RNA–Protein interactions for RNA: ENST00000492046.1

PTRHD1-206, Transcript of peptidyl-tRNA hydrolase domain containing 1, humanhuman

TSL 3

Gene PTRHD1, Length 541 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRHD1-206ENST00000492046 NISCHQ9Y2I1 1504 aa47.39■■■■■ 5.18
PTRHD1-206ENST00000492046 CCDC180Q9P1Z9 1646 aa42.57■■■■■ 4.4
PTRHD1-206ENST00000492046 ABCC9O60706 1549 aa42.39■■■■■ 4.38
PTRHD1-206ENST00000492046 RB1CC1Q8TDY2 1594 aa40.44■■■■■ 4.06
PTRHD1-206ENST00000492046 NACADO15069 1562 aa40.2■■■■■ 4.03
PTRHD1-206ENST00000492046 DNAJC5BQ9UF47 199 aa39.79■■■■□ 3.96
PTRHD1-206ENST00000492046 MYO15BQ96JP2 1530 aa39.74■■■■□ 3.95
PTRHD1-206ENST00000492046 DCAF8L2P0C7V8 631 aa39.7■■■■□ 3.95
PTRHD1-206ENST00000492046 UNC13AQ9UPW8 1703 aa39.58■■■■□ 3.93
PTRHD1-206ENST00000492046 PABPN1Q86U42 306 aaKnown RBP eCLIP39.41■■■■□ 3.9
PTRHD1-206ENST00000492046 BICRAQ9NZM4 1560 aa39.33■■■■□ 3.89
PTRHD1-206ENST00000492046 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
PTRHD1-206ENST00000492046 DCAF1Q9Y4B6 1507 aa39.23■■■■□ 3.87
PTRHD1-206ENST00000492046 SHROOM4Q9ULL8 1493 aa38.83■■■■□ 3.81
PTRHD1-206ENST00000492046 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
PTRHD1-206ENST00000492046 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
PTRHD1-206ENST00000492046 EIF4G1Q04637 1599 aaKnown RBP38.31■■■■□ 3.72
PTRHD1-206ENST00000492046 CECR2Q9BXF3 1484 aa38.21■■■■□ 3.71
PTRHD1-206ENST00000492046 NCAPD3P42695 1498 aa37.13■■■■□ 3.53
PTRHD1-206ENST00000492046 ATAD2BQ9ULI0 1458 aa36.99■■■■□ 3.51
PTRHD1-206ENST00000492046 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
PTRHD1-206ENST00000492046 SMARCA2P51531 1590 aa36.87■■■■□ 3.49
PTRHD1-206ENST00000492046 HMGXB3Q12766 1538 aa36.87■■■■□ 3.49
PTRHD1-206ENST00000492046 BAZ1AQ9NRL2 1556 aaPredicted RBP36.77■■■■□ 3.48
PTRHD1-206ENST00000492046 PEG3Q9GZU2 1588 aa36.69■■■■□ 3.46
PTRHD1-206ENST00000492046 CUX2O14529 1486 aa36.61■■■■□ 3.45
PTRHD1-206ENST00000492046 BAZ1BQ9UIG0 1483 aaKnown RBP36.57■■■■□ 3.45
PTRHD1-206ENST00000492046 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
PTRHD1-206ENST00000492046 DNAJC5Q9H3Z4 198 aa36.5■■■■□ 3.43
PTRHD1-206ENST00000492046 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
PTRHD1-206ENST00000492046 NESP48681 1621 aa36.46■■■■□ 3.43
PTRHD1-206ENST00000492046 LAMC3Q9Y6N6 1575 aa36.27■■■■□ 3.4
PTRHD1-206ENST00000492046 THOC2Q8NI27 1593 aaKnown RBP36.17■■■■□ 3.38
PTRHD1-206ENST00000492046 WIZO95785 1651 aa36.05■■■■□ 3.36
PTRHD1-206ENST00000492046 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
PTRHD1-206ENST00000492046 PDS5BQ9NTI5 1447 aa35.99■■■■□ 3.35
PTRHD1-206ENST00000492046 CADPSQ9ULU8 1353 aa35.94■■■■□ 3.34
PTRHD1-206ENST00000492046 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
PTRHD1-206ENST00000492046 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
PTRHD1-206ENST00000492046 WDR62O43379 1518 aa35.67■■■■□ 3.3
PTRHD1-206ENST00000492046 TOP2AP11388 1531 aaKnown RBP35.62■■■■□ 3.29
PTRHD1-206ENST00000492046 CFTRP13569 1480 aa35.58■■■■□ 3.29
PTRHD1-206ENST00000492046 CEP164Q9UPV0 1460 aa35.54■■■■□ 3.28
PTRHD1-206ENST00000492046 FANCD2Q9BXW9 1451 aa35.52■■■■□ 3.28
PTRHD1-206ENST00000492046 URB2Q14146 1524 aaKnown RBP35.26■■■■□ 3.23
PTRHD1-206ENST00000492046 PRDM2Q13029 1718 aa35.26■■■■□ 3.23
PTRHD1-206ENST00000492046 CCDC88BA6NC98 1476 aa35.19■■■■□ 3.22
PTRHD1-206ENST00000492046 TOPBP1Q92547 1522 aa34.87■■■■□ 3.17
PTRHD1-206ENST00000492046 IFT140Q96RY7 1462 aa34.85■■■■□ 3.17
PTRHD1-206ENST00000492046 OSCARQ8IYS5 282 aa34.82■■■■□ 3.16
PTRHD1-206ENST00000492046 ABCC8Q09428 1581 aa34.8■■■■□ 3.16
PTRHD1-206ENST00000492046 ZNF608Q9ULD9 1512 aaPredicted RBP34.79■■■■□ 3.16
PTRHD1-206ENST00000492046 DNMBPQ6XZF7 1577 aa34.76■■■■□ 3.16
PTRHD1-206ENST00000492046 TRIM41Q8WV44 630 aa34.76■■■■□ 3.16
PTRHD1-206ENST00000492046 EIF4G3O43432 1585 aaKnown RBP34.63■■■■□ 3.13
PTRHD1-206ENST00000492046 TARBP1Q13395 1621 aaKnown RBP34.62■■■■□ 3.13
PTRHD1-206ENST00000492046 POLA1P09884 1462 aaPredicted RBP34.52■■■■□ 3.12
PTRHD1-206ENST00000492046 RIMBP3CA6NJZ7 1639 aa34.46■■■■□ 3.11
PTRHD1-206ENST00000492046 RIMBP3BA6NNM3 1639 aa34.46■■■■□ 3.11
PTRHD1-206ENST00000492046 RIMBP3Q9UFD9 1639 aa34.46■■■■□ 3.11
PTRHD1-206ENST00000492046 AQRO60306 1485 aaKnown RBP eCLIP34.45■■■■□ 3.1
PTRHD1-206ENST00000492046 CHD1O14646 1710 aa34.35■■■■□ 3.09
PTRHD1-206ENST00000492046 ARHGEF11O15085 1522 aa34.35■■■■□ 3.09
PTRHD1-206ENST00000492046 RAD54L2Q9Y4B4 1467 aa34.35■■■■□ 3.09
PTRHD1-206ENST00000492046 SOGA1O94964 1423 aa34.3■■■■□ 3.08
PTRHD1-206ENST00000492046 CUX1P39880 1505 aa34.3■■■■□ 3.08
PTRHD1-206ENST00000492046 WDR97A6NE52 1622 aa34.29■■■■□ 3.08
PTRHD1-206ENST00000492046 FGD5Q6ZNL6 1462 aa34.28■■■■□ 3.08
PTRHD1-206ENST00000492046 TDRD9Q8NDG6 1382 aaKnown RBP34.22■■■■□ 3.07
PTRHD1-206ENST00000492046 SNAPC4Q5SXM2 1469 aa34.12■■■■□ 3.05
PTRHD1-206ENST00000492046 FBLN2P98095 1184 aa34.07■■■■□ 3.04
PTRHD1-206ENST00000492046 MAGI1Q96QZ7 1491 aaPredicted RBP34.07■■■■□ 3.04
PTRHD1-206ENST00000492046 GRIN2BQ13224 1484 aa34.04■■■■□ 3.04
PTRHD1-206ENST00000492046 ARAP1Q96P48 1450 aa34.03■■■■□ 3.04
PTRHD1-206ENST00000492046 CLASP1Q7Z460 1538 aa34.02■■■■□ 3.04
PTRHD1-206ENST00000492046 SUPT5HO00267 1087 aaKnown RBP33.97■■■■□ 3.03
PTRHD1-206ENST00000492046 CYB5RLQ6IPT4 315 aa33.97■■■■□ 3.03
PTRHD1-206ENST00000492046 ABCA10Q8WWZ4 1543 aa33.94■■■■□ 3.02
PTRHD1-206ENST00000492046 PBRM1Q86U86 1689 aa33.94■■■■□ 3.02
PTRHD1-206ENST00000492046 SYNJ2O15056 1496 aa33.94■■■■□ 3.02
PTRHD1-206ENST00000492046 SYNJ1O43426 1573 aa33.93■■■■□ 3.02
PTRHD1-206ENST00000492046 ABCA5Q8WWZ7 1642 aa33.92■■■■□ 3.02
PTRHD1-206ENST00000492046 GAPVD1Q14C86 1478 aa33.91■■■■□ 3.02
PTRHD1-206ENST00000492046 CHMP7Q8WUX9 453 aaPredicted RBP33.89■■■■□ 3.02
PTRHD1-206ENST00000492046 BIVM-ERCC5R4GMW8 1640 aa33.79■■■■□ 3
PTRHD1-206ENST00000492046 TOP2BQ02880 1626 aa33.76■■■■□ 3
PTRHD1-206ENST00000492046 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
PTRHD1-206ENST00000492046 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
PTRHD1-206ENST00000492046 GRIN2AQ12879 1464 aa33.62■■■□□ 2.97
PTRHD1-206ENST00000492046 NUP160Q12769 1436 aa33.54■■■□□ 2.96
PTRHD1-206ENST00000492046 CEP170Q5SW79 1584 aa33.52■■■□□ 2.96
PTRHD1-206ENST00000492046 ERICH3Q5RHP9 1530 aa33.52■■■□□ 2.96
PTRHD1-206ENST00000492046 TRHP20396 242 aaPredicted RBP33.51■■■□□ 2.95
PTRHD1-206ENST00000492046 FHAD1B1AJZ9 1412 aa33.49■■■□□ 2.95
PTRHD1-206ENST00000492046 ERCC6L2Q5T890 1561 aa33.44■■■□□ 2.94
PTRHD1-206ENST00000492046 SHROOM2Q13796 1616 aa33.43■■■□□ 2.94
PTRHD1-206ENST00000492046 RUSC2Q8N2Y8 1516 aa33.17■■■□□ 2.9
PTRHD1-206ENST00000492046 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
PTRHD1-206ENST00000492046 JPH4Q96JJ6 628 aa33.09■■■□□ 2.89
PTRHD1-206ENST00000492046 IGF1RP08069 1367 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms