RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
LCLAT1-211ENST00000491680 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
LCLAT1-211ENST00000491680 ABCC9O60706 1549 aa23.22■■□□□ 1.31
LCLAT1-211ENST00000491680 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
LCLAT1-211ENST00000491680 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
LCLAT1-211ENST00000491680 NACADO15069 1562 aa22.26■■□□□ 1.15
LCLAT1-211ENST00000491680 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.14
LCLAT1-211ENST00000491680 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
LCLAT1-211ENST00000491680 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
LCLAT1-211ENST00000491680 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
LCLAT1-211ENST00000491680 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
LCLAT1-211ENST00000491680 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
LCLAT1-211ENST00000491680 UNC13AQ9UPW8 1703 aa21.85■■□□□ 1.09
LCLAT1-211ENST00000491680 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
LCLAT1-211ENST00000491680 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
LCLAT1-211ENST00000491680 BICRAQ9NZM4 1560 aa21.6■■□□□ 1.05
LCLAT1-211ENST00000491680 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
LCLAT1-211ENST00000491680 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
LCLAT1-211ENST00000491680 DNAJC5Q9H3Z4 198 aa21.01■□□□□ 0.95
LCLAT1-211ENST00000491680 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
LCLAT1-211ENST00000491680 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
LCLAT1-211ENST00000491680 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
LCLAT1-211ENST00000491680 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
LCLAT1-211ENST00000491680 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
LCLAT1-211ENST00000491680 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.87
LCLAT1-211ENST00000491680 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
LCLAT1-211ENST00000491680 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
LCLAT1-211ENST00000491680 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
LCLAT1-211ENST00000491680 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
LCLAT1-211ENST00000491680 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
LCLAT1-211ENST00000491680 WIZO95785 1651 aa20.29■□□□□ 0.84
LCLAT1-211ENST00000491680 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
LCLAT1-211ENST00000491680 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
LCLAT1-211ENST00000491680 NESP48681 1621 aa20.06■□□□□ 0.8
LCLAT1-211ENST00000491680 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
LCLAT1-211ENST00000491680 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
LCLAT1-211ENST00000491680 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
LCLAT1-211ENST00000491680 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
LCLAT1-211ENST00000491680 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
LCLAT1-211ENST00000491680 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
LCLAT1-211ENST00000491680 CUX2O14529 1486 aa19.82■□□□□ 0.76
LCLAT1-211ENST00000491680 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
LCLAT1-211ENST00000491680 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
LCLAT1-211ENST00000491680 CFTRP13569 1480 aa19.78■□□□□ 0.76
LCLAT1-211ENST00000491680 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
LCLAT1-211ENST00000491680 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
LCLAT1-211ENST00000491680 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
LCLAT1-211ENST00000491680 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
LCLAT1-211ENST00000491680 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
LCLAT1-211ENST00000491680 WDR62O43379 1518 aa19.61■□□□□ 0.73
LCLAT1-211ENST00000491680 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
LCLAT1-211ENST00000491680 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
LCLAT1-211ENST00000491680 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
LCLAT1-211ENST00000491680 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
LCLAT1-211ENST00000491680 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
LCLAT1-211ENST00000491680 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
LCLAT1-211ENST00000491680 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
LCLAT1-211ENST00000491680 CUX1P39880 1505 aa19.21■□□□□ 0.67
LCLAT1-211ENST00000491680 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
LCLAT1-211ENST00000491680 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
LCLAT1-211ENST00000491680 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
LCLAT1-211ENST00000491680 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
LCLAT1-211ENST00000491680 SOGA1O94964 1423 aa19.14■□□□□ 0.65
LCLAT1-211ENST00000491680 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
LCLAT1-211ENST00000491680 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.65
LCLAT1-211ENST00000491680 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.64
LCLAT1-211ENST00000491680 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
LCLAT1-211ENST00000491680 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
LCLAT1-211ENST00000491680 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
LCLAT1-211ENST00000491680 WDR97A6NE52 1622 aa19.04■□□□□ 0.64
LCLAT1-211ENST00000491680 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
LCLAT1-211ENST00000491680 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
LCLAT1-211ENST00000491680 ABCA10Q8WWZ4 1543 aa18.96■□□□□ 0.63
LCLAT1-211ENST00000491680 CHD1O14646 1710 aa18.95■□□□□ 0.62
LCLAT1-211ENST00000491680 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
LCLAT1-211ENST00000491680 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
LCLAT1-211ENST00000491680 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
LCLAT1-211ENST00000491680 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
LCLAT1-211ENST00000491680 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
LCLAT1-211ENST00000491680 FBLN2P98095 1184 aa18.91■□□□□ 0.62
LCLAT1-211ENST00000491680 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
LCLAT1-211ENST00000491680 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
LCLAT1-211ENST00000491680 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
LCLAT1-211ENST00000491680 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
LCLAT1-211ENST00000491680 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
LCLAT1-211ENST00000491680 RIMBP3CA6NJZ7 1639 aa18.71■□□□□ 0.59
LCLAT1-211ENST00000491680 RIMBP3BA6NNM3 1639 aa18.71■□□□□ 0.59
LCLAT1-211ENST00000491680 RIMBP3Q9UFD9 1639 aa18.71■□□□□ 0.59
LCLAT1-211ENST00000491680 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.58
LCLAT1-211ENST00000491680 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
LCLAT1-211ENST00000491680 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
LCLAT1-211ENST00000491680 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
LCLAT1-211ENST00000491680 ARHGEF11O15085 1522 aa18.68■□□□□ 0.58
LCLAT1-211ENST00000491680 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
LCLAT1-211ENST00000491680 CUL7Q14999 1698 aa18.62■□□□□ 0.57
LCLAT1-211ENST00000491680 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
LCLAT1-211ENST00000491680 NUP160Q12769 1436 aa18.58■□□□□ 0.56
LCLAT1-211ENST00000491680 IGF1RP08069 1367 aa18.57■□□□□ 0.56
LCLAT1-211ENST00000491680 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
LCLAT1-211ENST00000491680 CYB5RLQ6IPT4 315 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms