RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
PBX3-209ENST00000491787 CCDC180Q9P1Z9 1646 aa38.94■■■■□ 3.82
PBX3-209ENST00000491787 ABCC9O60706 1549 aa38.79■■■■□ 3.8
PBX3-209ENST00000491787 RB1CC1Q8TDY2 1594 aa37.01■■■■□ 3.52
PBX3-209ENST00000491787 NACADO15069 1562 aa36.82■■■■□ 3.48
PBX3-209ENST00000491787 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
PBX3-209ENST00000491787 DNAJC5BQ9UF47 199 aa36.45■■■■□ 3.43
PBX3-209ENST00000491787 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
PBX3-209ENST00000491787 UNC13AQ9UPW8 1703 aa36.22■■■■□ 3.39
PBX3-209ENST00000491787 PABPN1Q86U42 306 aaKnown RBP eCLIP36.14■■■■□ 3.38
PBX3-209ENST00000491787 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
PBX3-209ENST00000491787 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
PBX3-209ENST00000491787 DCAF1Q9Y4B6 1507 aa35.93■■■■□ 3.34
PBX3-209ENST00000491787 SHROOM4Q9ULL8 1493 aa35.53■■■■□ 3.28
PBX3-209ENST00000491787 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
PBX3-209ENST00000491787 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
PBX3-209ENST00000491787 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
PBX3-209ENST00000491787 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
PBX3-209ENST00000491787 NCAPD3P42695 1498 aa34.01■■■■□ 3.04
PBX3-209ENST00000491787 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
PBX3-209ENST00000491787 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
PBX3-209ENST00000491787 SMARCA2P51531 1590 aa33.77■■■■□ 3
PBX3-209ENST00000491787 HMGXB3Q12766 1538 aa33.73■■■□□ 2.99
PBX3-209ENST00000491787 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
PBX3-209ENST00000491787 PEG3Q9GZU2 1588 aa33.58■■■□□ 2.97
PBX3-209ENST00000491787 CUX2O14529 1486 aa33.49■■■□□ 2.95
PBX3-209ENST00000491787 BAZ1BQ9UIG0 1483 aaKnown RBP33.49■■■□□ 2.95
PBX3-209ENST00000491787 ERCC6Q03468 1493 aa33.46■■■□□ 2.95
PBX3-209ENST00000491787 DNAJC5Q9H3Z4 198 aa33.44■■■□□ 2.94
PBX3-209ENST00000491787 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
PBX3-209ENST00000491787 NESP48681 1621 aa33.37■■■□□ 2.93
PBX3-209ENST00000491787 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
PBX3-209ENST00000491787 THOC2Q8NI27 1593 aaKnown RBP33.04■■■□□ 2.88
PBX3-209ENST00000491787 WIZO95785 1651 aa33.02■■■□□ 2.88
PBX3-209ENST00000491787 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
PBX3-209ENST00000491787 CADPSQ9ULU8 1353 aa32.96■■■□□ 2.87
PBX3-209ENST00000491787 KIF21AQ7Z4S6 1674 aa32.94■■■□□ 2.86
PBX3-209ENST00000491787 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
PBX3-209ENST00000491787 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
PBX3-209ENST00000491787 WDR62O43379 1518 aa32.62■■■□□ 2.81
PBX3-209ENST00000491787 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
PBX3-209ENST00000491787 CFTRP13569 1480 aa32.6■■■□□ 2.81
PBX3-209ENST00000491787 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
PBX3-209ENST00000491787 FANCD2Q9BXW9 1451 aa32.53■■■□□ 2.8
PBX3-209ENST00000491787 URB2Q14146 1524 aaKnown RBP32.28■■■□□ 2.76
PBX3-209ENST00000491787 CCDC88BA6NC98 1476 aa32.27■■■□□ 2.76
PBX3-209ENST00000491787 PRDM2Q13029 1718 aa32.26■■■□□ 2.76
PBX3-209ENST00000491787 OSCARQ8IYS5 282 aa31.97■■■□□ 2.71
PBX3-209ENST00000491787 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
PBX3-209ENST00000491787 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
PBX3-209ENST00000491787 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
PBX3-209ENST00000491787 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
PBX3-209ENST00000491787 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
PBX3-209ENST00000491787 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
PBX3-209ENST00000491787 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
PBX3-209ENST00000491787 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
PBX3-209ENST00000491787 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
PBX3-209ENST00000491787 AQRO60306 1485 aaKnown RBP eCLIP31.57■■■□□ 2.64
PBX3-209ENST00000491787 RIMBP3CA6NJZ7 1639 aa31.51■■■□□ 2.63
PBX3-209ENST00000491787 RIMBP3BA6NNM3 1639 aa31.51■■■□□ 2.63
PBX3-209ENST00000491787 RIMBP3Q9UFD9 1639 aa31.51■■■□□ 2.63
PBX3-209ENST00000491787 RAD54L2Q9Y4B4 1467 aa31.47■■■□□ 2.63
PBX3-209ENST00000491787 SOGA1O94964 1423 aa31.47■■■□□ 2.63
PBX3-209ENST00000491787 CHD1O14646 1710 aa31.43■■■□□ 2.62
PBX3-209ENST00000491787 ARHGEF11O15085 1522 aa31.42■■■□□ 2.62
PBX3-209ENST00000491787 CUX1P39880 1505 aa31.41■■■□□ 2.62
PBX3-209ENST00000491787 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
PBX3-209ENST00000491787 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
PBX3-209ENST00000491787 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
PBX3-209ENST00000491787 FBLN2P98095 1184 aa31.27■■■□□ 2.6
PBX3-209ENST00000491787 SUPT5HO00267 1087 aaKnown RBP31.25■■■□□ 2.59
PBX3-209ENST00000491787 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
PBX3-209ENST00000491787 MAGI1Q96QZ7 1491 aaPredicted RBP31.2■■■□□ 2.58
PBX3-209ENST00000491787 GRIN2BQ13224 1484 aa31.19■■■□□ 2.58
PBX3-209ENST00000491787 CYB5RLQ6IPT4 315 aa31.17■■■□□ 2.58
PBX3-209ENST00000491787 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
PBX3-209ENST00000491787 CLASP1Q7Z460 1538 aa31.11■■■□□ 2.57
PBX3-209ENST00000491787 CHMP7Q8WUX9 453 aaPredicted RBP31.11■■■□□ 2.57
PBX3-209ENST00000491787 ABCA10Q8WWZ4 1543 aa31.1■■■□□ 2.57
PBX3-209ENST00000491787 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
PBX3-209ENST00000491787 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
PBX3-209ENST00000491787 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
PBX3-209ENST00000491787 PBRM1Q86U86 1689 aa31.05■■■□□ 2.56
PBX3-209ENST00000491787 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
PBX3-209ENST00000491787 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.54
PBX3-209ENST00000491787 BIVM-ERCC5R4GMW8 1640 aa30.94■■■□□ 2.54
PBX3-209ENST00000491787 TOP2BQ02880 1626 aa30.93■■■□□ 2.54
PBX3-209ENST00000491787 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
PBX3-209ENST00000491787 ADAMTS12P58397 1594 aa30.76■■■□□ 2.52
PBX3-209ENST00000491787 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
PBX3-209ENST00000491787 NUP160Q12769 1436 aa30.73■■■□□ 2.51
PBX3-209ENST00000491787 FHAD1B1AJZ9 1412 aa30.71■■■□□ 2.51
PBX3-209ENST00000491787 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
PBX3-209ENST00000491787 CEP170Q5SW79 1584 aa30.66■■■□□ 2.5
PBX3-209ENST00000491787 ERCC6L2Q5T890 1561 aa30.59■■■□□ 2.49
PBX3-209ENST00000491787 SHROOM2Q13796 1616 aa30.58■■■□□ 2.49
PBX3-209ENST00000491787 JPH4Q96JJ6 628 aa30.4■■■□□ 2.46
PBX3-209ENST00000491787 PRG4Q92954 1404 aaPredicted RBP30.36■■■□□ 2.45
PBX3-209ENST00000491787 IGF1RP08069 1367 aa30.35■■■□□ 2.45
PBX3-209ENST00000491787 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms