RNA–Protein interactions for RNA: ENST00000492087.1

MTMR3-211, Transcript of myotubularin related protein 3, humanhuman

TSL 2

Gene MTMR3, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-211ENST00000492087 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
MTMR3-211ENST00000492087 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
MTMR3-211ENST00000492087 ABCC9O60706 1549 aa21.62■■□□□ 1.05
MTMR3-211ENST00000492087 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
MTMR3-211ENST00000492087 NACADO15069 1562 aa20.7■□□□□ 0.9
MTMR3-211ENST00000492087 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
MTMR3-211ENST00000492087 DCAF8L2P0C7V8 631 aa20.4■□□□□ 0.86
MTMR3-211ENST00000492087 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
MTMR3-211ENST00000492087 DCAF1Q9Y4B6 1507 aa20.35■□□□□ 0.85
MTMR3-211ENST00000492087 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
MTMR3-211ENST00000492087 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
MTMR3-211ENST00000492087 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
MTMR3-211ENST00000492087 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
MTMR3-211ENST00000492087 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
MTMR3-211ENST00000492087 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
MTMR3-211ENST00000492087 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
MTMR3-211ENST00000492087 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
MTMR3-211ENST00000492087 CECR2Q9BXF3 1484 aa19.49■□□□□ 0.71
MTMR3-211ENST00000492087 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
MTMR3-211ENST00000492087 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
MTMR3-211ENST00000492087 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
MTMR3-211ENST00000492087 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
MTMR3-211ENST00000492087 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
MTMR3-211ENST00000492087 HMGXB3Q12766 1538 aa19■□□□□ 0.63
MTMR3-211ENST00000492087 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
MTMR3-211ENST00000492087 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
MTMR3-211ENST00000492087 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
MTMR3-211ENST00000492087 WIZO95785 1651 aa18.66■□□□□ 0.58
MTMR3-211ENST00000492087 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
MTMR3-211ENST00000492087 NESP48681 1621 aa18.65■□□□□ 0.58
MTMR3-211ENST00000492087 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
MTMR3-211ENST00000492087 CUX2O14529 1486 aa18.63■□□□□ 0.57
MTMR3-211ENST00000492087 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
MTMR3-211ENST00000492087 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
MTMR3-211ENST00000492087 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
MTMR3-211ENST00000492087 CADPSQ9ULU8 1353 aa18.48■□□□□ 0.55
MTMR3-211ENST00000492087 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
MTMR3-211ENST00000492087 PDS5BQ9NTI5 1447 aa18.48■□□□□ 0.55
MTMR3-211ENST00000492087 CFTRP13569 1480 aa18.34■□□□□ 0.53
MTMR3-211ENST00000492087 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
MTMR3-211ENST00000492087 WDR62O43379 1518 aa18.3■□□□□ 0.52
MTMR3-211ENST00000492087 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
MTMR3-211ENST00000492087 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
MTMR3-211ENST00000492087 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
MTMR3-211ENST00000492087 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
MTMR3-211ENST00000492087 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
MTMR3-211ENST00000492087 URB2Q14146 1524 aaKnown RBP18.12■□□□□ 0.49
MTMR3-211ENST00000492087 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
MTMR3-211ENST00000492087 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
MTMR3-211ENST00000492087 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
MTMR3-211ENST00000492087 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
MTMR3-211ENST00000492087 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
MTMR3-211ENST00000492087 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.45
MTMR3-211ENST00000492087 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.44
MTMR3-211ENST00000492087 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
MTMR3-211ENST00000492087 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
MTMR3-211ENST00000492087 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
MTMR3-211ENST00000492087 CUX1P39880 1505 aa17.72■□□□□ 0.43
MTMR3-211ENST00000492087 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
MTMR3-211ENST00000492087 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
MTMR3-211ENST00000492087 AQRO60306 1485 aaKnown RBP eCLIP17.68■□□□□ 0.42
MTMR3-211ENST00000492087 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
MTMR3-211ENST00000492087 SOGA1O94964 1423 aa17.67■□□□□ 0.42
MTMR3-211ENST00000492087 CHD1O14646 1710 aa17.62■□□□□ 0.41
MTMR3-211ENST00000492087 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
MTMR3-211ENST00000492087 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
MTMR3-211ENST00000492087 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
MTMR3-211ENST00000492087 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
MTMR3-211ENST00000492087 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
MTMR3-211ENST00000492087 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
MTMR3-211ENST00000492087 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
MTMR3-211ENST00000492087 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
MTMR3-211ENST00000492087 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
MTMR3-211ENST00000492087 SNAPC4Q5SXM2 1469 aa17.53■□□□□ 0.4
MTMR3-211ENST00000492087 ABCA5Q8WWZ7 1642 aa17.52■□□□□ 0.4
MTMR3-211ENST00000492087 PBRM1Q86U86 1689 aa17.52■□□□□ 0.39
MTMR3-211ENST00000492087 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
MTMR3-211ENST00000492087 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
MTMR3-211ENST00000492087 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
MTMR3-211ENST00000492087 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
MTMR3-211ENST00000492087 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
MTMR3-211ENST00000492087 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
MTMR3-211ENST00000492087 CLASP1Q7Z460 1538 aa17.44■□□□□ 0.38
MTMR3-211ENST00000492087 FBLN2P98095 1184 aa17.43■□□□□ 0.38
MTMR3-211ENST00000492087 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
MTMR3-211ENST00000492087 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
MTMR3-211ENST00000492087 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
MTMR3-211ENST00000492087 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
MTMR3-211ENST00000492087 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
MTMR3-211ENST00000492087 FHAD1B1AJZ9 1412 aa17.29■□□□□ 0.36
MTMR3-211ENST00000492087 NUP160Q12769 1436 aa17.27■□□□□ 0.35
MTMR3-211ENST00000492087 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
MTMR3-211ENST00000492087 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
MTMR3-211ENST00000492087 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
MTMR3-211ENST00000492087 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
MTMR3-211ENST00000492087 CUL7Q14999 1698 aa17.14■□□□□ 0.33
MTMR3-211ENST00000492087 ERCC6L2Q5T890 1561 aa17.13■□□□□ 0.33
MTMR3-211ENST00000492087 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
MTMR3-211ENST00000492087 IGF1RP08069 1367 aa17.11■□□□□ 0.33
MTMR3-211ENST00000492087 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms