RNA–Protein interactions for RNA: ENST00000492387.1

IFRD2-215, Transcript of interferon related developmental regulator 2, humanhuman

TSL 2

Gene IFRD2, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD2-215ENST00000492387 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
IFRD2-215ENST00000492387 ABCC9O60706 1549 aa30.17■■■□□ 2.42
IFRD2-215ENST00000492387 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
IFRD2-215ENST00000492387 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
IFRD2-215ENST00000492387 RB1CC1Q8TDY2 1594 aa28.58■■■□□ 2.17
IFRD2-215ENST00000492387 NACADO15069 1562 aa28.36■■■□□ 2.13
IFRD2-215ENST00000492387 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
IFRD2-215ENST00000492387 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
IFRD2-215ENST00000492387 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
IFRD2-215ENST00000492387 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
IFRD2-215ENST00000492387 BICRAQ9NZM4 1560 aa27.87■■■□□ 2.05
IFRD2-215ENST00000492387 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
IFRD2-215ENST00000492387 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
IFRD2-215ENST00000492387 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
IFRD2-215ENST00000492387 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
IFRD2-215ENST00000492387 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
IFRD2-215ENST00000492387 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
IFRD2-215ENST00000492387 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
IFRD2-215ENST00000492387 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
IFRD2-215ENST00000492387 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
IFRD2-215ENST00000492387 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
IFRD2-215ENST00000492387 CUX2O14529 1486 aa26.07■■□□□ 1.76
IFRD2-215ENST00000492387 SMARCA4P51532 1647 aa26■■□□□ 1.75
IFRD2-215ENST00000492387 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
IFRD2-215ENST00000492387 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
IFRD2-215ENST00000492387 SMARCA2P51531 1590 aa25.97■■□□□ 1.75
IFRD2-215ENST00000492387 NESP48681 1621 aa25.89■■□□□ 1.74
IFRD2-215ENST00000492387 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
IFRD2-215ENST00000492387 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
IFRD2-215ENST00000492387 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
IFRD2-215ENST00000492387 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
IFRD2-215ENST00000492387 THOC2Q8NI27 1593 aaKnown RBP25.65■■□□□ 1.7
IFRD2-215ENST00000492387 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
IFRD2-215ENST00000492387 KIF21AQ7Z4S6 1674 aa25.49■■□□□ 1.67
IFRD2-215ENST00000492387 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
IFRD2-215ENST00000492387 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
IFRD2-215ENST00000492387 WIZO95785 1651 aa25.32■■□□□ 1.64
IFRD2-215ENST00000492387 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
IFRD2-215ENST00000492387 WDR62O43379 1518 aa25.25■■□□□ 1.63
IFRD2-215ENST00000492387 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
IFRD2-215ENST00000492387 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
IFRD2-215ENST00000492387 CFTRP13569 1480 aa25.09■■□□□ 1.61
IFRD2-215ENST00000492387 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
IFRD2-215ENST00000492387 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
IFRD2-215ENST00000492387 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
IFRD2-215ENST00000492387 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
IFRD2-215ENST00000492387 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
IFRD2-215ENST00000492387 CCDC88BA6NC98 1476 aa24.73■■□□□ 1.55
IFRD2-215ENST00000492387 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
IFRD2-215ENST00000492387 ZNF608Q9ULD9 1512 aaPredicted RBP24.68■■□□□ 1.54
IFRD2-215ENST00000492387 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
IFRD2-215ENST00000492387 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
IFRD2-215ENST00000492387 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
IFRD2-215ENST00000492387 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
IFRD2-215ENST00000492387 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
IFRD2-215ENST00000492387 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
IFRD2-215ENST00000492387 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
IFRD2-215ENST00000492387 DNMBPQ6XZF7 1577 aa24.47■■□□□ 1.51
IFRD2-215ENST00000492387 ARHGEF11O15085 1522 aa24.47■■□□□ 1.51
IFRD2-215ENST00000492387 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
IFRD2-215ENST00000492387 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.51e-8■■■■■ 39.1
IFRD2-215ENST00000492387 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
IFRD2-215ENST00000492387 CHD1O14646 1710 aa24.32■■□□□ 1.48
IFRD2-215ENST00000492387 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
IFRD2-215ENST00000492387 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
IFRD2-215ENST00000492387 ARAP1Q96P48 1450 aa24.23■■□□□ 1.47
IFRD2-215ENST00000492387 SOGA1O94964 1423 aa24.22■■□□□ 1.47
IFRD2-215ENST00000492387 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
IFRD2-215ENST00000492387 FBLN2P98095 1184 aa24.2■■□□□ 1.46
IFRD2-215ENST00000492387 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
IFRD2-215ENST00000492387 CUX1P39880 1505 aa24.12■■□□□ 1.45
IFRD2-215ENST00000492387 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
IFRD2-215ENST00000492387 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
IFRD2-215ENST00000492387 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
IFRD2-215ENST00000492387 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
IFRD2-215ENST00000492387 TRHP20396 242 aaPredicted RBP24.02■■□□□ 1.44
IFRD2-215ENST00000492387 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
IFRD2-215ENST00000492387 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
IFRD2-215ENST00000492387 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
IFRD2-215ENST00000492387 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
IFRD2-215ENST00000492387 GAPVD1Q14C86 1478 aa23.91■■□□□ 1.42
IFRD2-215ENST00000492387 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
IFRD2-215ENST00000492387 PBRM1Q86U86 1689 aa23.87■■□□□ 1.41
IFRD2-215ENST00000492387 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
IFRD2-215ENST00000492387 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
IFRD2-215ENST00000492387 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
IFRD2-215ENST00000492387 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
IFRD2-215ENST00000492387 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
IFRD2-215ENST00000492387 NUP160Q12769 1436 aa23.68■■□□□ 1.38
IFRD2-215ENST00000492387 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
IFRD2-215ENST00000492387 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
IFRD2-215ENST00000492387 TOP2BQ02880 1626 aa23.65■■□□□ 1.38
IFRD2-215ENST00000492387 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.38
IFRD2-215ENST00000492387 SHROOM2Q13796 1616 aa23.6■■□□□ 1.37
IFRD2-215ENST00000492387 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
IFRD2-215ENST00000492387 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
IFRD2-215ENST00000492387 PRG4Q92954 1404 aaPredicted RBP23.44■■□□□ 1.34
IFRD2-215ENST00000492387 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
IFRD2-215ENST00000492387 JPH4Q96JJ6 628 aa23.42■■□□□ 1.34
IFRD2-215ENST00000492387 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms