RNA–Protein interactions for RNA: ENST00000492452.2

C3orf58-205, Transcript of chromosome 3 open reading frame 58, humanhuman

TSL 2

Gene C3orf58, Length 730 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58-205ENST00000492452 NISCHQ9Y2I1 1504 aa55.46■■■■■ 6.47
C3orf58-205ENST00000492452 CCDC180Q9P1Z9 1646 aa49.58■■■■■ 5.53
C3orf58-205ENST00000492452 ABCC9O60706 1549 aa48.74■■■■■ 5.39
C3orf58-205ENST00000492452 RB1CC1Q8TDY2 1594 aa46.84■■■■■ 5.09
C3orf58-205ENST00000492452 NACADO15069 1562 aa46.69■■■■■ 5.06
C3orf58-205ENST00000492452 DCAF8L2P0C7V8 631 aa46.45■■■■■ 5.03
C3orf58-205ENST00000492452 MYO15BQ96JP2 1530 aa46.3■■■■■ 5
C3orf58-205ENST00000492452 ZCCHC6Q5VYS8 1495 aaKnown RBP46.12■■■■■ 4.97
C3orf58-205ENST00000492452 DCAF1Q9Y4B6 1507 aa45.93■■■■■ 4.94
C3orf58-205ENST00000492452 UNC13AQ9UPW8 1703 aa45.7■■■■■ 4.91
C3orf58-205ENST00000492452 PABPN1Q86U42 306 aaKnown RBP eCLIP45.42■■■■■ 4.86
C3orf58-205ENST00000492452 BICRAQ9NZM4 1560 aa45.32■■■■■ 4.85
C3orf58-205ENST00000492452 SCRIBQ14160 1630 aa45.09■■■■■ 4.81
C3orf58-205ENST00000492452 SHROOM4Q9ULL8 1493 aa45■■■■■ 4.79
C3orf58-205ENST00000492452 DNAJC5BQ9UF47 199 aa44.97■■■■■ 4.79
C3orf58-205ENST00000492452 EIF4G1Q04637 1599 aaKnown RBP44.21■■■■■ 4.67
C3orf58-205ENST00000492452 CC2D2AQ9P2K1 1620 aa44.12■■■■■ 4.65
C3orf58-205ENST00000492452 CECR2Q9BXF3 1484 aa43.89■■■■■ 4.62
C3orf58-205ENST00000492452 SMARCA4P51532 1647 aa43.13■■■■■ 4.49
C3orf58-205ENST00000492452 BAZ1AQ9NRL2 1556 aaPredicted RBP43.07■■■■■ 4.48
C3orf58-205ENST00000492452 NCAPD3P42695 1498 aa43.03■■■■■ 4.48
C3orf58-205ENST00000492452 SMARCA2P51531 1590 aa42.99■■■■■ 4.47
C3orf58-205ENST00000492452 ATAD2BQ9ULI0 1458 aa42.97■■■■■ 4.47
C3orf58-205ENST00000492452 HMGXB3Q12766 1538 aa42.83■■■■■ 4.45
C3orf58-205ENST00000492452 PEG3Q9GZU2 1588 aa42.74■■■■■ 4.43
C3orf58-205ENST00000492452 MROH2BQ7Z745 1585 aa42.68■■■■■ 4.42
C3orf58-205ENST00000492452 BAZ1BQ9UIG0 1483 aaKnown RBP42.64■■■■■ 4.42
C3orf58-205ENST00000492452 WIZO95785 1651 aa42.21■■■■■ 4.35
C3orf58-205ENST00000492452 ERCC6Q03468 1493 aa42.14■■■■■ 4.34
C3orf58-205ENST00000492452 RSF1Q96T23 1441 aaPredicted RBP42.06■■■■■ 4.32
C3orf58-205ENST00000492452 NESP48681 1621 aa42.02■■■■■ 4.32
C3orf58-205ENST00000492452 LAMC3Q9Y6N6 1575 aa42.01■■■■■ 4.32
C3orf58-205ENST00000492452 CUX2O14529 1486 aa41.85■■■■■ 4.29
C3orf58-205ENST00000492452 TOP2AP11388 1531 aaKnown RBP41.8■■■■■ 4.28
C3orf58-205ENST00000492452 CADPSQ9ULU8 1353 aa41.75■■■■■ 4.27
C3orf58-205ENST00000492452 PDS5BQ9NTI5 1447 aa41.74■■■■■ 4.27
C3orf58-205ENST00000492452 KIF21AQ7Z4S6 1674 aa41.6■■■■■ 4.25
C3orf58-205ENST00000492452 THOC2Q8NI27 1593 aaKnown RBP41.56■■■■■ 4.24
C3orf58-205ENST00000492452 CFTRP13569 1480 aa41.42■■■■■ 4.22
C3orf58-205ENST00000492452 MRC2Q9UBG0 1479 aa41.31■■■■■ 4.2
C3orf58-205ENST00000492452 CEP164Q9UPV0 1460 aa41.3■■■■■ 4.2
C3orf58-205ENST00000492452 FANCD2Q9BXW9 1451 aa41.28■■■■■ 4.2
C3orf58-205ENST00000492452 CCDC88BA6NC98 1476 aa41.25■■■■■ 4.19
C3orf58-205ENST00000492452 WDR62O43379 1518 aa41.18■■■■■ 4.18
C3orf58-205ENST00000492452 PRDM2Q13029 1718 aa41.17■■■■■ 4.18
C3orf58-205ENST00000492452 DNAJC5Q9H3Z4 198 aa40.94■■■■■ 4.14
C3orf58-205ENST00000492452 URB2Q14146 1524 aaKnown RBP40.84■■■■■ 4.13
C3orf58-205ENST00000492452 SUPT5HO00267 1087 aaKnown RBP40.67■■■■■ 4.1
C3orf58-205ENST00000492452 ABCC8Q09428 1581 aa40.65■■■■■ 4.1
C3orf58-205ENST00000492452 TOPBP1Q92547 1522 aa40.56■■■■■ 4.08
C3orf58-205ENST00000492452 DNMBPQ6XZF7 1577 aa40.52■■■■■ 4.08
C3orf58-205ENST00000492452 IFT140Q96RY7 1462 aa40.45■■■■■ 4.07
C3orf58-205ENST00000492452 ZNF608Q9ULD9 1512 aaPredicted RBP40.2■■■■■ 4.03
C3orf58-205ENST00000492452 POLA1P09884 1462 aaPredicted RBP40.19■■■■■ 4.02
C3orf58-205ENST00000492452 TARBP1Q13395 1621 aaKnown RBP40.14■■■■■ 4.02
C3orf58-205ENST00000492452 EIF4G3O43432 1585 aaKnown RBP40.1■■■■■ 4.01
C3orf58-205ENST00000492452 CUX1P39880 1505 aa40.07■■■■■ 4.01
C3orf58-205ENST00000492452 FGD5Q6ZNL6 1462 aa40.04■■■■■ 4
C3orf58-205ENST00000492452 SOGA1O94964 1423 aa40.02■■■■■ 4
C3orf58-205ENST00000492452 OSCARQ8IYS5 282 aa40.02■■■■■ 4
C3orf58-205ENST00000492452 RAD54L2Q9Y4B4 1467 aa39.96■■■■□ 3.99
C3orf58-205ENST00000492452 WDR97A6NE52 1622 aa39.94■■■■□ 3.98
C3orf58-205ENST00000492452 AQRO60306 1485 aaKnown RBP eCLIP39.93■■■■□ 3.98
C3orf58-205ENST00000492452 TDRD9Q8NDG6 1382 aaKnown RBP39.8■■■■□ 3.96
C3orf58-205ENST00000492452 WRNQ14191 1432 aaPredicted RBP eCLIP39.73■■■■□ 3.95
C3orf58-205ENST00000492452 BIVM-ERCC5R4GMW8 1640 aa39.7■■■■□ 3.95
C3orf58-205ENST00000492452 TOP2BQ02880 1626 aa39.69■■■■□ 3.94
C3orf58-205ENST00000492452 CHD1O14646 1710 aa39.67■■■■□ 3.94
C3orf58-205ENST00000492452 ABCA10Q8WWZ4 1543 aa39.65■■■■□ 3.94
C3orf58-205ENST00000492452 GRIN2BQ13224 1484 aa39.64■■■■□ 3.94
C3orf58-205ENST00000492452 MAGI1Q96QZ7 1491 aaPredicted RBP39.61■■■■□ 3.93
C3orf58-205ENST00000492452 SNAPC4Q5SXM2 1469 aa39.6■■■■□ 3.93
C3orf58-205ENST00000492452 SYNJ1O43426 1573 aa39.59■■■■□ 3.93
C3orf58-205ENST00000492452 GAPVD1Q14C86 1478 aa39.57■■■■□ 3.93
C3orf58-205ENST00000492452 FBLN2P98095 1184 aa39.57■■■■□ 3.93
C3orf58-205ENST00000492452 PBRM1Q86U86 1689 aa39.54■■■■□ 3.92
C3orf58-205ENST00000492452 ABCA5Q8WWZ7 1642 aa39.53■■■■□ 3.92
C3orf58-205ENST00000492452 CHMP7Q8WUX9 453 aaPredicted RBP39.44■■■■□ 3.9
C3orf58-205ENST00000492452 SYNJ2O15056 1496 aa39.43■■■■□ 3.9
C3orf58-205ENST00000492452 TRIM41Q8WV44 630 aa39.41■■■■□ 3.9
C3orf58-205ENST00000492452 RIMBP3CA6NJZ7 1639 aa39.39■■■■□ 3.9
C3orf58-205ENST00000492452 RIMBP3BA6NNM3 1639 aa39.39■■■■□ 3.9
C3orf58-205ENST00000492452 RIMBP3Q9UFD9 1639 aa39.39■■■■□ 3.9
C3orf58-205ENST00000492452 ARHGEF11O15085 1522 aa39.35■■■■□ 3.89
C3orf58-205ENST00000492452 CLASP1Q7Z460 1538 aa39.22■■■■□ 3.87
C3orf58-205ENST00000492452 ERICH3Q5RHP9 1530 aa39.2■■■■□ 3.87
C3orf58-205ENST00000492452 ADAMTS12P58397 1594 aa39.18■■■■□ 3.86
C3orf58-205ENST00000492452 FHAD1B1AJZ9 1412 aa39.12■■■■□ 3.85
C3orf58-205ENST00000492452 GRIN2AQ12879 1464 aa39.11■■■■□ 3.85
C3orf58-205ENST00000492452 CYB5RLQ6IPT4 315 aa38.97■■■■□ 3.83
C3orf58-205ENST00000492452 ARAP1Q96P48 1450 aa38.97■■■■□ 3.83
C3orf58-205ENST00000492452 KIF27Q86VH2 1401 aa38.97■■■■□ 3.83
C3orf58-205ENST00000492452 NUP160Q12769 1436 aa38.95■■■■□ 3.83
C3orf58-205ENST00000492452 CEP170Q5SW79 1584 aa38.89■■■■□ 3.82
C3orf58-205ENST00000492452 CUL7Q14999 1698 aa38.81■■■■□ 3.8
C3orf58-205ENST00000492452 IGF1RP08069 1367 aa38.75■■■■□ 3.79
C3orf58-205ENST00000492452 SHROOM2Q13796 1616 aa38.71■■■■□ 3.79
C3orf58-205ENST00000492452 RUSC2Q8N2Y8 1516 aa38.62■■■■□ 3.77
C3orf58-205ENST00000492452 CARMIL1Q5VZK9 1371 aa38.57■■■■□ 3.76
C3orf58-205ENST00000492452 ERCC6L2Q5T890 1561 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms