RNA–Protein interactions for RNA: ENST00000492167.1

IGKV3-20-201, Transcript of immunoglobulin kappa variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGKV3-20, Length 400 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-20-201ENST00000492167 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
IGKV3-20-201ENST00000492167 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
IGKV3-20-201ENST00000492167 ABCC9O60706 1549 aa25.42■■□□□ 1.66
IGKV3-20-201ENST00000492167 RB1CC1Q8TDY2 1594 aa24.41■■□□□ 1.5
IGKV3-20-201ENST00000492167 NACADO15069 1562 aa24.33■■□□□ 1.48
IGKV3-20-201ENST00000492167 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
IGKV3-20-201ENST00000492167 MYO15BQ96JP2 1530 aa24.12■■□□□ 1.45
IGKV3-20-201ENST00000492167 UNC13AQ9UPW8 1703 aa24.08■■□□□ 1.45
IGKV3-20-201ENST00000492167 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
IGKV3-20-201ENST00000492167 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
IGKV3-20-201ENST00000492167 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
IGKV3-20-201ENST00000492167 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
IGKV3-20-201ENST00000492167 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
IGKV3-20-201ENST00000492167 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
IGKV3-20-201ENST00000492167 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
IGKV3-20-201ENST00000492167 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
IGKV3-20-201ENST00000492167 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
IGKV3-20-201ENST00000492167 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
IGKV3-20-201ENST00000492167 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
IGKV3-20-201ENST00000492167 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
IGKV3-20-201ENST00000492167 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
IGKV3-20-201ENST00000492167 SMARCA2P51531 1590 aa22.4■■□□□ 1.18
IGKV3-20-201ENST00000492167 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
IGKV3-20-201ENST00000492167 HMGXB3Q12766 1538 aa22.37■■□□□ 1.17
IGKV3-20-201ENST00000492167 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
IGKV3-20-201ENST00000492167 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
IGKV3-20-201ENST00000492167 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
IGKV3-20-201ENST00000492167 WIZO95785 1651 aa22.17■■□□□ 1.14
IGKV3-20-201ENST00000492167 NESP48681 1621 aa21.99■■□□□ 1.11
IGKV3-20-201ENST00000492167 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
IGKV3-20-201ENST00000492167 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
IGKV3-20-201ENST00000492167 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
IGKV3-20-201ENST00000492167 ERCC6Q03468 1493 aa21.88■■□□□ 1.09
IGKV3-20-201ENST00000492167 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
IGKV3-20-201ENST00000492167 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
IGKV3-20-201ENST00000492167 CUX2O14529 1486 aa21.73■■□□□ 1.07
IGKV3-20-201ENST00000492167 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
IGKV3-20-201ENST00000492167 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
IGKV3-20-201ENST00000492167 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
IGKV3-20-201ENST00000492167 CFTRP13569 1480 aa21.59■■□□□ 1.05
IGKV3-20-201ENST00000492167 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
IGKV3-20-201ENST00000492167 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
IGKV3-20-201ENST00000492167 WDR62O43379 1518 aa21.52■■□□□ 1.04
IGKV3-20-201ENST00000492167 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.03
IGKV3-20-201ENST00000492167 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.03
IGKV3-20-201ENST00000492167 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
IGKV3-20-201ENST00000492167 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
IGKV3-20-201ENST00000492167 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
IGKV3-20-201ENST00000492167 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
IGKV3-20-201ENST00000492167 DNAJC5Q9H3Z4 198 aa21.12■□□□□ 0.97
IGKV3-20-201ENST00000492167 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
IGKV3-20-201ENST00000492167 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
IGKV3-20-201ENST00000492167 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
IGKV3-20-201ENST00000492167 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
IGKV3-20-201ENST00000492167 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
IGKV3-20-201ENST00000492167 CUX1P39880 1505 aa21■□□□□ 0.95
IGKV3-20-201ENST00000492167 POLA1P09884 1462 aaPredicted RBP21■□□□□ 0.95
IGKV3-20-201ENST00000492167 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
IGKV3-20-201ENST00000492167 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
IGKV3-20-201ENST00000492167 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
IGKV3-20-201ENST00000492167 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
IGKV3-20-201ENST00000492167 CHD1O14646 1710 aa20.84■□□□□ 0.93
IGKV3-20-201ENST00000492167 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
IGKV3-20-201ENST00000492167 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
IGKV3-20-201ENST00000492167 SOGA1O94964 1423 aa20.79■□□□□ 0.92
IGKV3-20-201ENST00000492167 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
IGKV3-20-201ENST00000492167 PBRM1Q86U86 1689 aa20.78■□□□□ 0.92
IGKV3-20-201ENST00000492167 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
IGKV3-20-201ENST00000492167 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
IGKV3-20-201ENST00000492167 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
IGKV3-20-201ENST00000492167 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
IGKV3-20-201ENST00000492167 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
IGKV3-20-201ENST00000492167 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
IGKV3-20-201ENST00000492167 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
IGKV3-20-201ENST00000492167 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
IGKV3-20-201ENST00000492167 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
IGKV3-20-201ENST00000492167 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
IGKV3-20-201ENST00000492167 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
IGKV3-20-201ENST00000492167 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
IGKV3-20-201ENST00000492167 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
IGKV3-20-201ENST00000492167 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
IGKV3-20-201ENST00000492167 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
IGKV3-20-201ENST00000492167 ARHGEF11O15085 1522 aa20.52■□□□□ 0.87
IGKV3-20-201ENST00000492167 FBLN2P98095 1184 aa20.46■□□□□ 0.87
IGKV3-20-201ENST00000492167 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
IGKV3-20-201ENST00000492167 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
IGKV3-20-201ENST00000492167 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
IGKV3-20-201ENST00000492167 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
IGKV3-20-201ENST00000492167 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
IGKV3-20-201ENST00000492167 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
IGKV3-20-201ENST00000492167 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
IGKV3-20-201ENST00000492167 NUP160Q12769 1436 aa20.31■□□□□ 0.84
IGKV3-20-201ENST00000492167 CUL7Q14999 1698 aa20.3■□□□□ 0.84
IGKV3-20-201ENST00000492167 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
IGKV3-20-201ENST00000492167 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
IGKV3-20-201ENST00000492167 KIF27Q86VH2 1401 aa20.25■□□□□ 0.83
IGKV3-20-201ENST00000492167 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
IGKV3-20-201ENST00000492167 IGF1RP08069 1367 aa20.17■□□□□ 0.82
IGKV3-20-201ENST00000492167 CYB5RLQ6IPT4 315 aa20.14■□□□□ 0.81
IGKV3-20-201ENST00000492167 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms