RNA–Protein interactions for RNA: ENST00000492243.1

PLD3-214, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-214ENST00000492243 NISCHQ9Y2I1 1504 aa34.4■■■■□ 3.1
PLD3-214ENST00000492243 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
PLD3-214ENST00000492243 ABCC9O60706 1549 aa29.35■■■□□ 2.29
PLD3-214ENST00000492243 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
PLD3-214ENST00000492243 DCAF1Q9Y4B6 1507 aa28.51■■■□□ 2.15
PLD3-214ENST00000492243 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
PLD3-214ENST00000492243 MYO15BQ96JP2 1530 aa28.39■■■□□ 2.14
PLD3-214ENST00000492243 NACADO15069 1562 aa28.36■■■□□ 2.13
PLD3-214ENST00000492243 DNAJC5BQ9UF47 199 aa28.24■■■□□ 2.11
PLD3-214ENST00000492243 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
PLD3-214ENST00000492243 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
PLD3-214ENST00000492243 UNC13AQ9UPW8 1703 aa27.65■■■□□ 2.02
PLD3-214ENST00000492243 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
PLD3-214ENST00000492243 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.98
PLD3-214ENST00000492243 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
PLD3-214ENST00000492243 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
PLD3-214ENST00000492243 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
PLD3-214ENST00000492243 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
PLD3-214ENST00000492243 SMARCA4P51532 1647 aa26.6■■□□□ 1.85
PLD3-214ENST00000492243 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
PLD3-214ENST00000492243 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.82
PLD3-214ENST00000492243 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
PLD3-214ENST00000492243 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.8
PLD3-214ENST00000492243 WIZO95785 1651 aa26.29■■□□□ 1.8
PLD3-214ENST00000492243 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
PLD3-214ENST00000492243 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
PLD3-214ENST00000492243 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
PLD3-214ENST00000492243 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
PLD3-214ENST00000492243 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
PLD3-214ENST00000492243 BAZ1BQ9UIG0 1483 aaKnown RBP26.09■■□□□ 1.77
PLD3-214ENST00000492243 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
PLD3-214ENST00000492243 DNAJC5Q9H3Z4 198 aa25.99■■□□□ 1.75
PLD3-214ENST00000492243 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
PLD3-214ENST00000492243 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
PLD3-214ENST00000492243 CFTRP13569 1480 aa25.4■■□□□ 1.66
PLD3-214ENST00000492243 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
PLD3-214ENST00000492243 NESP48681 1621 aa25.34■■□□□ 1.65
PLD3-214ENST00000492243 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
PLD3-214ENST00000492243 CUX2O14529 1486 aa25.21■■□□□ 1.63
PLD3-214ENST00000492243 ERCC6Q03468 1493 aa25.17■■□□□ 1.62
PLD3-214ENST00000492243 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
PLD3-214ENST00000492243 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.61
PLD3-214ENST00000492243 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
PLD3-214ENST00000492243 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
PLD3-214ENST00000492243 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
PLD3-214ENST00000492243 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
PLD3-214ENST00000492243 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.58
PLD3-214ENST00000492243 CUX1P39880 1505 aa24.86■■□□□ 1.57
PLD3-214ENST00000492243 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
PLD3-214ENST00000492243 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
PLD3-214ENST00000492243 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
PLD3-214ENST00000492243 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
PLD3-214ENST00000492243 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
PLD3-214ENST00000492243 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
PLD3-214ENST00000492243 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.56
PLD3-214ENST00000492243 WDR62O43379 1518 aa24.81■■□□□ 1.56
PLD3-214ENST00000492243 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
PLD3-214ENST00000492243 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
PLD3-214ENST00000492243 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
PLD3-214ENST00000492243 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
PLD3-214ENST00000492243 SOGA1O94964 1423 aa24.52■■□□□ 1.52
PLD3-214ENST00000492243 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
PLD3-214ENST00000492243 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
PLD3-214ENST00000492243 IFT140Q96RY7 1462 aa24.49■■□□□ 1.51
PLD3-214ENST00000492243 WDR97A6NE52 1622 aa24.49■■□□□ 1.51
PLD3-214ENST00000492243 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.51
PLD3-214ENST00000492243 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
PLD3-214ENST00000492243 ABCA5Q8WWZ7 1642 aa24.34■■□□□ 1.49
PLD3-214ENST00000492243 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
PLD3-214ENST00000492243 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
PLD3-214ENST00000492243 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
PLD3-214ENST00000492243 EEA1Q15075 1411 aa24.3■■□□□ 1.48
PLD3-214ENST00000492243 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
PLD3-214ENST00000492243 GAPVD1Q14C86 1478 aa24.27■■□□□ 1.48
PLD3-214ENST00000492243 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.471e-6■■■□□ 15.1
PLD3-214ENST00000492243 PBRM1Q86U86 1689 aa24.22■■□□□ 1.47
PLD3-214ENST00000492243 FAM9AQ8IZU1 332 aaPredicted RBP24.2■■□□□ 1.46
PLD3-214ENST00000492243 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
PLD3-214ENST00000492243 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
PLD3-214ENST00000492243 IGF1RP08069 1367 aa24.15■■□□□ 1.46
PLD3-214ENST00000492243 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
PLD3-214ENST00000492243 OSCARQ8IYS5 282 aa24.11■■□□□ 1.45
PLD3-214ENST00000492243 CUL7Q14999 1698 aa24.11■■□□□ 1.45
PLD3-214ENST00000492243 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
PLD3-214ENST00000492243 ADAMTS12P58397 1594 aa24.07■■□□□ 1.44
PLD3-214ENST00000492243 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
PLD3-214ENST00000492243 PRXQ9BXM0 1461 aa24.05■■□□□ 1.44
PLD3-214ENST00000492243 KIF21BO75037 1637 aa24.03■■□□□ 1.44
PLD3-214ENST00000492243 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
PLD3-214ENST00000492243 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
PLD3-214ENST00000492243 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
PLD3-214ENST00000492243 RAPGEF2Q9Y4G8 1499 aa23.96■■□□□ 1.43
PLD3-214ENST00000492243 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
PLD3-214ENST00000492243 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
PLD3-214ENST00000492243 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
PLD3-214ENST00000492243 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
PLD3-214ENST00000492243 GRIN2AQ12879 1464 aa23.88■■□□□ 1.41
PLD3-214ENST00000492243 CHD1O14646 1710 aa23.87■■□□□ 1.41
PLD3-214ENST00000492243 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
PLD3-214ENST00000492243 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms