RNA–Protein interactions for RNA: ENST00000492095.5

NECAP2-206, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-206ENST00000492095 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
NECAP2-206ENST00000492095 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
NECAP2-206ENST00000492095 ABCC9O60706 1549 aa26.65■■□□□ 1.86
NECAP2-206ENST00000492095 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
NECAP2-206ENST00000492095 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
NECAP2-206ENST00000492095 DCAF8L2P0C7V8 631 aa25.34■■□□□ 1.65
NECAP2-206ENST00000492095 NACADO15069 1562 aa25.31■■□□□ 1.64
NECAP2-206ENST00000492095 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
NECAP2-206ENST00000492095 MYO15BQ96JP2 1530 aa25.03■■□□□ 1.6
NECAP2-206ENST00000492095 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
NECAP2-206ENST00000492095 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
NECAP2-206ENST00000492095 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
NECAP2-206ENST00000492095 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
NECAP2-206ENST00000492095 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
NECAP2-206ENST00000492095 SHROOM4Q9ULL8 1493 aa24.47■■□□□ 1.51
NECAP2-206ENST00000492095 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
NECAP2-206ENST00000492095 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.44
NECAP2-206ENST00000492095 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
NECAP2-206ENST00000492095 SMARCA4P51532 1647 aa23.58■■□□□ 1.36
NECAP2-206ENST00000492095 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
NECAP2-206ENST00000492095 BAZ1AQ9NRL2 1556 aaPredicted RBP23.52■■□□□ 1.36
NECAP2-206ENST00000492095 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.34
NECAP2-206ENST00000492095 WIZO95785 1651 aa23.38■■□□□ 1.33
NECAP2-206ENST00000492095 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
NECAP2-206ENST00000492095 ATAD2BQ9ULI0 1458 aa23.34■■□□□ 1.33
NECAP2-206ENST00000492095 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
NECAP2-206ENST00000492095 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
NECAP2-206ENST00000492095 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
NECAP2-206ENST00000492095 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
NECAP2-206ENST00000492095 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
NECAP2-206ENST00000492095 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
NECAP2-206ENST00000492095 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
NECAP2-206ENST00000492095 NESP48681 1621 aa22.97■■□□□ 1.27
NECAP2-206ENST00000492095 CUX2O14529 1486 aa22.83■■□□□ 1.25
NECAP2-206ENST00000492095 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
NECAP2-206ENST00000492095 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
NECAP2-206ENST00000492095 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
NECAP2-206ENST00000492095 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
NECAP2-206ENST00000492095 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
NECAP2-206ENST00000492095 PDS5BQ9NTI5 1447 aa22.66■■□□□ 1.22
NECAP2-206ENST00000492095 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
NECAP2-206ENST00000492095 CFTRP13569 1480 aa22.51■■□□□ 1.19
NECAP2-206ENST00000492095 MRC2Q9UBG0 1479 aa22.46■■□□□ 1.19
NECAP2-206ENST00000492095 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
NECAP2-206ENST00000492095 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
NECAP2-206ENST00000492095 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
NECAP2-206ENST00000492095 WDR62O43379 1518 aa22.41■■□□□ 1.18
NECAP2-206ENST00000492095 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
NECAP2-206ENST00000492095 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
NECAP2-206ENST00000492095 CUX1P39880 1505 aa22.07■■□□□ 1.12
NECAP2-206ENST00000492095 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
NECAP2-206ENST00000492095 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
NECAP2-206ENST00000492095 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
NECAP2-206ENST00000492095 WRNQ14191 1432 aaPredicted RBP eCLIP21.99■■□□□ 1.112e-6■■■■□ 22.3
NECAP2-206ENST00000492095 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
NECAP2-206ENST00000492095 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
NECAP2-206ENST00000492095 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
NECAP2-206ENST00000492095 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
NECAP2-206ENST00000492095 FGD5Q6ZNL6 1462 aa21.89■■□□□ 1.1
NECAP2-206ENST00000492095 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
NECAP2-206ENST00000492095 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
NECAP2-206ENST00000492095 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
NECAP2-206ENST00000492095 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
NECAP2-206ENST00000492095 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
NECAP2-206ENST00000492095 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
NECAP2-206ENST00000492095 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
NECAP2-206ENST00000492095 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.073e-7■■■■□ 19.8
NECAP2-206ENST00000492095 SOGA1O94964 1423 aa21.76■■□□□ 1.07
NECAP2-206ENST00000492095 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
NECAP2-206ENST00000492095 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
NECAP2-206ENST00000492095 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.06
NECAP2-206ENST00000492095 CHD1O14646 1710 aa21.61■■□□□ 1.05
NECAP2-206ENST00000492095 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
NECAP2-206ENST00000492095 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
NECAP2-206ENST00000492095 FBLN2P98095 1184 aa21.56■■□□□ 1.04
NECAP2-206ENST00000492095 RIMBP3CA6NJZ7 1639 aa21.56■■□□□ 1.04
NECAP2-206ENST00000492095 RIMBP3BA6NNM3 1639 aa21.56■■□□□ 1.04
NECAP2-206ENST00000492095 RIMBP3Q9UFD9 1639 aa21.56■■□□□ 1.04
NECAP2-206ENST00000492095 SNAPC4Q5SXM2 1469 aa21.55■■□□□ 1.04
NECAP2-206ENST00000492095 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
NECAP2-206ENST00000492095 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
NECAP2-206ENST00000492095 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
NECAP2-206ENST00000492095 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
NECAP2-206ENST00000492095 MAGI1Q96QZ7 1491 aaPredicted RBP21.47■■□□□ 1.03
NECAP2-206ENST00000492095 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
NECAP2-206ENST00000492095 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
NECAP2-206ENST00000492095 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
NECAP2-206ENST00000492095 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
NECAP2-206ENST00000492095 IGF1RP08069 1367 aa21.39■■□□□ 1.02
NECAP2-206ENST00000492095 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
NECAP2-206ENST00000492095 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
NECAP2-206ENST00000492095 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
NECAP2-206ENST00000492095 ADAMTS12P58397 1594 aa21.33■■□□□ 1
NECAP2-206ENST00000492095 ARAP1Q96P48 1450 aa21.32■■□□□ 1
NECAP2-206ENST00000492095 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
NECAP2-206ENST00000492095 CUL7Q14999 1698 aa21.26■□□□□ 0.99
NECAP2-206ENST00000492095 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
NECAP2-206ENST00000492095 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
NECAP2-206ENST00000492095 EEA1Q15075 1411 aa21.23■□□□□ 0.99
NECAP2-206ENST00000492095 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms