RNA–Protein interactions for RNA: ENST00000491776.1

CBS-216, Transcript of cystathionine-beta-synthase, humanhuman

TSL 3

Gene CBS, Length 1,515 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBS-216ENST00000491776 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
CBS-216ENST00000491776 CCDC180Q9P1Z9 1646 aa36.08■■■■□ 3.37
CBS-216ENST00000491776 ABCC9O60706 1549 aa35.03■■■■□ 3.2
CBS-216ENST00000491776 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
CBS-216ENST00000491776 NACADO15069 1562 aa33.83■■■■□ 3.01
CBS-216ENST00000491776 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
CBS-216ENST00000491776 MYO15BQ96JP2 1530 aa33.66■■■□□ 2.98
CBS-216ENST00000491776 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
CBS-216ENST00000491776 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
CBS-216ENST00000491776 UNC13AQ9UPW8 1703 aa33.15■■■□□ 2.9
CBS-216ENST00000491776 SCRIBQ14160 1630 aa32.81■■■□□ 2.84
CBS-216ENST00000491776 BICRAQ9NZM4 1560 aa32.78■■■□□ 2.84
CBS-216ENST00000491776 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.82
CBS-216ENST00000491776 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
CBS-216ENST00000491776 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
CBS-216ENST00000491776 EIF4G1Q04637 1599 aaKnown RBP31.92■■■□□ 2.7
CBS-216ENST00000491776 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.68
CBS-216ENST00000491776 CECR2Q9BXF3 1484 aa31.49■■■□□ 2.63
CBS-216ENST00000491776 SMARCA4P51532 1647 aa31.42■■■□□ 2.62
CBS-216ENST00000491776 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.62
CBS-216ENST00000491776 SMARCA2P51531 1590 aa31.2■■■□□ 2.59
CBS-216ENST00000491776 ATAD2BQ9ULI0 1458 aa31.16■■■□□ 2.58
CBS-216ENST00000491776 MROH2BQ7Z745 1585 aa31.15■■■□□ 2.58
CBS-216ENST00000491776 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
CBS-216ENST00000491776 PEG3Q9GZU2 1588 aa31.13■■■□□ 2.57
CBS-216ENST00000491776 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
CBS-216ENST00000491776 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
CBS-216ENST00000491776 WIZO95785 1651 aa30.85■■■□□ 2.53
CBS-216ENST00000491776 RSF1Q96T23 1441 aaPredicted RBP30.78■■■□□ 2.52
CBS-216ENST00000491776 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
CBS-216ENST00000491776 LAMC3Q9Y6N6 1575 aa30.38■■■□□ 2.45
CBS-216ENST00000491776 NESP48681 1621 aa30.33■■■□□ 2.45
CBS-216ENST00000491776 ERCC6Q03468 1493 aa30.22■■■□□ 2.43
CBS-216ENST00000491776 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.42
CBS-216ENST00000491776 CCDC88BA6NC98 1476 aa30.11■■■□□ 2.41
CBS-216ENST00000491776 KIF21AQ7Z4S6 1674 aa30.11■■■□□ 2.41
CBS-216ENST00000491776 PDS5BQ9NTI5 1447 aa30.09■■■□□ 2.41
CBS-216ENST00000491776 CFTRP13569 1480 aa30.07■■■□□ 2.4
CBS-216ENST00000491776 PRDM2Q13029 1718 aa30.06■■■□□ 2.4
CBS-216ENST00000491776 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
CBS-216ENST00000491776 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.38
CBS-216ENST00000491776 CUX2O14529 1486 aa29.93■■■□□ 2.38
CBS-216ENST00000491776 FANCD2Q9BXW9 1451 aa29.89■■■□□ 2.38
CBS-216ENST00000491776 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
CBS-216ENST00000491776 MRC2Q9UBG0 1479 aa29.81■■■□□ 2.36
CBS-216ENST00000491776 WDR62O43379 1518 aa29.75■■■□□ 2.35
CBS-216ENST00000491776 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
CBS-216ENST00000491776 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
CBS-216ENST00000491776 DNMBPQ6XZF7 1577 aa29.46■■■□□ 2.31
CBS-216ENST00000491776 TOPBP1Q92547 1522 aa29.44■■■□□ 2.3
CBS-216ENST00000491776 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
CBS-216ENST00000491776 CUX1P39880 1505 aa29.23■■■□□ 2.27
CBS-216ENST00000491776 POLA1P09884 1462 aaPredicted RBP29.18■■■□□ 2.26
CBS-216ENST00000491776 TARBP1Q13395 1621 aaKnown RBP29.15■■■□□ 2.26
CBS-216ENST00000491776 FGD5Q6ZNL6 1462 aa29.12■■■□□ 2.25
CBS-216ENST00000491776 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
CBS-216ENST00000491776 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
CBS-216ENST00000491776 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
CBS-216ENST00000491776 ZNF608Q9ULD9 1512 aaPredicted RBP29.05■■■□□ 2.24
CBS-216ENST00000491776 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
CBS-216ENST00000491776 SYNJ1O43426 1573 aa29.03■■■□□ 2.24
CBS-216ENST00000491776 SOGA1O94964 1423 aa29.01■■■□□ 2.23
CBS-216ENST00000491776 WDR97A6NE52 1622 aa29.01■■■□□ 2.23
CBS-216ENST00000491776 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
CBS-216ENST00000491776 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
CBS-216ENST00000491776 AQRO60306 1485 aaKnown RBP eCLIP28.86■■■□□ 2.21
CBS-216ENST00000491776 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
CBS-216ENST00000491776 TDRD9Q8NDG6 1382 aaKnown RBP28.8■■■□□ 2.2
CBS-216ENST00000491776 PBRM1Q86U86 1689 aa28.78■■■□□ 2.2
CBS-216ENST00000491776 DNAJC5Q9H3Z4 198 aa28.78■■■□□ 2.2
CBS-216ENST00000491776 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
CBS-216ENST00000491776 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
CBS-216ENST00000491776 CHD1O14646 1710 aa28.7■■■□□ 2.18
CBS-216ENST00000491776 MAGI1Q96QZ7 1491 aaPredicted RBP28.68■■■□□ 2.18
CBS-216ENST00000491776 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
CBS-216ENST00000491776 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
CBS-216ENST00000491776 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
CBS-216ENST00000491776 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
CBS-216ENST00000491776 ADAMTS12P58397 1594 aa28.51■■■□□ 2.16
CBS-216ENST00000491776 KIF27Q86VH2 1401 aa28.45■■■□□ 2.14
CBS-216ENST00000491776 FBLN2P98095 1184 aa28.44■■■□□ 2.14
CBS-216ENST00000491776 CHMP7Q8WUX9 453 aaPredicted RBP28.42■■■□□ 2.14
CBS-216ENST00000491776 FHAD1B1AJZ9 1412 aa28.4■■■□□ 2.14
CBS-216ENST00000491776 CUL7Q14999 1698 aa28.36■■■□□ 2.13
CBS-216ENST00000491776 GRIN2AQ12879 1464 aa28.36■■■□□ 2.13
CBS-216ENST00000491776 CLASP1Q7Z460 1538 aa28.34■■■□□ 2.13
CBS-216ENST00000491776 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
CBS-216ENST00000491776 IGF1RP08069 1367 aa28.25■■■□□ 2.11
CBS-216ENST00000491776 RIMBP3CA6NJZ7 1639 aa28.24■■■□□ 2.11
CBS-216ENST00000491776 RIMBP3BA6NNM3 1639 aa28.24■■■□□ 2.11
CBS-216ENST00000491776 RIMBP3Q9UFD9 1639 aa28.24■■■□□ 2.11
CBS-216ENST00000491776 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
CBS-216ENST00000491776 NUP160Q12769 1436 aa28.22■■■□□ 2.11
CBS-216ENST00000491776 ARHGEF11O15085 1522 aa28.2■■■□□ 2.11
CBS-216ENST00000491776 RUSC2Q8N2Y8 1516 aa28.14■■■□□ 2.1
CBS-216ENST00000491776 CARMIL1Q5VZK9 1371 aa28.11■■■□□ 2.09
CBS-216ENST00000491776 SHROOM2Q13796 1616 aa28.08■■■□□ 2.09
CBS-216ENST00000491776 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
CBS-216ENST00000491776 RAPGEF2Q9Y4G8 1499 aa28■■■□□ 2.07
CBS-216ENST00000491776 EEA1Q15075 1411 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms