RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
TOM1-215ENST00000491987 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
TOM1-215ENST00000491987 ABCC9O60706 1549 aa32.77■■■□□ 2.84
TOM1-215ENST00000491987 RB1CC1Q8TDY2 1594 aa31.32■■■□□ 2.6
TOM1-215ENST00000491987 NACADO15069 1562 aa31.18■■■□□ 2.58
TOM1-215ENST00000491987 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
TOM1-215ENST00000491987 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
TOM1-215ENST00000491987 ZCCHC6Q5VYS8 1495 aaKnown RBP30.8■■■□□ 2.52
TOM1-215ENST00000491987 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
TOM1-215ENST00000491987 DCAF1Q9Y4B6 1507 aa30.61■■■□□ 2.49
TOM1-215ENST00000491987 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
TOM1-215ENST00000491987 BICRAQ9NZM4 1560 aa30.4■■■□□ 2.46
TOM1-215ENST00000491987 DNAJC5BQ9UF47 199 aa30.36■■■□□ 2.45
TOM1-215ENST00000491987 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
TOM1-215ENST00000491987 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
TOM1-215ENST00000491987 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
TOM1-215ENST00000491987 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
TOM1-215ENST00000491987 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
TOM1-215ENST00000491987 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
TOM1-215ENST00000491987 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
TOM1-215ENST00000491987 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
TOM1-215ENST00000491987 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
TOM1-215ENST00000491987 SMARCA2P51531 1590 aa28.7■■■□□ 2.18
TOM1-215ENST00000491987 HMGXB3Q12766 1538 aa28.62■■■□□ 2.17
TOM1-215ENST00000491987 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
TOM1-215ENST00000491987 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
TOM1-215ENST00000491987 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
TOM1-215ENST00000491987 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
TOM1-215ENST00000491987 WIZO95785 1651 aa28.25■■■□□ 2.11
TOM1-215ENST00000491987 NESP48681 1621 aa28.25■■■□□ 2.11
TOM1-215ENST00000491987 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
TOM1-215ENST00000491987 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
TOM1-215ENST00000491987 CUX2O14529 1486 aa28.05■■■□□ 2.08
TOM1-215ENST00000491987 CADPSQ9ULU8 1353 aa27.92■■■□□ 2.06
TOM1-215ENST00000491987 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
TOM1-215ENST00000491987 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
TOM1-215ENST00000491987 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
TOM1-215ENST00000491987 THOC2Q8NI27 1593 aaKnown RBP27.89■■■□□ 2.05
TOM1-215ENST00000491987 CFTRP13569 1480 aa27.69■■■□□ 2.02
TOM1-215ENST00000491987 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
TOM1-215ENST00000491987 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
TOM1-215ENST00000491987 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
TOM1-215ENST00000491987 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
TOM1-215ENST00000491987 CCDC88BA6NC98 1476 aa27.58■■■□□ 2.01
TOM1-215ENST00000491987 WDR62O43379 1518 aa27.58■■■□□ 2.01
TOM1-215ENST00000491987 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
TOM1-215ENST00000491987 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
TOM1-215ENST00000491987 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
TOM1-215ENST00000491987 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
TOM1-215ENST00000491987 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
TOM1-215ENST00000491987 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
TOM1-215ENST00000491987 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
TOM1-215ENST00000491987 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
TOM1-215ENST00000491987 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
TOM1-215ENST00000491987 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
TOM1-215ENST00000491987 EIF4G3O43432 1585 aaKnown RBP26.88■■□□□ 1.89
TOM1-215ENST00000491987 CUX1P39880 1505 aa26.81■■□□□ 1.88
TOM1-215ENST00000491987 OSCARQ8IYS5 282 aa26.81■■□□□ 1.88
TOM1-215ENST00000491987 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
TOM1-215ENST00000491987 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
TOM1-215ENST00000491987 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.883e-6■■■□□ 15.4
TOM1-215ENST00000491987 SOGA1O94964 1423 aa26.77■■□□□ 1.88
TOM1-215ENST00000491987 TDRD9Q8NDG6 1382 aaKnown RBP26.68■■□□□ 1.86
TOM1-215ENST00000491987 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
TOM1-215ENST00000491987 CHD1O14646 1710 aa26.59■■□□□ 1.85
TOM1-215ENST00000491987 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
TOM1-215ENST00000491987 FBLN2P98095 1184 aa26.54■■□□□ 1.84
TOM1-215ENST00000491987 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
TOM1-215ENST00000491987 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
TOM1-215ENST00000491987 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
TOM1-215ENST00000491987 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
TOM1-215ENST00000491987 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
TOM1-215ENST00000491987 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
TOM1-215ENST00000491987 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
TOM1-215ENST00000491987 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
TOM1-215ENST00000491987 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
TOM1-215ENST00000491987 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
TOM1-215ENST00000491987 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
TOM1-215ENST00000491987 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
TOM1-215ENST00000491987 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
TOM1-215ENST00000491987 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
TOM1-215ENST00000491987 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
TOM1-215ENST00000491987 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
TOM1-215ENST00000491987 SYNJ2O15056 1496 aa26.37■■□□□ 1.81
TOM1-215ENST00000491987 CLASP1Q7Z460 1538 aa26.29■■□□□ 1.8
TOM1-215ENST00000491987 ADAMTS12P58397 1594 aa26.21■■□□□ 1.79
TOM1-215ENST00000491987 ARAP1Q96P48 1450 aa26.19■■□□□ 1.78
TOM1-215ENST00000491987 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
TOM1-215ENST00000491987 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
TOM1-215ENST00000491987 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
TOM1-215ENST00000491987 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
TOM1-215ENST00000491987 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
TOM1-215ENST00000491987 NUP160Q12769 1436 aa26.05■■□□□ 1.76
TOM1-215ENST00000491987 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
TOM1-215ENST00000491987 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
TOM1-215ENST00000491987 SHROOM2Q13796 1616 aa25.9■■□□□ 1.74
TOM1-215ENST00000491987 IGF1RP08069 1367 aa25.9■■□□□ 1.74
TOM1-215ENST00000491987 CUL7Q14999 1698 aa25.87■■□□□ 1.73
TOM1-215ENST00000491987 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
TOM1-215ENST00000491987 TRHP20396 242 aaPredicted RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms