ENST00000492565 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
CAPN2-210ENST00000492565 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
CAPN2-210ENST00000492565 EEA1Q15075 1411 aa16.66■□□□□ 0.26
CAPN2-210ENST00000492565 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
CAPN2-210ENST00000492565 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
CAPN2-210ENST00000492565 CUL7Q14999 1698 aa16.61■□□□□ 0.25
CAPN2-210ENST00000492565 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
CAPN2-210ENST00000492565 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
CAPN2-210ENST00000492565 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
CAPN2-210ENST00000492565 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
CAPN2-210ENST00000492565 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
CAPN2-210ENST00000492565 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
CAPN2-210ENST00000492565 KIF21BO75037 1637 aa16.49■□□□□ 0.23
CAPN2-210ENST00000492565 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
CAPN2-210ENST00000492565 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■■■■□ 19.5
CAPN2-210ENST00000492565 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
CAPN2-210ENST00000492565 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
CAPN2-210ENST00000492565 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
CAPN2-210ENST00000492565 IGF1RP08069 1367 aa16.41■□□□□ 0.22
CAPN2-210ENST00000492565 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
CAPN2-210ENST00000492565 CHD1O14646 1710 aa16.41■□□□□ 0.22
CAPN2-210ENST00000492565 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
CAPN2-210ENST00000492565 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
CAPN2-210ENST00000492565 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
CAPN2-210ENST00000492565 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
CAPN2-210ENST00000492565 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
CAPN2-210ENST00000492565 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
CAPN2-210ENST00000492565 GOLGA3Q08378 1498 aa16.32■□□□□ 0.2
CAPN2-210ENST00000492565 NUP160Q12769 1436 aa16.27■□□□□ 0.19
CAPN2-210ENST00000492565 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
CAPN2-210ENST00000492565 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
CAPN2-210ENST00000492565 IQGAP2Q13576 1575 aa16.21■□□□□ 0.19
CAPN2-210ENST00000492565 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
CAPN2-210ENST00000492565 KIAA0586Q9BVV6 1533 aa16.19■□□□□ 0.18
CAPN2-210ENST00000492565 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms