RNA–Protein interactions for RNA: ENST00000491798.1

C3orf58-204, Transcript of chromosome 3 open reading frame 58, humanhuman

TSL 5

Gene C3orf58, Length 416 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58-204ENST00000491798 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
C3orf58-204ENST00000491798 CCDC180Q9P1Z9 1646 aa36.83■■■■□ 3.49
C3orf58-204ENST00000491798 ABCC9O60706 1549 aa36.76■■■■□ 3.48
C3orf58-204ENST00000491798 RB1CC1Q8TDY2 1594 aa34.98■■■■□ 3.19
C3orf58-204ENST00000491798 NACADO15069 1562 aa34.78■■■■□ 3.16
C3orf58-204ENST00000491798 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
C3orf58-204ENST00000491798 DNAJC5BQ9UF47 199 aa34.36■■■■□ 3.09
C3orf58-204ENST00000491798 MYO15BQ96JP2 1530 aa34.33■■■■□ 3.09
C3orf58-204ENST00000491798 PABPN1Q86U42 306 aaKnown RBP eCLIP34.27■■■■□ 3.08
C3orf58-204ENST00000491798 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
C3orf58-204ENST00000491798 ZCCHC6Q5VYS8 1495 aaKnown RBP34.19■■■■□ 3.06
C3orf58-204ENST00000491798 BICRAQ9NZM4 1560 aa34.04■■■■□ 3.04
C3orf58-204ENST00000491798 DCAF1Q9Y4B6 1507 aa33.98■■■■□ 3.03
C3orf58-204ENST00000491798 SCRIBQ14160 1630 aa33.67■■■□□ 2.98
C3orf58-204ENST00000491798 SHROOM4Q9ULL8 1493 aa33.46■■■□□ 2.95
C3orf58-204ENST00000491798 CC2D2AQ9P2K1 1620 aa33.19■■■□□ 2.9
C3orf58-204ENST00000491798 EIF4G1Q04637 1599 aaKnown RBP33.15■■■□□ 2.9
C3orf58-204ENST00000491798 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
C3orf58-204ENST00000491798 NCAPD3P42695 1498 aa32.12■■■□□ 2.73
C3orf58-204ENST00000491798 SMARCA4P51532 1647 aa32.1■■■□□ 2.73
C3orf58-204ENST00000491798 ATAD2BQ9ULI0 1458 aa32.09■■■□□ 2.73
C3orf58-204ENST00000491798 SMARCA2P51531 1590 aa31.95■■■□□ 2.71
C3orf58-204ENST00000491798 BAZ1AQ9NRL2 1556 aaPredicted RBP31.92■■■□□ 2.7
C3orf58-204ENST00000491798 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
C3orf58-204ENST00000491798 MROH2BQ7Z745 1585 aa31.78■■■□□ 2.68
C3orf58-204ENST00000491798 BAZ1BQ9UIG0 1483 aaKnown RBP31.77■■■□□ 2.68
C3orf58-204ENST00000491798 PEG3Q9GZU2 1588 aa31.75■■■□□ 2.67
C3orf58-204ENST00000491798 ERCC6Q03468 1493 aa31.67■■■□□ 2.66
C3orf58-204ENST00000491798 NESP48681 1621 aa31.65■■■□□ 2.66
C3orf58-204ENST00000491798 CUX2O14529 1486 aa31.52■■■□□ 2.64
C3orf58-204ENST00000491798 WIZO95785 1651 aa31.41■■■□□ 2.62
C3orf58-204ENST00000491798 LAMC3Q9Y6N6 1575 aa31.35■■■□□ 2.61
C3orf58-204ENST00000491798 DNAJC5Q9H3Z4 198 aa31.32■■■□□ 2.6
C3orf58-204ENST00000491798 THOC2Q8NI27 1593 aaKnown RBP31.26■■■□□ 2.59
C3orf58-204ENST00000491798 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
C3orf58-204ENST00000491798 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
C3orf58-204ENST00000491798 CADPSQ9ULU8 1353 aa31.16■■■□□ 2.58
C3orf58-204ENST00000491798 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
C3orf58-204ENST00000491798 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
C3orf58-204ENST00000491798 MRC2Q9UBG0 1479 aa30.92■■■□□ 2.54
C3orf58-204ENST00000491798 CFTRP13569 1480 aa30.86■■■□□ 2.53
C3orf58-204ENST00000491798 WDR62O43379 1518 aa30.85■■■□□ 2.53
C3orf58-204ENST00000491798 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
C3orf58-204ENST00000491798 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.53
C3orf58-204ENST00000491798 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
C3orf58-204ENST00000491798 URB2Q14146 1524 aaKnown RBP30.6■■■□□ 2.49
C3orf58-204ENST00000491798 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
C3orf58-204ENST00000491798 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
C3orf58-204ENST00000491798 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
C3orf58-204ENST00000491798 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
C3orf58-204ENST00000491798 DNMBPQ6XZF7 1577 aa30.16■■■□□ 2.42
C3orf58-204ENST00000491798 ABCC8Q09428 1581 aa30.12■■■□□ 2.41
C3orf58-204ENST00000491798 OSCARQ8IYS5 282 aa30.1■■■□□ 2.41
C3orf58-204ENST00000491798 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
C3orf58-204ENST00000491798 EIF4G3O43432 1585 aaKnown RBP30.02■■■□□ 2.4
C3orf58-204ENST00000491798 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
C3orf58-204ENST00000491798 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
C3orf58-204ENST00000491798 AQRO60306 1485 aaKnown RBP eCLIP29.94■■■□□ 2.38
C3orf58-204ENST00000491798 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
C3orf58-204ENST00000491798 RAD54L2Q9Y4B4 1467 aa29.91■■■□□ 2.38
C3orf58-204ENST00000491798 CUX1P39880 1505 aa29.85■■■□□ 2.37
C3orf58-204ENST00000491798 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
C3orf58-204ENST00000491798 SOGA1O94964 1423 aa29.82■■■□□ 2.36
C3orf58-204ENST00000491798 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
C3orf58-204ENST00000491798 CHD1O14646 1710 aa29.76■■■□□ 2.36
C3orf58-204ENST00000491798 RIMBP3CA6NJZ7 1639 aa29.76■■■□□ 2.35
C3orf58-204ENST00000491798 RIMBP3BA6NNM3 1639 aa29.76■■■□□ 2.35
C3orf58-204ENST00000491798 RIMBP3Q9UFD9 1639 aa29.76■■■□□ 2.35
C3orf58-204ENST00000491798 ARHGEF11O15085 1522 aa29.69■■■□□ 2.34
C3orf58-204ENST00000491798 FBLN2P98095 1184 aa29.67■■■□□ 2.34
C3orf58-204ENST00000491798 SNAPC4Q5SXM2 1469 aa29.63■■■□□ 2.33
C3orf58-204ENST00000491798 WDR97A6NE52 1622 aa29.61■■■□□ 2.33
C3orf58-204ENST00000491798 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
C3orf58-204ENST00000491798 MAGI1Q96QZ7 1491 aaPredicted RBP29.5■■■□□ 2.31
C3orf58-204ENST00000491798 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
C3orf58-204ENST00000491798 GAPVD1Q14C86 1478 aa29.47■■■□□ 2.31
C3orf58-204ENST00000491798 PBRM1Q86U86 1689 aa29.46■■■□□ 2.31
C3orf58-204ENST00000491798 CHMP7Q8WUX9 453 aaPredicted RBP29.45■■■□□ 2.31
C3orf58-204ENST00000491798 CYB5RLQ6IPT4 315 aa29.44■■■□□ 2.3
C3orf58-204ENST00000491798 ARAP1Q96P48 1450 aa29.43■■■□□ 2.3
C3orf58-204ENST00000491798 ABCA5Q8WWZ7 1642 aa29.43■■■□□ 2.3
C3orf58-204ENST00000491798 CLASP1Q7Z460 1538 aa29.42■■■□□ 2.3
C3orf58-204ENST00000491798 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
C3orf58-204ENST00000491798 SYNJ1O43426 1573 aa29.39■■■□□ 2.3
C3orf58-204ENST00000491798 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
C3orf58-204ENST00000491798 WRNQ14191 1432 aaPredicted RBP eCLIP29.37■■■□□ 2.29
C3orf58-204ENST00000491798 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
C3orf58-204ENST00000491798 ADAMTS12P58397 1594 aa29.21■■■□□ 2.27
C3orf58-204ENST00000491798 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
C3orf58-204ENST00000491798 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
C3orf58-204ENST00000491798 FHAD1B1AJZ9 1412 aa29.09■■■□□ 2.25
C3orf58-204ENST00000491798 NUP160Q12769 1436 aa29.08■■■□□ 2.25
C3orf58-204ENST00000491798 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
C3orf58-204ENST00000491798 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
C3orf58-204ENST00000491798 TRHP20396 242 aaPredicted RBP29.03■■■□□ 2.24
C3orf58-204ENST00000491798 SHROOM2Q13796 1616 aa28.92■■■□□ 2.22
C3orf58-204ENST00000491798 IGF1RP08069 1367 aa28.79■■■□□ 2.2
C3orf58-204ENST00000491798 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
C3orf58-204ENST00000491798 KIF27Q86VH2 1401 aa28.77■■■□□ 2.2
C3orf58-204ENST00000491798 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms