RNA–Protein interactions for RNA: ENST00000492271.1

TCEA3-206, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-206ENST00000492271 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
TCEA3-206ENST00000492271 CCDC180Q9P1Z9 1646 aa39■■■■□ 3.83
TCEA3-206ENST00000492271 ABCC9O60706 1549 aa38.72■■■■□ 3.79
TCEA3-206ENST00000492271 RB1CC1Q8TDY2 1594 aa36.96■■■■□ 3.51
TCEA3-206ENST00000492271 NACADO15069 1562 aa36.76■■■■□ 3.48
TCEA3-206ENST00000492271 MYO15BQ96JP2 1530 aa36.34■■■■□ 3.41
TCEA3-206ENST00000492271 DCAF8L2P0C7V8 631 aa36.31■■■■□ 3.4
TCEA3-206ENST00000492271 UNC13AQ9UPW8 1703 aa36.28■■■■□ 3.4
TCEA3-206ENST00000492271 DNAJC5BQ9UF47 199 aa36.21■■■■□ 3.39
TCEA3-206ENST00000492271 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
TCEA3-206ENST00000492271 PABPN1Q86U42 306 aaKnown RBP eCLIP35.99■■■■□ 3.35
TCEA3-206ENST00000492271 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
TCEA3-206ENST00000492271 DCAF1Q9Y4B6 1507 aa35.92■■■■□ 3.34
TCEA3-206ENST00000492271 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
TCEA3-206ENST00000492271 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
TCEA3-206ENST00000492271 CC2D2AQ9P2K1 1620 aa35.06■■■■□ 3.2
TCEA3-206ENST00000492271 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
TCEA3-206ENST00000492271 CECR2Q9BXF3 1484 aa34.88■■■■□ 3.17
TCEA3-206ENST00000492271 NCAPD3P42695 1498 aa33.91■■■■□ 3.02
TCEA3-206ENST00000492271 SMARCA4P51532 1647 aa33.88■■■■□ 3.01
TCEA3-206ENST00000492271 ATAD2BQ9ULI0 1458 aa33.82■■■■□ 3.01
TCEA3-206ENST00000492271 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
TCEA3-206ENST00000492271 HMGXB3Q12766 1538 aa33.74■■■□□ 2.99
TCEA3-206ENST00000492271 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
TCEA3-206ENST00000492271 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
TCEA3-206ENST00000492271 BAZ1BQ9UIG0 1483 aaKnown RBP33.48■■■□□ 2.95
TCEA3-206ENST00000492271 MROH2BQ7Z745 1585 aa33.47■■■□□ 2.95
TCEA3-206ENST00000492271 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
TCEA3-206ENST00000492271 CUX2O14529 1486 aa33.36■■■□□ 2.93
TCEA3-206ENST00000492271 NESP48681 1621 aa33.35■■■□□ 2.93
TCEA3-206ENST00000492271 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
TCEA3-206ENST00000492271 DNAJC5Q9H3Z4 198 aa33.11■■■□□ 2.89
TCEA3-206ENST00000492271 WIZO95785 1651 aa33.09■■■□□ 2.89
TCEA3-206ENST00000492271 THOC2Q8NI27 1593 aaKnown RBP33.08■■■□□ 2.89
TCEA3-206ENST00000492271 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.87
TCEA3-206ENST00000492271 PDS5BQ9NTI5 1447 aa32.86■■■□□ 2.85
TCEA3-206ENST00000492271 CADPSQ9ULU8 1353 aa32.83■■■□□ 2.85
TCEA3-206ENST00000492271 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
TCEA3-206ENST00000492271 TOP2AP11388 1531 aaKnown RBP32.67■■■□□ 2.82
TCEA3-206ENST00000492271 MRC2Q9UBG0 1479 aa32.63■■■□□ 2.81
TCEA3-206ENST00000492271 WDR62O43379 1518 aa32.61■■■□□ 2.81
TCEA3-206ENST00000492271 CFTRP13569 1480 aa32.55■■■□□ 2.8
TCEA3-206ENST00000492271 CEP164Q9UPV0 1460 aa32.52■■■□□ 2.8
TCEA3-206ENST00000492271 FANCD2Q9BXW9 1451 aa32.49■■■□□ 2.79
TCEA3-206ENST00000492271 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
TCEA3-206ENST00000492271 URB2Q14146 1524 aaKnown RBP32.27■■■□□ 2.76
TCEA3-206ENST00000492271 CCDC88BA6NC98 1476 aa32.25■■■□□ 2.75
TCEA3-206ENST00000492271 TOPBP1Q92547 1522 aa31.92■■■□□ 2.7
TCEA3-206ENST00000492271 IFT140Q96RY7 1462 aa31.86■■■□□ 2.69
TCEA3-206ENST00000492271 DNMBPQ6XZF7 1577 aa31.84■■■□□ 2.69
TCEA3-206ENST00000492271 ZNF608Q9ULD9 1512 aaPredicted RBP31.83■■■□□ 2.69
TCEA3-206ENST00000492271 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
TCEA3-206ENST00000492271 OSCARQ8IYS5 282 aa31.72■■■□□ 2.67
TCEA3-206ENST00000492271 EIF4G3O43432 1585 aaKnown RBP31.72■■■□□ 2.67
TCEA3-206ENST00000492271 TARBP1Q13395 1621 aaKnown RBP31.7■■■□□ 2.66
TCEA3-206ENST00000492271 TRIM41Q8WV44 630 aa31.62■■■□□ 2.65
TCEA3-206ENST00000492271 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
TCEA3-206ENST00000492271 AQRO60306 1485 aaKnown RBP eCLIP31.5■■■□□ 2.63
TCEA3-206ENST00000492271 CHD1O14646 1710 aa31.47■■■□□ 2.63
TCEA3-206ENST00000492271 RIMBP3CA6NJZ7 1639 aa31.47■■■□□ 2.63
TCEA3-206ENST00000492271 RIMBP3BA6NNM3 1639 aa31.47■■■□□ 2.63
TCEA3-206ENST00000492271 RIMBP3Q9UFD9 1639 aa31.47■■■□□ 2.63
TCEA3-206ENST00000492271 RAD54L2Q9Y4B4 1467 aa31.45■■■□□ 2.62
TCEA3-206ENST00000492271 CUX1P39880 1505 aa31.44■■■□□ 2.62
TCEA3-206ENST00000492271 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
TCEA3-206ENST00000492271 SOGA1O94964 1423 aa31.38■■■□□ 2.61
TCEA3-206ENST00000492271 WDR97A6NE52 1622 aa31.37■■■□□ 2.61
TCEA3-206ENST00000492271 ARHGEF11O15085 1522 aa31.36■■■□□ 2.61
TCEA3-206ENST00000492271 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
TCEA3-206ENST00000492271 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
TCEA3-206ENST00000492271 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
TCEA3-206ENST00000492271 MAGI1Q96QZ7 1491 aaPredicted RBP31.15■■■□□ 2.58
TCEA3-206ENST00000492271 PBRM1Q86U86 1689 aa31.14■■■□□ 2.58
TCEA3-206ENST00000492271 GRIN2BQ13224 1484 aa31.14■■■□□ 2.57
TCEA3-206ENST00000492271 FBLN2P98095 1184 aa31.12■■■□□ 2.57
TCEA3-206ENST00000492271 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
TCEA3-206ENST00000492271 ABCA5Q8WWZ7 1642 aa31.09■■■□□ 2.57
TCEA3-206ENST00000492271 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
TCEA3-206ENST00000492271 ARAP1Q96P48 1450 aa31.07■■■□□ 2.56
TCEA3-206ENST00000492271 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
TCEA3-206ENST00000492271 GAPVD1Q14C86 1478 aa31.04■■■□□ 2.56
TCEA3-206ENST00000492271 SYNJ1O43426 1573 aa31.03■■■□□ 2.56
TCEA3-206ENST00000492271 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
TCEA3-206ENST00000492271 TOP2BQ02880 1626 aa30.98■■■□□ 2.55
TCEA3-206ENST00000492271 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
TCEA3-206ENST00000492271 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
TCEA3-206ENST00000492271 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
TCEA3-206ENST00000492271 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
TCEA3-206ENST00000492271 GRIN2AQ12879 1464 aa30.76■■■□□ 2.52
TCEA3-206ENST00000492271 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
TCEA3-206ENST00000492271 CEP170Q5SW79 1584 aa30.7■■■□□ 2.5
TCEA3-206ENST00000492271 NUP160Q12769 1436 aa30.68■■■□□ 2.5
TCEA3-206ENST00000492271 FHAD1B1AJZ9 1412 aa30.65■■■□□ 2.5
TCEA3-206ENST00000492271 ERCC6L2Q5T890 1561 aa30.61■■■□□ 2.49
TCEA3-206ENST00000492271 SHROOM2Q13796 1616 aa30.6■■■□□ 2.49
TCEA3-206ENST00000492271 TRHP20396 242 aaPredicted RBP30.51■■■□□ 2.47
TCEA3-206ENST00000492271 RUSC2Q8N2Y8 1516 aa30.41■■■□□ 2.46
TCEA3-206ENST00000492271 CUL7Q14999 1698 aa30.3■■■□□ 2.44
TCEA3-206ENST00000492271 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
TCEA3-206ENST00000492271 KIF27Q86VH2 1401 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms